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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, mitochondrion
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_06s0004g04570.t01
VIT_07s0031g00460.t01
VIT_08s0007g06520.t01
VIT_13s0019g01240.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37620.1 VIT_07s0031g00460.t01 AT2G23420.1 21798944
AT2G37620.1 VIT_06s0004g04570.t01 AT2G37620.1 21798944
AT2G37620.1 VIT_08s0007g06520.t01 AT2G37620.1 21798944
AT2G37620.1 VIT_13s0019g01240.t01 AT2G37620.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g011500.2.1 Tomato extracellular, nucleus, plastid, unclear 97.61 97.61
KRH01660 Soybean mitochondrion, nucleus 97.35 97.35
KRH70465 Soybean mitochondrion, nucleus 97.35 97.35
PGSC0003DMT400060225 Potato cytosol 97.35 97.35
PGSC0003DMT400071331 Potato cytosol 97.35 97.35
PGSC0003DMT400077954 Potato cytosol 97.35 97.35
AT3G12110.1 Thale cress cytosol 97.08 97.08
CDX99111 Canola cytosol 97.08 97.08
CDX88698 Canola cytosol 97.08 97.08
CDX86081 Canola cytosol 97.08 97.08
CDX71119 Canola cytosol 97.08 97.08
Bra018210.1-P Field mustard cytosol 97.08 97.08
Solyc05g054480.2.1 Tomato extracellular, nucleus, plastid, unclear 97.08 97.08
AT3G46520.2 Thale cress cytosol 97.08 97.08
VIT_08s0007g06520.t01 Wine grape cytosol 97.08 97.08
VIT_06s0004g04570.t01 Wine grape cytosol 96.82 97.07
Bra006719.1-P Field mustard cytosol 85.41 96.99
GSMUA_Achr10P... Banana cytosol 67.64 96.96
CDY38066 Canola cytosol 96.82 96.82
CDX82985 Canola cytosol 96.82 96.82
CDY21777 Canola cytosol 96.82 96.82
GSMUA_AchrUn_... Banana plasma membrane 96.82 96.82
CDY01102 Canola cytosol 96.82 96.82
AT5G59370.2 Thale cress cytosol 96.82 96.82
KRH56507 Soybean endoplasmic reticulum, mitochondrion 96.82 96.82
Bra034778.1-P Field mustard cytosol 96.82 96.82
Bra033819.1-P Field mustard cytosol 96.82 96.82
Solyc06g076090.2.1 Tomato unclear 96.82 96.82
Bra019486.1-P Field mustard cytosol 96.82 96.82
CDY08455 Canola cytosol 96.55 96.55
CDY53444 Canola cytosol 96.55 96.55
KRG93168 Soybean mitochondrion, nucleus 96.55 96.55
Solyc11g065990.1.1 Tomato nucleus, plastid, unclear 96.55 96.55
Bra020319.1-P Field mustard cytosol 87.0 96.47
CDY48688 Canola cytosol 87.0 96.47
AT2G37620.1 Thale cress cytosol 96.29 96.29
AT3G53750.2 Thale cress cytosol 96.29 96.29
VIT_12s0178g00200.t01 Wine grape cytosol 96.02 96.02
CDX76191 Canola cytosol 96.02 96.02
CDX78202 Canola cytosol 96.02 96.02
Bra000010.1-P Field mustard cytosol 96.02 96.02
Bra014865.1-P Field mustard cytosol 96.02 96.02
Bra007025.1-P Field mustard cytosol 96.02 96.02
PGSC0003DMT400001169 Potato cytosol 96.02 95.77
Bra017166.1-P Field mustard cytosol 95.76 95.76
CDX91373 Canola cytosol 95.76 95.76
CDX74944 Canola cytosol 95.76 95.76
CDX73527 Canola cytosol 89.66 95.75
CDY30846 Canola cytosol 95.49 95.49
CDY65255 Canola cytosol 83.82 95.47
CDX93360 Canola cytosol 83.82 95.47
CDY07779 Canola cytosol 89.12 95.45
Bra005178.1-P Field mustard cytosol 89.12 94.92
GSMUA_Achr7P18630_001 Banana cytosol 78.78 92.81
CDX94448 Canola cytosol 93.1 90.7
CDX79746 Canola cytosol 89.12 90.32
Bra003156.1-P Field mustard cytosol 48.54 88.83
VIT_04s0044g00580.t01 Wine grape extracellular 96.02 78.7
CDY71336 Canola cytosol 55.17 75.64
CDX67573 Canola cytosol 55.17 68.42
VIT_11s0016g00770.t01 Wine grape cytosol 67.64 67.82
Bra002571.1-P Field mustard nucleus 96.82 60.33
CDY33033 Canola nucleus 79.31 55.27
CDX80274 Canola nucleus 77.98 53.55
VIT_14s0068g01630.t01 Wine grape cytosol 44.3 42.93
VIT_13s0064g00730.t01 Wine grape cytosol 37.67 39.34
VIT_01s0137g00280.t01 Wine grape cytosol 38.99 34.35
VIT_00s0214g00170.t01 Wine grape cytosol 14.59 31.43
VIT_17s0000g04010.t01 Wine grape mitochondrion 34.48 29.41
VIT_11s0016g05490.t01 Wine grape cytosol 32.36 28.18
Protein Annotations
EntrezGene:100244452wikigene:100244452MapMan:20.2.1Gene3D:3.30.420.40Gene3D:3.90.640.10UniProt:A5BXV1
EMBL:AM475102InterPro:ActinInterPro:Actin/actin-like_CSInterPro:Actin_CSProteinID:CAN83697ProteinID:CAN83697.1
ProteinID:CBI31677ProteinID:CBI31677.3EMBL:FN595998GO:GO:0000166GO:GO:0003674GO:GO:0005488
GO:GO:0005524EntrezGene:LOC100244452wikigene:LOC100244452PFAM:PF00022PRINTS:PR00190ScanProsite:PS00406
ScanProsite:PS00432ScanProsite:PS01132PANTHER:PTHR11937PANTHER:PTHR11937:SF276SMART:SM00268SUPFAM:SSF53067
UniParc:UPI0001524996ArrayExpress:VIT_13s0019g01240EnsemblPlantsGene:VIT_13s0019g01240EnsemblPlants:VIT_13s0019g01240.t01unigene:Vvi.2439RefSeq:XP_002283590
RefSeq:XP_002283590.1RefSeq:XP_010658578.1RefSeq:XP_010658580.1RefSeq:XP_019080143.1::
Description
No Description!
Coordinates
chr13:-:2881125..2883034
Molecular Weight (calculated)
41817.2 Da
IEP (calculated)
5.162
GRAVY (calculated)
-0.199
Length
377 amino acids
Sequence
(BLAST)
001: MADGEDVQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY MMKILTERGY
201: SFTTTAEREI VRDMKEKLSY IALDYEQELE TAKTSSSVEK SYELPDGQVI TIGAERFRCP EVLFQPSFIG MEASGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Best Arabidopsis Sequence Match ( AT3G12110.1 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTSAEREI VRDVKEKLAY IALDYEQEME TANTSSSVEK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT11Actin-11 [Source:UniProtKB/Swiss-Prot;Acc:P53496]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.