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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P09160_001
GSMUA_Achr2P08030_001
GSMUA_Achr2P16160_001
GSMUA_Achr3P02960_001
GSMUA_Achr3P20980_001
GSMUA_Achr3P26270_001
GSMUA_Achr5P29190_001
GSMUA_Achr6P25350_001
GSMUA_Achr6P34320_001
GSMUA_Achr7P10410_001
GSMUA_Achr7P18630_001
GSMUA_Achr7P24000_001
GSMUA_Achr8P02660_001
GSMUA_Achr8P05700_001
GSMUA_Achr8P16150_001
GSMUA_Achr9P03170_001
GSMUA_Achr9P08850_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G49240.1 GSMUA_Achr3P26270_001 AT1G72770.1 19033529
AT1G49240.1 GSMUA_Achr7P24000_001 AT1G72770.1 19033529
AT1G49240.1 GSMUA_Achr8P05700_001 AT1G72770.1 19033529
AT5G09810.1 GSMUA_Achr1P09160_001 AT2G31200.1 21798944
AT5G09810.1 GSMUA_Achr10P... AT2G37620.1 21798944
AT5G09810.1 GSMUA_Achr7P18630_001 AT2G37620.1 21798944
AT5G09810.1 GSMUA_AchrUn_... AT2G37620.1 21798944
AT5G09810.1 GSMUA_Achr10P... AT3G12110.1 21798944
AT5G09810.1 GSMUA_Achr7P18630_001 AT3G12110.1 21798944
AT5G09810.1 GSMUA_AchrUn_... AT3G12110.1 21798944
AT5G09810.1 GSMUA_Achr10P... AT3G18060.1 21798944
AT5G09810.1 GSMUA_Achr3P20980_001 AT3G18060.1 21798944
AT5G09810.1 GSMUA_Achr10P... AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr10P... AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr11P... AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr11P... AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr2P08030_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr2P16160_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr3P02960_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr5P29190_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr6P25350_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr6P34320_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr7P10410_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr8P02660_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr8P16150_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr9P03170_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr9P08850_001 AT5G09810.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P02480_001 Banana cytosol 73.45 68.01
GSMUA_Achr10P... Banana cytosol 80.0 66.87
GSMUA_Achr1P20200_001 Banana cytosol 84.36 66.86
GSMUA_Achr10P... Banana cytosol 62.91 65.78
GSMUA_Achr2P16160_001 Banana cytosol 88.73 64.72
GSMUA_Achr7P10410_001 Banana cytosol 88.36 64.46
GSMUA_Achr9P03170_001 Banana cytosol 88.0 64.36
PGSC0003DMT400076499 Potato cytosol 45.09 64.25
GSMUA_Achr8P02660_001 Banana cytosol 88.0 64.19
GSMUA_Achr10P... Banana cytosol 88.0 64.19
GSMUA_Achr5P29190_001 Banana cytosol 81.09 64.08
GSMUA_Achr7P18630_001 Banana cytosol 74.55 64.06
GSMUA_Achr8P16150_001 Banana cytosol 87.64 63.93
CDX99315 Canola cytosol 74.91 63.78
GSMUA_Achr3P02960_001 Banana cytosol 87.27 63.66
GSMUA_Achr1P05990_001 Banana plasma membrane 87.27 63.66
VIT_12s0178g00200.t01 Wine grape cytosol 87.27 63.66
GSMUA_Achr9P08850_001 Banana cytosol 80.73 63.61
GSMUA_Achr11P... Banana cytosol 80.73 63.61
Bra022356.1-P Field mustard cytosol 74.55 63.47
GSMUA_AchrUn_... Banana plasma membrane 86.91 63.4
GSMUA_Achr6P25350_001 Banana cytosol 86.91 63.4
GSMUA_Achr11P... Banana cytosol 86.91 63.4
Solyc01g104770.2.1 Tomato nucleus 86.55 63.13
CDY21607 Canola cytosol 86.55 63.13
CDX69885 Canola cytosol 86.55 63.13
AT5G09810.1 Thale cress cytosol 86.55 63.13
KRH59535 Soybean cytosol 86.18 62.86
HORVU5Hr1G117900.1 Barley cytosol 86.18 62.86
KRH43389 Soybean cytosol 86.18 62.86
PGSC0003DMT400010174 Potato cytosol 86.18 62.86
Bra028615.1-P Field mustard cytosol 86.18 62.86
TraesCS5D01G516200.1 Wheat cytosol 86.18 62.86
CDX81140 Canola cytosol 86.18 62.86
TraesCS5B01G516100.1 Wheat cytosol 86.18 62.86
Solyc11g005330.1.1 Tomato nucleus 86.18 62.86
Solyc03g078400.2.1 Tomato nucleus, plastid 86.18 62.86
PGSC0003DMT400047481 Potato cytosol 86.18 62.86
Os03t0836000-01 Rice plasma membrane, plastid 86.18 62.86
CDY56544 Canola cytosol 86.18 62.86
KRH64098 Soybean cytosol 86.18 62.86
EER90564 Sorghum cytosol 86.18 62.86
Bra006033.1-P Field mustard cytosol 85.82 62.6
TraesCS4A01G356100.2 Wheat cytosol 86.18 62.53
KRH10484 Soybean endoplasmic reticulum, mitochondrion, nucleus 85.45 62.33
KRH43946 Soybean endoplasmic reticulum, mitochondrion, nucleus 85.45 62.33
Zm00001d012277_P001 Maize cytosol 85.09 62.23
GSMUA_Achr2P15150_001 Banana cytosol 78.91 62.18
GSMUA_Achr4P31250_001 Banana cytosol 85.09 62.07
EES01810 Sorghum cytosol 84.73 61.97
Zm00001d042731_P002 Maize extracellular, plasma membrane, plastid 84.36 61.7
Solyc04g071260.2.1 Tomato plastid 84.0 61.27
CDY30296 Canola cytosol 78.55 61.19
CDY31972 Canola cytosol 78.55 61.19
CDY40061 Canola cytosol 78.55 61.19
CDX85794 Canola cytosol 78.55 61.19
Bra009081.1-P Field mustard cytosol 78.18 60.91
GSMUA_Achr3P20240_001 Banana cytosol 66.18 60.67
GSMUA_Achr6P34320_001 Banana cytosol 53.82 60.66
AT1G49240.1 Thale cress cytosol 82.91 60.48
HORVU1Hr1G074350.1 Barley cytosol 82.55 60.37
TraesCS1B01G283900.1 Wheat cytosol 82.55 60.37
TraesCS1A01G274400.1 Wheat golgi 82.55 60.37
TraesCS1D01G274400.1 Wheat cytosol 82.55 60.37
EES19603 Sorghum cytosol 82.55 60.37
Os05t0438800-01 Rice plasma membrane, plastid 82.55 60.37
CDX92272 Canola cytosol 82.55 60.21
CDX95498 Canola cytosol 82.55 60.21
CDX82326 Canola cytosol 82.55 60.21
AT3G18780.3 Thale cress cytosol 82.55 60.21
CDY18545 Canola cytosol 82.55 60.21
Zm00001d034761_P002 Maize cytosol 85.82 60.2
Zm00001d010159_P002 Maize extracellular, plasma membrane 82.18 60.11
CDY61982 Canola cytosol 82.18 59.95
KRH53856 Soybean endoplasmic reticulum, mitochondrion 72.0 59.64
GSMUA_Achr2P08030_001 Banana cytosol 75.27 59.14
Zm00001d016508_P001 Maize cytosol 29.45 58.7
PGSC0003DMT400076501 Potato cytosol 42.18 58.0
PGSC0003DMT400087294 Potato mitochondrion 57.09 57.3
Zm00001d019396_P001 Maize cytosol 34.91 57.14
CDX92271 Canola cytosol 65.09 56.47
Bra037560.1-P Field mustard cytoskeleton, cytosol 70.55 54.96
Zm00001d008746_P001 Maize cytosol 54.91 54.91
VIT_04s0044g00580.t01 Wine grape extracellular 86.18 51.52
PGSC0003DMT400088088 Potato cytosol 34.18 48.45
Zm00001d007792_P001 Maize cytosol 45.82 47.73
PGSC0003DMT400022210 Potato cytosol 62.91 47.01
PGSC0003DMT400022205 Potato cytosol 60.36 45.36
PGSC0003DMT400074882 Potato cytosol 60.36 44.86
PGSC0003DMT400074887 Potato cytosol 57.09 42.43
GSMUA_AchrUn_... Banana cytosol 46.91 33.16
GSMUA_Achr2P05970_001 Banana cytosol 18.18 28.25
GSMUA_Achr8P01270_001 Banana cytosol 43.27 27.87
GSMUA_Achr9P07630_001 Banana cytosol 43.27 27.8
GSMUA_Achr6P21120_001 Banana cytosol 42.18 27.17
GSMUA_AchrUn_... Banana endoplasmic reticulum 28.0 26.46
GSMUA_Achr8P16860_001 Banana endoplasmic reticulum 45.45 26.43
GSMUA_Achr2P05960_001 Banana cytosol 25.82 23.2
GSMUA_AchrUn_... Banana cytosol 35.27 22.3
Protein Annotations
Gene3D:3.30.420.40Gene3D:3.90.640.10MapMan:35.1InterPro:ActinInterPro:Actin/actin-like_CSInterPro:Actin_CS
GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005524EnsemblPlantsGene:GSMUA_Achr10G26750_001EnsemblPlants:GSMUA_Achr10P26750_001
EnsemblPlants:GSMUA_Achr10T26750_001UniProt:M0RLP9PFAM:PF00022PRINTS:PR00190ScanProsite:PS00406ScanProsite:PS01132
PANTHER:PTHR11937PANTHER:PTHR11937:SF252SMART:SM00268SUPFAM:SSF53067UniParc:UPI000295DBDESEG:seg
Description
Actin-2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G26750_001]
Coordinates
chr10:-:30157914..30159455
Molecular Weight (calculated)
30012.4 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.063
Length
275 amino acids
Sequence
(BLAST)
001: MADAEGIQSL VCDNGTGMVK AGFAGDDAPM AVFPSIVGRP CRTGAPVGMG QKDAYVGDEA QSKRGILALN YPIEHGVHRI LLTEAPLNPK ANREKMAQIM
101: FERFNVPAMY VAVQAVLALY ASGRTTGIVI DSGDGVSHTI LAERGYSFTT TAEWEIARDI KEKLAYLPDG QVITIGAERF RCPECDVDIR KDLYRNIVLN
201: GGSTMFPGIA VRMRKEIEAL APSNMKIKVV APPERNYSVW MGGSILASLC TFQQMSITKE EYEECGPAIV HRKCF
Best Arabidopsis Sequence Match ( AT2G37620.1 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.