Factsheet for TraesCS3B01G410000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G377300.1	Wheat	cytosol	88.37	94.95
TraesCS1B01G283900.1	Wheat	cytosol	82.92	89.1
GSMUA_Achr4P31250_001	Banana	cytosol	82.92	88.86
TraesCS5B01G124100.1	Wheat	cytosol	82.92	88.86
TraesCS1B01G201400.1	Wheat	cytosol	82.67	88.59
TraesCS5B01G516100.1	Wheat	cytosol	82.67	88.59
TraesCS1B01G024500.1	Wheat	golgi, nucleus	82.43	88.33
GSMUA_Achr6P02480_001	Banana	cytosol	64.6	87.88
HORVU3Hr1G083380.1	Barley	cytosol	84.65	87.69
GSMUA_Achr2P15150_001	Banana	cytosol	75.5	87.39
Os12t0163700-01	Rice	plastid	78.47	87.33
GSMUA_Achr3P20240_001	Banana	cytosol	64.6	87.0
GSMUA_Achr10P...	Banana	cytosol	70.54	86.63
TraesCS3D01G370400.3	Wheat	plastid	85.4	84.35
TraesCS4B01G050600.1	Wheat	cytosol	80.69	83.16
TraesCS3B01G401300.2	Wheat	cytosol	38.12	37.02
TraesCS5B01G358500.1	Wheat	cytosol	36.39	33.18
TraesCS6B01G189000.1	Wheat	cytosol	35.89	32.73
TraesCS6B01G240500.1	Wheat	cytosol	32.92	31.15
TraesCS5B01G422700.1	Wheat	cytosol	27.72	30.94
TraesCS7B01G211500.1	Wheat	cytosol	32.92	30.5
TraesCS1B01G333100.1	Wheat	cytosol	28.96	27.21
TraesCS2B01G597500.1	Wheat	cytosol	28.71	26.98

Protein Annotations

EnsemblPlants:TraesCS3B01G410000.1	EnsemblPlantsGene:TraesCS3B01G410000	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Actin	InterPro:Actin/actin-like_CS
InterPro:Actin_CS	PANTHER:PTHR11937	PANTHER:PTHR11937:SF205	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406
ScanProsite:PS01132	SMART:SM00268	SUPFAM:SSF53067	TIGR:cd00012	MapMan:20.2.1	:

Description

No Description!

Coordinates

chr3B:+:647078186..647079515

Molecular Weight (calculated)

44807.2 Da

IEP (calculated)

6.579

GRAVY (calculated)

-0.127

Length

404 amino acids

Sequence
(BLAST)

001: MAEEDVQPIV CDNGTGMVKA GFAGDDAPRA VFPSIVGRPR HTGVMVGMGQ KDAYVGDEAQ SKRGILTLKY PIEHGVVGNW DDMEKIWHHT FYNELRVAPE
101: EHPVLLTEAP MNPKANREKM TQIMFETFNC PAMYVAIQAV LSLYASGRTT GIVMDSGDGV SHTVPIYEGF TLPHAIIRLD LAGRDLTDGL MKIMTERGYS
201: FTTTAEREIV RDIKEKLAYV ALDYEQELET ARTSSSVEKN YELPDGQVIT IGAERFRCPE VLFQPSMIGM EAAGIHEATY NSIMKCDVDI RKDLYGNVVL
301: SGGSTMFPGI ADRMNKEITA LAPSSMRVKV VAPPERKYSV WIGGSILASL STFQQVAIFF LHTCSLMLCY CSFHSPRLMA CLHLCYRCGS PRRSTMKPAR
401: RSST

Best Arabidopsis Sequence Match ( AT2G37620.1 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Arabidopsis Description

ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.