Factsheet for Bra034778.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01102	Canola	cytosol	99.73	99.73
CDY08455	Canola	cytosol	99.47	99.47
AT3G12110.1	Thale cress	cytosol	99.2	99.2
VIT_13s0019g01240.t01	Wine grape	cytosol	96.82	96.82
KRH29804	Soybean	endoplasmic reticulum, mitochondrion, nucleus	96.82	96.82
VIT_06s0004g04570.t01	Wine grape	cytosol	96.55	96.81
GSMUA_Achr10P...	Banana	cytosol	67.37	96.58
KRH38098	Soybean	cytosol	96.55	96.55
KRH01660	Soybean	mitochondrion, nucleus	96.55	96.55
KRH10268	Soybean	mitochondrion, nucleus	96.55	96.55
KRH70465	Soybean	mitochondrion, nucleus	96.55	96.55
KRH71847	Soybean	endoplasmic reticulum, nucleus	96.55	96.55
GSMUA_AchrUn_...	Banana	plasma membrane	96.29	96.29
VIT_08s0007g06520.t01	Wine grape	cytosol	96.29	96.29
KRH56507	Soybean	endoplasmic reticulum, mitochondrion	96.02	96.02
Bra014865.1-P	Field mustard	cytosol	96.02	96.02
Bra018210.1-P	Field mustard	cytosol	96.02	96.02
KRH23061	Soybean	endoplasmic reticulum, mitochondrion, nucleus	96.02	96.02
Bra020319.1-P	Field mustard	cytosol	86.47	95.88
Bra019486.1-P	Field mustard	cytosol	95.76	95.76
Bra033819.1-P	Field mustard	cytosol	95.76	95.76
KRG93168	Soybean	mitochondrion, nucleus	95.76	95.76
KRG95386	Soybean	cytosol	95.76	95.76
KRH67068	Soybean	endoplasmic reticulum, mitochondrion, nucleus	95.76	95.76
Bra007025.1-P	Field mustard	cytosol	95.76	95.76
Bra028615.1-P	Field mustard	cytosol	95.49	95.49
Bra006719.1-P	Field mustard	cytosol	84.08	95.48
Bra017166.1-P	Field mustard	cytosol	94.96	94.96
Bra000010.1-P	Field mustard	cytosol	94.69	94.69
Bra009081.1-P	Field mustard	cytosol	88.59	94.62
Bra006033.1-P	Field mustard	cytosol	94.43	94.43
Bra005178.1-P	Field mustard	cytosol	88.33	94.07
PGSC0003DMT400023026	Potato	cytosol	93.9	93.9
PGSC0003DMT400049429	Potato	cytosol	93.1	93.1
Solyc10g086460.1.1	Tomato	unclear	92.84	92.84
GSMUA_Achr7P18630_001	Banana	cytosol	78.51	92.5
Bra022356.1-P	Field mustard	cytosol	78.25	91.33
Bra003156.1-P	Field mustard	cytosol	48.28	88.35
Solyc09g010750.1.1	Tomato	cytosol	40.58	85.47
KRH24799	Soybean	cytosol	92.31	84.88
Bra037560.1-P	Field mustard	cytoskeleton, cytosol	77.98	83.29
Bra016895.1-P	Field mustard	cytosol	62.07	77.23
Bra002571.1-P	Field mustard	nucleus	95.76	59.67
Bra039097.1-P	Field mustard	cytosol	44.56	43.19
Bra025243.1-P	Field mustard	cytosol	41.91	43.17
Bra003429.1-P	Field mustard	cytosol	37.67	39.44
Bra016738.1-P	Field mustard	cytosol	38.2	33.72
Bra019815.1-P	Field mustard	cytosol	37.67	33.26
Bra007566.1-P	Field mustard	cytosol	28.91	33.23
Bra030818.1-P	Field mustard	cytosol	16.45	27.93
Bra019816.1-P	Field mustard	nucleus	11.14	11.14

Protein Annotations

MapMan:20.2.1	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Actin	InterPro:Actin/actin-like_CS	InterPro:Actin_CS
EnsemblPlantsGene:Bra034778	EnsemblPlants:Bra034778.1	EnsemblPlants:Bra034778.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005886	GO:GO:0009506	GO:GO:0009536	GO:GO:0009570	GO:GO:0009941	GO:GO:0016020
UniProt:M4F133	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406	ScanProsite:PS00432	ScanProsite:PS01132
PANTHER:PTHR11937	PANTHER:PTHR11937:SF276	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI000254747D	:

Description

AT3G12110 (E=5e-219) ACT11 | ACT11 (actin-11); structural constituent of cytoskeleton

Coordinates

chrA05:-:21375809..21377531

Molecular Weight (calculated)

41691.0 Da

IEP (calculated)

5.047

GRAVY (calculated)

-0.181

Length

377 amino acids

Sequence
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTTAEREI VRDVKEKLAY IALDYEQEME TANTSSSVDK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDETGPS IVHRKCF

Best Arabidopsis Sequence Match ( AT3G12110.1 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTSAEREI VRDVKEKLAY IALDYEQEME TANTSSSVEK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Arabidopsis Description

ACT11Actin-11 [Source:UniProtKB/Swiss-Prot;Acc:P53496]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.