Factsheet for Bra025243.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra016738.1-P
Bra019815.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G27000.1	Bra016738.1-P	AT1G13180.1	17267444
AT3G27000.1	Bra019815.1-P	AT1G13180.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039097.1-P	Field mustard	cytosol	98.36	92.55
CDY13674	Canola	cytosol	99.73	92.41
CDY52404	Canola	cytosol	99.45	92.15
AT3G27000.1	Thale cress	cytosol	97.54	91.77
KRH06905	Soybean	cytosol	92.62	87.15
KRG94584	Soybean	cytosol	92.35	86.89
VIT_14s0068g01630.t01	Wine grape	cytosol	92.08	86.63
Solyc02g094320.2.1	Tomato	cytosol	90.44	85.09
GSMUA_AchrUn_...	Banana	cytosol	89.62	84.32
Zm00001d022558_P001	Maize	cytosol	89.62	84.32
EER99952	Sorghum	cytosol	89.34	84.06
TraesCS3D01G362400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	86.34	81.23
PGSC0003DMT400052197	Potato	cytosol	86.34	79.2
TraesCS3A01G369400.1	Wheat	cytosol	86.07	78.75
TraesCS3B01G401300.2	Wheat	cytosol	85.79	75.48
HORVU4Hr1G007240.3	Barley	cytosol	85.25	66.52
Bra022356.1-P	Field mustard	cytosol	38.8	43.96
Bra009081.1-P	Field mustard	cytosol	41.8	43.34
Bra006033.1-P	Field mustard	cytosol	43.44	42.18
Bra007025.1-P	Field mustard	cytosol	43.17	41.91
Bra028615.1-P	Field mustard	cytosol	43.17	41.91
Bra014865.1-P	Field mustard	cytosol	43.17	41.91
Bra034778.1-P	Field mustard	cytosol	43.17	41.91
Bra005178.1-P	Field mustard	cytosol	40.44	41.81
Bra000010.1-P	Field mustard	cytosol	42.62	41.38
Bra018210.1-P	Field mustard	cytosol	42.62	41.38
Bra033819.1-P	Field mustard	cytosol	42.62	41.38
Bra017166.1-P	Field mustard	cytosol	42.35	41.11
Bra019486.1-P	Field mustard	cytosol	42.35	41.11
Bra003156.1-P	Field mustard	cytosol	22.95	40.78
Bra020319.1-P	Field mustard	cytosol	37.43	40.29
Bra006719.1-P	Field mustard	cytosol	36.34	40.06
Bra037560.1-P	Field mustard	cytoskeleton, cytosol	37.16	38.53
Bra016895.1-P	Field mustard	cytosol	31.42	37.95
Bra016738.1-P	Field mustard	cytosol	31.97	27.4
Bra019815.1-P	Field mustard	cytosol	31.69	27.17
Bra003429.1-P	Field mustard	cytosol	25.68	26.11
Bra002571.1-P	Field mustard	nucleus	42.62	25.79
Bra030818.1-P	Field mustard	cytosol	12.57	20.72
Bra007566.1-P	Field mustard	cytosol	18.31	20.43
Bra019816.1-P	Field mustard	nucleus	10.11	9.81

Protein Annotations

Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	InterPro:Actin	InterPro:Arp2	EnsemblPlantsGene:Bra025243
EnsemblPlants:Bra025243.1	EnsemblPlants:Bra025243.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005885	GO:GO:0007015
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0034314	UniProt:M4E8Y7	PFAM:PF00022
PRINTS:PR00190	PANTHER:PTHR11937	PANTHER:PTHR11937:SF149	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI000253F61C

Description

AT3G27000 (E=5e-115) ARP2, ATARP2, WRM | ARP2 (ACTIN RELATED PROTEIN 2); protein binding / structural constituent of cytoskeleton

Coordinates

chrA06:+:22603255..22605879

Molecular Weight (calculated)

41561.3 Da

IEP (calculated)

5.175

GRAVY (calculated)

-0.255

Length

366 amino acids

Sequence
(BLAST)

001: MDNKNVVVCD NGTGYVKCGF AGENFPTSVF PCVVGRPLLR YEESLMEQQL KDIVVGETCA ELRHQLDINY PVHNGIVQNW EDMEHVWDHA FYNELKINPS
101: ECKILLTDPP LNPSKNREKM IETMFEKYNF AGVFIQIQAV LTLYAQGLLT GLVIDSGDGV THVVPVVDGY SFPHLTKRMN VAGRHITAYL VDLLSRRGYD
201: YKRECELGLE TTILVKNYTL PDGRVIKVGT ERFQAPEALF TPELIDVEGD GMADMVFRCI QEMDIDNRMT LYQHIVLSGG STMYPGLPSR LEKEIQDRYL
301: DTVLKGNKDG LKKLRLRIED PPRRKHMVYL GGAVLAGIMK DAPEFWINRE DYLEEGIGCL NKMSQA

Best Arabidopsis Sequence Match ( AT3G27000.1 )
(BLAST)

001: MDNKNVVVCD NGTGYVKCGF AGENFPTSVF PCVVGRPLLR YEESLMEQQV KDIVVGETCS ELRHQLDINY PVHNGIVQNW DDMEHVWDHA FYNELKINPS
101: DCKILLTDPP LNPSKNREKM IETMFEKYNF AGVFIQIQAV LTLYAQGLLT GLVIDSGDGV THVVPVVDGY SFPHLTKRMN VAGRHITAYL VDLLSRRGYA
201: MNKTADFETV REIKEKLCYI SYDYKRESQL GLETTILVKN YTLPDGRVIK VGTERFQAPE ALFTPELIDV EGDGMADMVF RCIQEMDIDN RMMLYQHIVL
301: SGGSTMYPGL PSRLEKEIQD RYLDTVLKGN KDGLKKLRLR IEDPPRRKHM VYLGGAVLAG IMKDAPEFWI NREDYMEEGI NCLNKMSQA

Arabidopsis Description

ARP2Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.