Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU6Hr1G053910.4 | |
| HORVU7Hr1G074460.5 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G27000.1 | HORVU6Hr1G053910.4 | AT1G13180.1 | 17267444 |
| AT3G27000.1 | HORVU7Hr1G074460.5 | AT1G13180.1 | 17267444 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d022558_P001 | Maize | cytosol | 77.19 | 93.06 |
| TraesCS3D01G362400.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 76.97 | 92.8 |
| EER99952 | Sorghum | cytosol | 76.97 | 92.8 |
| TraesCS3A01G369400.1 | Wheat | cytosol | 76.12 | 89.25 |
| GSMUA_AchrUn_... | Banana | cytosol | 73.77 | 88.95 |
| VIT_14s0068g01630.t01 | Wine grape | cytosol | 72.07 | 86.89 |
| KRH06905 | Soybean | cytosol | 71.64 | 86.38 |
| KRG94584 | Soybean | cytosol | 71.64 | 86.38 |
| TraesCS3B01G401300.2 | Wheat | cytosol | 76.12 | 85.82 |
| Bra039097.1-P | Field mustard | cytosol | 70.79 | 85.35 |
| CDY20066 | Canola | cytosol | 70.79 | 85.35 |
| Bra025243.1-P | Field mustard | cytosol | 66.52 | 85.25 |
| AT3G27000.1 | Thale cress | cytosol | 70.58 | 85.09 |
| CDY00172 | Canola | cytosol | 70.58 | 85.09 |
| Solyc02g094320.2.1 | Tomato | cytosol | 70.58 | 85.09 |
| CDY13674 | Canola | cytosol | 70.79 | 84.05 |
| CDY52404 | Canola | cytosol | 70.79 | 84.05 |
| PGSC0003DMT400052197 | Potato | cytosol | 69.72 | 81.95 |
| HORVU5Hr1G117900.1 | Barley | cytosol | 35.39 | 44.03 |
| HORVU1Hr1G047440.2 | Barley | cytosol | 35.18 | 43.77 |
| HORVU1Hr1G074350.1 | Barley | cytosol | 34.33 | 42.82 |
| HORVU1Hr1G002840.6 | Barley | plasma membrane | 35.39 | 40.79 |
| HORVU4Hr1G008310.9 | Barley | cytosol | 34.97 | 40.29 |
| HORVU5Hr1G000180.1 | Barley | cytosol, nucleus | 34.75 | 39.85 |
| HORVU3Hr1G083380.1 | Barley | cytosol | 32.62 | 39.23 |
| HORVU5Hr1G039850.3 | Barley | mitochondrion | 34.33 | 34.62 |
| HORVU6Hr1G053910.4 | Barley | cytosol | 26.01 | 27.6 |
| HORVU7Hr1G074460.5 | Barley | cytosol | 24.73 | 26.61 |
| HORVU6Hr1G032610.8 | Barley | cytosol | 25.37 | 24.74 |
| HORVU5Hr1G088030.1 | Barley | plastid | 26.23 | 24.21 |
| HORVU0Hr1G005770.1 | Barley | cytosol | 21.11 | 23.02 |
| HORVU5Hr1G102220.2 | Barley | plastid | 21.11 | 22.6 |
Protein Annotations
| MapMan:20.2.2.1.1 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | UniProt:A0A287N358 | InterPro:Actin | InterPro:Arp2 |
| GO:GO:0000166 | GO:GO:0000902 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0005885 | GO:GO:0007015 | GO:GO:0008150 |
| GO:GO:0009653 | GO:GO:0009825 | GO:GO:0009987 | GO:GO:0010090 | GO:GO:0016043 | GO:GO:0016049 |
| GO:GO:0030154 | GO:GO:0034314 | GO:GO:0040007 | EnsemblPlantsGene:HORVU4Hr1G007240 | EnsemblPlants:HORVU4Hr1G007240.3 | PFAM:PF00022 |
| PRINTS:PR00190 | PANTHER:PTHR11937 | PANTHER:PTHR11937:SF149 | SMART:SM00268 | SUPFAM:SSF53067 | UniParc:UPI000B4631EF |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:19014461..19028650
Molecular Weight (calculated)
52436.4 Da
IEP (calculated)
6.691
GRAVY (calculated)
-0.195
Length
469 amino acids
Sequence
(BLAST)
(BLAST)
001: SPFRRPPSPT PTPSVELGEG GPARMESNKV VVCDNGTGYV KCGFAGENFP TSVFPCVVGR PLLRYEESLQ EQELTDIVVG AACADLRHQL DVSYPVTNGI
101: VQNWDDMGHI WDHAFYSELK VEPSECKILL TDPPLNPVKN REQMIETMFE KYNFSGVFIQ IQAVLSLYAQ GLLTGLVIDS GDGVTHVVPV VDGYSYPHLT
201: KRMNVAGRHI TSYLVDLLSR RGYAMNKSAD FETVREIKEK LCYISYDYKR EYQLGLETTI LVKSYTLPDG RVIKVGTERF QAPEALFTPE LIDVEGDGLA
301: DMAFHCIQEM DIDNRMTLYQ HIVLSGGSTM YPGLPSRLEK EILDRYLDVV LKGNKDGLKK LRLRIEDPPR RKHMVYLGGA VLAGIMKGCA GVLDHKAGVS
401: GRRCCLPKEV WTSITMYNVQ PSYLCYYSLS HNTKAFLIPH SVKTLLYHGS TKQGYCPPPP VPLEMAYSA
101: VQNWDDMGHI WDHAFYSELK VEPSECKILL TDPPLNPVKN REQMIETMFE KYNFSGVFIQ IQAVLSLYAQ GLLTGLVIDS GDGVTHVVPV VDGYSYPHLT
201: KRMNVAGRHI TSYLVDLLSR RGYAMNKSAD FETVREIKEK LCYISYDYKR EYQLGLETTI LVKSYTLPDG RVIKVGTERF QAPEALFTPE LIDVEGDGLA
301: DMAFHCIQEM DIDNRMTLYQ HIVLSGGSTM YPGLPSRLEK EILDRYLDVV LKGNKDGLKK LRLRIEDPPR RKHMVYLGGA VLAGIMKGCA GVLDHKAGVS
401: GRRCCLPKEV WTSITMYNVQ PSYLCYYSLS HNTKAFLIPH SVKTLLYHGS TKQGYCPPPP VPLEMAYSA
001: MDNKNVVVCD NGTGYVKCGF AGENFPTSVF PCVVGRPLLR YEESLMEQQV KDIVVGETCS ELRHQLDINY PVHNGIVQNW DDMEHVWDHA FYNELKINPS
101: DCKILLTDPP LNPSKNREKM IETMFEKYNF AGVFIQIQAV LTLYAQGLLT GLVIDSGDGV THVVPVVDGY SFPHLTKRMN VAGRHITAYL VDLLSRRGYA
201: MNKTADFETV REIKEKLCYI SYDYKRESQL GLETTILVKN YTLPDGRVIK VGTERFQAPE ALFTPELIDV EGDGMADMVF RCIQEMDIDN RMMLYQHIVL
301: SGGSTMYPGL PSRLEKEIQD RYLDTVLKGN KDGLKKLRLR IEDPPRRKHM VYLGGAVLAG IMKDAPEFWI NREDYMEEGI NCLNKMSQA
101: DCKILLTDPP LNPSKNREKM IETMFEKYNF AGVFIQIQAV LTLYAQGLLT GLVIDSGDGV THVVPVVDGY SFPHLTKRMN VAGRHITAYL VDLLSRRGYA
201: MNKTADFETV REIKEKLCYI SYDYKRESQL GLETTILVKN YTLPDGRVIK VGTERFQAPE ALFTPELIDV EGDGMADMVF RCIQEMDIDN RMMLYQHIVL
301: SGGSTMYPGL PSRLEKEIQD RYLDTVLKGN KDGLKKLRLR IEDPPRRKHM VYLGGAVLAG IMKDAPEFWI NREDYMEEGI NCLNKMSQA
Arabidopsis Description
ARP2Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSD6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.