Factsheet for GSMUA_Achr2P15150_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	73.93	98.1
GSMUA_Achr3P20240_001	Banana	cytosol	83.38	97.0
GSMUA_Achr6P02480_001	Banana	cytosol	82.23	96.63
GSMUA_Achr9P08850_001	Banana	cytosol	95.42	95.42
GSMUA_Achr5P29190_001	Banana	cytosol	94.84	95.11
GSMUA_Achr11P...	Banana	cytosol	94.84	94.84
GSMUA_Achr7P18630_001	Banana	cytosol	85.39	93.12
GSMUA_Achr4P31250_001	Banana	cytosol	99.14	91.78
GSMUA_AchrUn_...	Banana	plasma membrane	97.42	90.19
GSMUA_Achr10P...	Banana	cytosol	84.81	89.97
TraesCS5D01G000400.1	Wheat	cytosol	96.56	89.39
TraesCS5A01G000400.1	Wheat	golgi	96.56	89.39
GSMUA_Achr3P02960_001	Banana	cytosol	95.42	88.33
GSMUA_Achr8P16150_001	Banana	cytosol	95.42	88.33
GSMUA_Achr8P02660_001	Banana	cytosol	95.42	88.33
GSMUA_Achr2P16160_001	Banana	cytosol	95.13	88.06
GSMUA_Achr10P...	Banana	cytosol	95.13	88.06
GSMUA_Achr9P03170_001	Banana	cytosol	94.84	88.03
GSMUA_Achr6P25350_001	Banana	cytosol	94.84	87.8
GSMUA_Achr7P10410_001	Banana	cytosol	94.56	87.53
GSMUA_Achr11P...	Banana	cytosol	93.98	87.0
GSMUA_Achr1P05990_001	Banana	plasma membrane	93.7	86.74
Os12t0163700-01	Rice	plastid	89.68	86.23
GSMUA_Achr1P20200_001	Banana	cytosol	84.53	85.01
TraesCS3A01G377300.1	Wheat	cytosol	91.12	84.57
GSMUA_Achr6P34320_001	Banana	cytosol	58.17	83.2
HORVU5Hr1G000180.1	Barley	cytosol, nucleus	96.56	82.4
TraesCSU01G270700.1	Wheat	cytosol	43.27	81.18
GSMUA_Achr10P...	Banana	cytosol	62.18	78.91
HORVU3Hr1G083380.1	Barley	cytosol	87.39	78.21
TraesCS3B01G410000.1	Wheat	cytosol	87.39	75.5
GSMUA_Achr2P08030_001	Banana	cytosol	75.36	75.14
TraesCS3D01G370400.3	Wheat	plastid	87.97	75.06
GSMUA_AchrUn_...	Banana	cytosol	44.13	39.59
GSMUA_Achr2P05970_001	Banana	cytosol	17.48	34.46
GSMUA_Achr8P01270_001	Banana	cytosol	39.26	32.08
GSMUA_Achr6P21120_001	Banana	cytosol	38.68	31.62
GSMUA_Achr9P07630_001	Banana	cytosol	38.68	31.54
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	25.79	30.93
GSMUA_Achr8P16860_001	Banana	endoplasmic reticulum	40.4	29.81
GSMUA_Achr2P05960_001	Banana	cytosol	23.5	26.8
GSMUA_AchrUn_...	Banana	cytosol	31.23	25.06

Protein Annotations

Gene3D:2.30.36.70	MapMan:20.2.1	Gene3D:3.30.420.40	InterPro:Actin	InterPro:Actin/actin-like_CS	InterPro:Actin_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSMUA_Achr2G15150_001	EnsemblPlants:GSMUA_Achr2P15150_001
EnsemblPlants:GSMUA_Achr2T15150_001	UniProt:M0S856	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406	ScanProsite:PS00432
ScanProsite:PS01132	PANTHER:PTHR11937	PANTHER:PTHR11937:SF276	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI0002957DD7

Description

Actin [Source:GMGC_GENE;Acc:GSMUA_Achr2G15150_001]

Coordinates

chr2:-:16576466..16578161

Molecular Weight (calculated)

38510.3 Da

IEP (calculated)

5.633

GRAVY (calculated)

-0.193

Length

349 amino acids

Sequence
(BLAST)

001: MAEGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDN LMKILTERGY
201: SFTTTAEREI VRDMKEKLSY IALDYEKELE TAKTGSSPSM IGMEAAGIHE TTYNSIMKCD VDIRKDLYGN IVLSGGSTMF TGIADRMSKE ITALAPSSMK
301: IKVVAPPERK YSVWIGGSIL ASLSTFQQMW IAKAEYDESG PSIVHRKCF

Best Arabidopsis Sequence Match ( AT2G37620.1 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Arabidopsis Description

ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.