Factsheet for HORVU7Hr1G074460.5

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	secretory
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G062760.2
HORVU3Hr1G029210.3
HORVU4Hr1G007240.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G13180.1	HORVU3Hr1G029210.3	AT1G29170.1	17267444
AT1G13180.1	HORVU2Hr1G062760.2	AT2G22640.1	17267444
AT1G13180.1	HORVU4Hr1G007240.3	AT3G27000.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G311700.1	Wheat	cytosol	95.41	95.41
TraesCS7B01G211500.1	Wheat	cytosol	95.18	95.18
TraesCS7D01G308200.1	Wheat	cytosol	95.64	92.46
KXG24330	Sorghum	cytosol	85.78	85.98
Zm00001d049629_P002	Maize	nucleus	70.18	83.15
Os08t0128300-01	Rice	cytosol	33.26	80.56
VIT_01s0137g00280.t01	Wine grape	cytosol	66.74	67.99
KRH59228	Soybean	nucleus	66.51	67.76
PGSC0003DMT400027956	Potato	cytosol	66.74	67.52
Solyc05g013940.2.1	Tomato	cytosol	66.28	67.37
Solyc04g024530.2.1	Tomato	cytosol	65.83	66.9
GSMUA_Achr8P01270_001	Banana	cytosol	65.37	66.74
AT1G13180.1	Thale cress	cytosol	65.14	66.51
CDX98005	Canola	cytosol	64.22	65.57
Bra019815.1-P	Field mustard	cytosol	64.22	65.57
HORVU6Hr1G053910.4	Barley	cytosol	66.28	65.38
Bra016738.1-P	Field mustard	cytosol	63.99	65.34
CDY21087	Canola	cytosol	63.99	65.34
CDY19392	Canola	cytosol	63.76	65.11
CDY34585	Canola	cytosol	63.53	64.87
KRH59222	Soybean	cytosol	26.61	60.42
HORVU5Hr1G117900.1	Barley	cytosol	31.65	36.6
HORVU1Hr1G047440.2	Barley	cytosol	31.19	36.07
HORVU1Hr1G074350.1	Barley	cytosol	30.28	35.11
HORVU1Hr1G002840.6	Barley	plasma membrane	32.11	34.4
HORVU4Hr1G008310.9	Barley	cytosol	31.88	34.15
HORVU3Hr1G083380.1	Barley	cytosol	30.28	33.85
HORVU5Hr1G000180.1	Barley	cytosol, nucleus	31.65	33.74
HORVU5Hr1G039850.3	Barley	mitochondrion	30.96	29.03
HORVU4Hr1G007240.3	Barley	cytosol	26.61	24.73
HORVU0Hr1G005770.1	Barley	cytosol	21.33	21.63
HORVU6Hr1G032610.8	Barley	cytosol	23.85	21.62
HORVU5Hr1G088030.1	Barley	plastid	24.77	21.26
HORVU5Hr1G102220.2	Barley	plastid	21.33	21.23

Protein Annotations

MapMan:20.2.2.1.2	Gene3D:3.30.420.40	Gene3D:3.90.640.10	UniProt:A0A287WWI0	InterPro:Actin	InterPro:Arp3
GO:GO:0000166	GO:GO:0000902	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005856	GO:GO:0005885
GO:GO:0007015	GO:GO:0008150	GO:GO:0009653	GO:GO:0009825	GO:GO:0009987	GO:GO:0010090
GO:GO:0016043	GO:GO:0016049	GO:GO:0030154	GO:GO:0034314	GO:GO:0040007	EnsemblPlantsGene:HORVU7Hr1G074460
EnsemblPlants:HORVU7Hr1G074460.5	PFAM:PF00022	PANTHER:PTHR11937	PANTHER:PTHR11937:SF258	SMART:SM00268	SUPFAM:SSF53067
UniParc:UPI000B471F50	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:426143237..426151728

Molecular Weight (calculated)

49049.9 Da

IEP (calculated)

5.165

GRAVY (calculated)

-0.220

Length

436 amino acids

Sequence
(BLAST)

001: LAHHTVSLHN LYALMFRYSK LGFAGNSEPS FTIPTVVAVN ESFLDQSEQC SSANWLAQYN AGVMADLDFF IGDEALSHFK SSGLYSLRSP IRHGQVNDWD
101: TMERFWQQSI FNYLRCNPEE HYFLLTDSPV STPESRECMG EIMFETFNVP GLYISVQSVL SLSAGFAYLK TLSEDDSDSV SDMTGVVVDI GDGAPHIVPV
201: VNGYVIGSSI KSFPLSGSDV TQFVMQLLQE RGELLPPDDA LDIARRVKET YCYTPSDIVK EFKKHDSKPS KYIKQWSAIK PKTGVPYTID IGYERFLGPE
301: IFFHPEMYSA DFSTPLPELI DSCVQSAPID TRRALYKNIV LSGGTTMFKD FHKRLQNNIK KIVDERVAET NARHRVEVNP VEVNVVTHPI QSYAVWFGGS
401: VAASSHEFFE CCHTKEDYEE HGASICRTST VFKGMY

Best Arabidopsis Sequence Match ( AT1G13180.1 )
(BLAST)

001: MDPTSRPAIV IDNGTGYTKM GFAGNVEPCF ILPTVVAVNE SFLNQSKSSS KATWQTQHNA GVAADLDFYI GDEALAKSRS SSTHNLHYPI EHGQVEDWDA
101: MERYWQQCIF NYLRCDPEDH YFLLTESPLT PPESREYTGE ILFETFNVPG LYIAVNSVLA LAAGYTTSKC EMTGVVVDVG DGATHVVPVA EGYVIGSCIK
201: SIPIAGKDVT LFIQQLMRER GENIPPEDSF DVARKVKEMY CYTCSDIVKE FNKHDKEPAK YIKQWKGVKP KTGAPYTCDV GYERFLGPEV FFNPEIYSND
301: FTTTLPAVID KCIQSAPIDT RRALYKNIVL SGGSTMFKDF GRRLQRDLKK IVDARVLANN ARTGGEITSQ PVEVNVVSHP VQRFAVWFGG SVLSSTPEFF
401: ASCRTKEEYE EYGASICRTN PVFKGMY

Arabidopsis Description

ARP3Actin-related protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAF1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.