Factsheet for GSMUA_Achr4P31250_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P15150_001	Banana	cytosol	91.78	99.14
GSMUA_Achr10P...	Banana	cytosol	68.44	98.1
GSMUA_AchrUn_...	Banana	plasma membrane	97.61	97.61
GSMUA_Achr3P20240_001	Banana	cytosol	77.45	97.33
TraesCSU01G270700.1	Wheat	cytosol	48.01	97.31
TraesCS5D01G000400.1	Wheat	cytosol	97.08	97.08
TraesCS5A01G000400.1	Wheat	golgi	97.08	97.08
GSMUA_Achr6P02480_001	Banana	cytosol	76.39	96.97
GSMUA_Achr10P...	Banana	cytosol	84.62	96.96
GSMUA_Achr8P16150_001	Banana	cytosol	96.02	96.02
GSMUA_Achr3P02960_001	Banana	cytosol	96.02	96.02
GSMUA_Achr8P02660_001	Banana	cytosol	96.02	96.02
GSMUA_Achr10P...	Banana	cytosol	95.76	95.76
GSMUA_Achr2P16160_001	Banana	cytosol	95.76	95.76
GSMUA_Achr9P03170_001	Banana	cytosol	95.49	95.74
GSMUA_Achr9P08850_001	Banana	cytosol	88.59	95.7
GSMUA_Achr6P34320_001	Banana	cytosol	61.8	95.49
GSMUA_Achr6P25350_001	Banana	cytosol	95.49	95.49
GSMUA_Achr5P29190_001	Banana	cytosol	88.06	95.4
GSMUA_Achr7P10410_001	Banana	cytosol	95.23	95.23
GSMUA_Achr11P...	Banana	cytosol	88.06	95.13
GSMUA_Achr1P05990_001	Banana	plasma membrane	94.43	94.43
GSMUA_Achr11P...	Banana	cytosol	94.43	94.43
Os12t0163700-01	Rice	plastid	90.72	94.21
GSMUA_Achr1P20200_001	Banana	cytosol	85.94	93.37
GSMUA_Achr7P18630_001	Banana	cytosol	79.05	93.12
TraesCS3A01G377300.1	Wheat	cytosol	92.31	92.55
HORVU5Hr1G000180.1	Barley	cytosol, nucleus	97.08	89.49
HORVU3Hr1G083380.1	Barley	cytosol	88.59	85.64
GSMUA_Achr10P...	Banana	cytosol	62.07	85.09
TraesCS3B01G410000.1	Wheat	cytosol	88.86	82.92
TraesCS3D01G370400.3	Wheat	plastid	89.39	82.4
GSMUA_Achr2P08030_001	Banana	cytosol	76.13	82.0
GSMUA_AchrUn_...	Banana	cytosol	45.09	43.7
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	27.59	35.74
GSMUA_Achr2P05970_001	Banana	cytosol	16.18	34.46
GSMUA_Achr8P01270_001	Banana	cytosol	38.99	34.43
GSMUA_Achr6P21120_001	Banana	cytosol	38.2	33.72
GSMUA_Achr9P07630_001	Banana	cytosol	38.2	33.64
GSMUA_Achr8P16860_001	Banana	endoplasmic reticulum	42.18	33.62
GSMUA_Achr2P05960_001	Banana	cytosol	23.61	29.09
GSMUA_AchrUn_...	Banana	cytosol	32.89	28.51

Protein Annotations

MapMan:20.2.1	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Actin	InterPro:Actin/actin-like_CS	InterPro:Actin_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSMUA_Achr4G31250_001	EnsemblPlants:GSMUA_Achr4P31250_001
EnsemblPlants:GSMUA_Achr4T31250_001	UniProt:M0STN7	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406	ScanProsite:PS00432
ScanProsite:PS01132	PANTHER:PTHR11937	PANTHER:PTHR11937:SF276	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI000294A9FE

Description

Actin [Source:GMGC_GENE;Acc:GSMUA_Achr4G31250_001]

Coordinates

chr4:+:28494714..28496985

Molecular Weight (calculated)

41733.1 Da

IEP (calculated)

5.166

GRAVY (calculated)

-0.193

Length

377 amino acids

Sequence
(BLAST)

001: MAEGEDVQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDN LMKILTERGY
201: SFTTTAEREI VRDMKEKLSY IALDYEQELE TAKTSSSVEK SYELPDGQVI TIGAERFRCP EVLFQPSMIG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFTG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Best Arabidopsis Sequence Match ( AT2G37620.4 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Arabidopsis Description

ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.