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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra022356.1-P Field mustard cytosol 98.45 98.45
Zm00001d019635_P001 Maize cytosol 38.7 90.58
Zm00001d016605_P001 Maize cytosol 42.11 86.08
CDX92272 Canola cytosol 99.38 85.15
CDX95498 Canola cytosol 99.38 85.15
CDY18545 Canola cytosol 99.38 85.15
CDX82326 Canola cytosol 99.07 84.88
CDY61982 Canola cytosol 99.07 84.88
Zm00001d016508_P001 Maize cytosol 34.98 81.88
CDX92271 Canola cytosol 79.88 81.39
CDY01102 Canola cytosol 92.26 79.05
KRH64098 Soybean cytosol 92.26 79.05
CDY08455 Canola cytosol 91.95 78.78
EES08028 Sorghum cytosol 91.95 78.78
KRH43389 Soybean cytosol 91.95 78.78
KRH59535 Soybean cytosol 91.95 78.78
Os05t0106600-01 Rice nucleus 91.95 78.78
PGSC0003DMT400010174 Potato cytosol 91.95 78.78
PGSC0003DMT400047481 Potato cytosol 91.95 78.78
Solyc03g078400.2.1 Tomato nucleus, plastid 91.95 78.78
Solyc11g005330.1.1 Tomato nucleus 91.95 78.78
Zm00001d053177_P004 Maize cytosol 91.95 78.78
GSMUA_Achr9P03170_001 Banana cytosol 91.64 78.72
CDX69885 Canola cytosol 91.64 78.51
CDX87810 Canola cytosol 91.64 78.51
CDY21607 Canola cytosol 91.64 78.51
GSMUA_Achr6P25350_001 Banana cytosol 91.64 78.51
HORVU5Hr1G117900.1 Barley cytosol 91.64 78.51
TraesCS5B01G124100.1 Wheat cytosol 91.64 78.51
TraesCS5B01G516100.1 Wheat cytosol 91.64 78.51
TraesCS5D01G516200.1 Wheat cytosol 91.64 78.51
CDX81140 Canola cytosol 91.33 78.25
CDY56544 Canola cytosol 91.33 78.25
GSMUA_Achr10P... Banana cytosol 91.33 78.25
GSMUA_Achr2P16160_001 Banana cytosol 91.33 78.25
GSMUA_Achr7P10410_001 Banana cytosol 91.33 78.25
GSMUA_Achr8P02660_001 Banana cytosol 91.33 78.25
KXG21029 Sorghum cytosol 91.33 78.25
KXG23031 Sorghum cytosol 91.33 78.25
Os01t0964133-01 Rice plasma membrane 91.33 78.25
Os11t0163100-01 Rice nucleus, plasma membrane, plastid 91.33 78.25
TraesCS1B01G024500.1 Wheat golgi, nucleus 91.33 78.25
TraesCS1D01G020000.1 Wheat cytosol 91.33 78.25
Zm00001d011086_P005 Maize cytosol 91.33 78.25
Zm00001d035720_P002 Maize cytosol 91.33 78.25
TraesCS4A01G356100.2 Wheat cytosol 91.64 78.1
CDY30846 Canola cytosol 91.02 77.98
GSMUA_Achr3P02960_001 Banana cytosol 91.02 77.98
Zm00001d019396_P001 Maize cytosol 40.56 77.98
CDX71119 Canola cytosol 90.71 77.72
CDX74944 Canola cytosol 90.71 77.72
CDX76191 Canola cytosol 90.71 77.72
CDX82985 Canola cytosol 90.71 77.72
CDX86081 Canola cytosol 90.71 77.72
CDX88698 Canola cytosol 90.71 77.72
CDX91373 Canola cytosol 90.71 77.72
CDX99111 Canola cytosol 90.71 77.72
CDY21777 Canola cytosol 90.71 77.72
CDY38066 Canola cytosol 90.71 77.72
EER90564 Sorghum cytosol 90.71 77.72
GSMUA_Achr11P... Banana cytosol 90.71 77.72
GSMUA_Achr8P16150_001 Banana cytosol 90.71 77.72
Os03t0836000-01 Rice plasma membrane, plastid 90.71 77.72
KRH53856 Soybean endoplasmic reticulum, mitochondrion 79.88 77.71
CDX85794 Canola cytosol 84.83 77.62
CDY40061 Canola cytosol 84.83 77.62
CDX78202 Canola cytosol 90.4 77.45
CDY53444 Canola cytosol 90.4 77.45
Zm00001d012277_P001 Maize cytosol 90.09 77.39
GSMUA_Achr9P08850_001 Banana cytosol 83.59 77.36
EES01810 Sorghum cytosol 89.78 77.13
CDY30296 Canola cytosol 84.21 77.05
CDY31972 Canola cytosol 84.21 77.05
GSMUA_Achr5P29190_001 Banana cytosol 82.97 77.01
Zm00001d035722_P007 Maize plasma membrane 91.33 76.62
GSMUA_Achr11P... Banana cytosol 82.66 76.5
Os05t0438800-01 Rice plasma membrane, plastid 88.85 76.33
Zm00001d042731_P002 Maize extracellular, plasma membrane, plastid 88.85 76.33
CDX73527 Canola cytosol 83.28 76.2
CDY07779 Canola cytosol 82.97 76.14
HORVU1Hr1G074350.1 Barley cytosol 88.54 76.06
TraesCS1A01G274400.1 Wheat golgi 88.54 76.06
TraesCS1B01G283900.1 Wheat cytosol 88.54 76.06
TraesCS1D01G274400.1 Wheat cytosol 88.54 76.06
CDY48688 Canola cytosol 79.88 75.88
EES19603 Sorghum cytosol 88.24 75.8
TraesCS5D01G132200.1 Wheat golgi 87.0 75.74
Zm00001d010159_P002 Maize extracellular, plasma membrane 87.31 75.0
CDX93360 Canola cytosol 76.78 74.92
GSMUA_Achr10P... Banana cytosol 63.78 74.91
Zm00001d034761_P002 Maize cytosol 90.71 74.74
CDY65255 Canola cytosol 76.47 74.62
CDX94448 Canola cytosol 88.24 73.64
HORVU1Hr1G002840.6 Barley plasma membrane 91.33 72.48
TraesCS1A01G020500.2 Wheat cytosol 91.33 72.48
TraesCS5A01G124300.2 Wheat golgi 91.64 72.37
CDX79746 Canola cytosol 82.97 72.04
GSMUA_Achr6P34320_001 Banana cytosol 53.56 70.9
KXG21030 Sorghum cytosol 81.11 67.35
GSMUA_Achr2P08030_001 Banana cytosol 72.76 67.14
Os01t0866100-01 Rice plasma membrane 42.11 67.0
Zm00001d011087_P001 Maize plastid 91.33 64.98
Zm00001d008746_P001 Maize cytosol 55.11 64.73
VIT_04s0044g00580.t01 Wine grape extracellular 91.95 64.57
Zm00001d003298_P001 Maize cytosol 52.01 63.88
Zm00001d004087_P001 Maize cytosol 40.87 61.11
HORVU5Hr1G039850.3 Barley mitochondrion 87.93 61.08
CDY14813 Canola cytosol 65.33 60.11
Zm00001d007792_P001 Maize cytosol 47.99 58.71
CDY06885 Canola cytosol 58.51 57.1
CDY71336 Canola cytosol 47.68 56.0
CDX67573 Canola cytosol 49.85 52.96
Zm00001d004855_P002 Maize cytoskeleton, cytosol, nucleus 91.64 50.17
CDY33033 Canola nucleus 78.02 46.58
CDX80274 Canola nucleus 76.78 45.17
CDY00172 Canola cytosol 43.65 36.25
CDY20066 Canola cytosol 43.65 36.25
CDY13674 Canola cytosol 43.96 35.95
CDY52404 Canola cytosol 43.96 35.95
CDY62715 Canola cytosol 39.01 34.71
CDX67843 Canola cytosol 38.39 34.44
CDY56730 Canola cytosol 38.39 34.44
CDX71774 Canola cytosol 37.77 34.17
Zm00001d034421_P004 Maize plastid 49.23 33.97
CDX96721 Canola cytosol 43.03 31.74
CDY19213 Canola cytosol 43.34 31.67
CDY26159 Canola cytosol 43.34 31.67
CDX83847 Canola cytosol 43.03 31.66
CDY52344 Canola cytosol 38.7 31.02
CDY21087 Canola cytosol 38.7 29.27
CDX98005 Canola cytosol 38.39 29.04
CDY19392 Canola cytosol 38.08 28.81
CDY34585 Canola cytosol 38.08 28.81
CDY42404 Canola cytosol 30.96 23.42
Protein Annotations
EnsemblPlants:CDX99315EnsemblPlantsGene:GSBRNA2T00107591001Gene3D:2.30.36.70Gene3D:3.30.420.40GO:A0A078EB39InterPro:Actin
InterPro:Actin/actin-like_CSInterPro:Actin_CSPANTHER:PTHR11937PANTHER:PTHR11937:SF364PFAM:PF00022PRINTS:PR00190
ProteinID:CDX99315ProteinID:CDX99315.1ScanProsite:PS00406ScanProsite:PS00432ScanProsite:PS01132SMART:SM00268
SUPFAM:SSF53067UniParc:UPI0004EEDC78MapMan:35.1:::
Description
BnaC05g34300D
Coordinates
chrLK031909:-:1066472..1068890
Molecular Weight (calculated)
35581.6 Da
IEP (calculated)
5.583
GRAVY (calculated)
-0.199
Length
323 amino acids
Sequence
(BLAST)
001: MAEADDIQPI VCDNGTGMVK AGFAGDDAPR AVFPSVVGRP RHHGVMVGMN QKDAYVGDEA QSKRGILTLK YPIEHGVVSN WDDMEKIWHH TFYNELRIAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN SPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG LHQEMETSKT SSSIEKNYEL PDGQVITIGA
201: ERFRCPEVLF QPSFVGMEAA GIHETTYNSI MKCDVDIRKD LYGNIVLSGG TTMFSGIADR MSKEITALAP SSMKIKVVAP PERKYSVWIG GSILASLSTF
301: QQMWISKAEY DEAGPGIVHR KCF
Best Arabidopsis Sequence Match ( AT2G37620.2 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.