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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003156.1-P Field mustard cytosol 66.45 98.06
CDY07779 Canola cytosol 70.72 61.08
CDY48688 Canola cytosol 67.43 60.29
CDY65255 Canola cytosol 65.13 59.82
CDX92271 Canola cytosol 62.17 59.62
CDX93360 Canola cytosol 64.47 59.21
AT3G53750.2 Thale cress cytosol 72.04 58.09
CDX76191 Canola cytosol 71.71 57.82
CDX78202 Canola cytosol 71.71 57.82
CDX79746 Canola cytosol 70.72 57.8
CDX73527 Canola cytosol 67.11 57.79
CDY30846 Canola cytosol 71.05 57.29
GSMUA_AchrUn_... Banana plasma membrane 70.72 57.03
CDX74944 Canola cytosol 70.39 56.76
CDX91373 Canola cytosol 70.39 56.76
KRG93168 Soybean mitochondrion, nucleus 69.74 56.23
KRH10268 Soybean mitochondrion, nucleus 69.74 56.23
KRH29804 Soybean endoplasmic reticulum, mitochondrion, nucleus 69.74 56.23
KRH56507 Soybean endoplasmic reticulum, mitochondrion 69.74 56.23
KRH38098 Soybean cytosol 69.41 55.97
CDX82985 Canola cytosol 69.41 55.97
VIT_06s0004g04570.t01 Wine grape cytosol 69.08 55.85
CDY53444 Canola cytosol 69.08 55.7
CDX88698 Canola cytosol 69.08 55.7
CDY38066 Canola cytosol 69.08 55.7
CDX99111 Canola cytosol 69.08 55.7
CDY21777 Canola cytosol 69.08 55.7
KRH23061 Soybean endoplasmic reticulum, mitochondrion, nucleus 69.08 55.7
CDX86081 Canola cytosol 69.08 55.7
KRH71847 Soybean endoplasmic reticulum, nucleus 69.08 55.7
CDX71119 Canola cytosol 69.08 55.7
VIT_08s0007g06520.t01 Wine grape cytosol 69.08 55.7
KRH01660 Soybean mitochondrion, nucleus 68.75 55.44
KRH67068 Soybean endoplasmic reticulum, mitochondrion, nucleus 68.75 55.44
KRH70465 Soybean mitochondrion, nucleus 68.75 55.44
KRG95386 Soybean cytosol 68.42 55.17
VIT_13s0019g01240.t01 Wine grape cytosol 68.42 55.17
CDY21607 Canola cytosol 68.42 55.17
CDX69885 Canola cytosol 68.42 55.17
CDX85794 Canola cytosol 63.82 54.96
CDY30296 Canola cytosol 63.82 54.96
CDY40061 Canola cytosol 63.82 54.96
CDY31972 Canola cytosol 63.82 54.96
CDX81140 Canola cytosol 67.76 54.64
CDY56544 Canola cytosol 67.76 54.64
CDX94448 Canola cytosol 69.41 54.52
CDY01102 Canola cytosol 67.43 54.38
CDY08455 Canola cytosol 67.43 54.38
PGSC0003DMT400023026 Potato cytosol 66.78 53.85
Solyc09g010750.1.1 Tomato cytosol 31.58 53.63
Solyc10g086460.1.1 Tomato unclear 66.12 53.32
PGSC0003DMT400049429 Potato cytosol 66.12 53.32
CDX95498 Canola cytosol 64.8 52.25
CDX87810 Canola cytosol 64.8 52.25
CDX92272 Canola cytosol 64.8 52.25
CDY61982 Canola cytosol 64.8 52.25
CDY18545 Canola cytosol 64.8 52.25
CDX82326 Canola cytosol 64.47 51.99
KRH24799 Soybean cytosol 69.41 51.46
GSMUA_Achr7P18630_001 Banana cytosol 53.62 50.94
CDX99315 Canola cytosol 52.96 49.85
GSMUA_Achr10P... Banana cytosol 42.11 48.67
CDY71336 Canola cytosol 43.75 48.36
CDY14813 Canola cytosol 48.68 42.17
CDY06885 Canola cytosol 44.74 41.09
CDY33033 Canola nucleus 63.49 35.67
CDX80274 Canola nucleus 62.5 34.61
CDY00172 Canola cytosol 36.18 28.28
CDY20066 Canola cytosol 36.18 28.28
CDY52404 Canola cytosol 36.51 28.1
CDY13674 Canola cytosol 36.51 28.1
CDX71774 Canola cytosol 27.3 23.25
CDX96721 Canola cytosol 33.22 23.06
CDX83847 Canola cytosol 33.22 23.01
CDY62715 Canola cytosol 27.3 22.86
CDY26159 Canola cytosol 33.22 22.85
CDY19213 Canola cytosol 33.22 22.85
CDX67843 Canola cytosol 26.97 22.78
CDY56730 Canola cytosol 26.97 22.78
CDY52344 Canola cytosol 27.96 21.09
CDY21087 Canola cytosol 28.29 20.14
CDY34585 Canola cytosol 27.96 19.91
CDX98005 Canola cytosol 27.63 19.67
CDY19392 Canola cytosol 27.3 19.44
CDY42404 Canola cytosol 22.37 15.93
Protein Annotations
EnsemblPlants:CDX67573EnsemblPlantsGene:GSBRNA2T00098709001Gene3D:3.30.420.40Gene3D:3.90.640.10GO:A0A078BX85InterPro:Actin
PANTHER:PTHR11937PANTHER:PTHR11937:SF355PFAM:PF00022PRINTS:PR00190ProteinID:CDX67573ProteinID:CDX67573.1
SEG:segSMART:SM00268SUPFAM:SSF53067TMHMM:TMhelixUniParc:UPI0004EF2239MapMan:35.1
Description
BnaA07g16130D
Coordinates
chrLK031787:+:1037813..1039256
Molecular Weight (calculated)
33665.6 Da
IEP (calculated)
4.700
GRAVY (calculated)
0.089
Length
304 amino acids
Sequence
(BLAST)
001: MADGEDIQPL VCDNGTGMIK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDACVGDEA HSPSVLSVAP EEHPIRLTEA PLNPKANREK MTQIMFETFN
101: ALAMYVAIQA VLSLYASGRT TGIVLDSGDG RDLTDALMKI LTERGYSFTT TAEREIVRDI KEKLCYIALD YEQELETSKT SSSVEKNYEL PDGQVITIGS
201: ERFRCPEVLY QPSMIEEILC LDWRIYLGIS QAHRLSTVNA FEFEVKSASG EALVVFQFIF FLCCSSLFSD SGLRHFKKLA VSLCSIVNKI LLLLFFCWIA
301: QLCE
Best Arabidopsis Sequence Match ( AT2G37620.1 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.