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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, mitochondrion
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G020500.2
TraesCS1A01G183100.2
TraesCS1A01G274400.1
TraesCS1A01G358600.1
TraesCS1A01G441200.1
TraesCS1B01G024500.1
TraesCS1B01G197600.1
TraesCS1B01G283900.1
TraesCS1B01G375100.1
TraesCS1B01G475700.1
TraesCS1D01G020000.1
TraesCS1D01G186600.1
TraesCS1D01G274400.1
TraesCS1D01G363500.1
TraesCS1D01G449700.1
TraesCS3A01G047800.1
TraesCS3A01G209200.1
TraesCS3A01G249000.1
TraesCS3B01G034400.1
TraesCS3B01G240000.1
TraesCS3B01G277900.1
TraesCS3D01G031900.1
TraesCS3D01G212100.1
TraesCS3D01G249000.1
TraesCS4A01G356100.2
TraesCS5A01G124300.2
TraesCS5A01G416100.1
TraesCS5B01G124100.1
TraesCS5B01G516100.1
TraesCS5D01G132200.1
TraesCS5D01G423800.1
TraesCS5D01G516200.1
TraesCS7A01G047900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G49240.1 TraesCS1A01G358600.1 AT1G72770.1 19033529
AT1G49240.1 TraesCS1A01G441200.1 AT1G72770.1 19033529
AT1G49240.1 TraesCS1B01G375100.1 AT1G72770.1 19033529
AT1G49240.1 TraesCS1B01G475700.1 AT1G72770.1 19033529
AT1G49240.1 TraesCS1D01G363500.1 AT1G72770.1 19033529
AT1G49240.1 TraesCS1D01G449700.1 AT1G72770.1 19033529
AT1G49240.1 TraesCS3A01G209200.1 AT1G72770.1 19033529
AT1G49240.1 TraesCS3A01G249000.1 AT1G72770.1 19033529
AT1G49240.1 TraesCS3B01G240000.1 AT1G72770.1 19033529
AT1G49240.1 TraesCS3B01G277900.1 AT1G72770.1 19033529
AT1G49240.1 TraesCS3D01G212100.1 AT1G72770.1 19033529
AT1G49240.1 TraesCS3D01G249000.1 AT1G72770.1 19033529
AT1G49240.1 TraesCS7A01G047900.1 AT1G72770.1 19033529
AT5G09810.1 TraesCS1A01G183100.2 AT2G31200.1 21798944
AT5G09810.1 TraesCS1B01G197600.1 AT2G31200.1 21798944
AT5G09810.1 TraesCS1D01G186600.1 AT2G31200.1 21798944
AT5G09810.1 TraesCS5A01G416100.1 AT2G31200.1 21798944
AT5G09810.1 TraesCS5D01G423800.1 AT2G31200.1 21798944
AT5G09810.1 TraesCS3A01G047800.1 AT3G18060.1 21798944
AT5G09810.1 TraesCS3B01G034400.1 AT3G18060.1 21798944
AT5G09810.1 TraesCS3D01G031900.1 AT3G18060.1 21798944
AT5G09810.1 TraesCS1A01G020500.2 AT5G09810.1 21798944
AT5G09810.1 TraesCS1A01G274400.1 AT5G09810.1 21798944
AT5G09810.1 TraesCS1B01G024500.1 AT5G09810.1 21798944
AT5G09810.1 TraesCS1B01G283900.1 AT5G09810.1 21798944
AT5G09810.1 TraesCS1D01G020000.1 AT5G09810.1 21798944
AT5G09810.1 TraesCS1D01G274400.1 AT5G09810.1 21798944
AT5G09810.1 TraesCS4A01G356100.2 AT5G09810.1 21798944
AT5G09810.1 TraesCS5A01G124300.2 AT5G09810.1 21798944
AT5G09810.1 TraesCS5B01G124100.1 AT5G09810.1 21798944
AT5G09810.1 TraesCS5B01G516100.1 AT5G09810.1 21798944
AT5G09810.1 TraesCS5D01G132200.1 AT5G09810.1 21798944
AT5G09810.1 TraesCS5D01G516200.1 AT5G09810.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os11t0163100-01 Rice nucleus, plasma membrane, plastid 99.2 99.2
Zm00001d053177_P004 Maize cytosol 98.67 98.67
VIT_12s0178g00200.t01 Wine grape cytosol 98.41 98.41
KXG23031 Sorghum cytosol 98.41 98.41
TraesCS5B01G516100.1 Wheat cytosol 98.14 98.14
CDX69885 Canola cytosol 97.88 97.88
CDY21607 Canola cytosol 97.88 97.88
KRH43389 Soybean cytosol 97.88 97.88
AT5G09810.1 Thale cress cytosol 97.88 97.88
KRH59535 Soybean cytosol 97.88 97.88
CDY40061 Canola cytosol 91.51 97.73
CDY31972 Canola cytosol 91.51 97.73
CDX85794 Canola cytosol 91.51 97.73
CDY30296 Canola cytosol 91.51 97.73
TraesCS1B01G201400.1 Wheat cytosol 97.61 97.61
Solyc03g078400.2.1 Tomato nucleus, plastid 97.61 97.61
KRH64098 Soybean cytosol 97.61 97.61
TraesCS1B01G024500.1 Wheat golgi, nucleus 97.61 97.61
Bra028615.1-P Field mustard cytosol 97.61 97.61
PGSC0003DMT400047481 Potato cytosol 97.61 97.61
KRH53856 Soybean endoplasmic reticulum, mitochondrion 85.94 97.59
Bra009081.1-P Field mustard cytosol 91.25 97.45
PGSC0003DMT400010174 Potato cytosol 97.35 97.35
Solyc11g005330.1.1 Tomato nucleus 97.35 97.35
CDX81140 Canola cytosol 97.35 97.35
CDY56544 Canola cytosol 97.35 97.35
Bra006033.1-P Field mustard cytosol 97.08 97.08
Solyc01g104770.2.1 Tomato nucleus 96.55 96.55
TraesCS5D01G132200.1 Wheat golgi 94.43 95.96
PGSC0003DMT400076499 Potato cytosol 49.07 95.85
KRH43946 Soybean endoplasmic reticulum, mitochondrion, nucleus 94.96 94.96
KRH10484 Soybean endoplasmic reticulum, mitochondrion, nucleus 94.96 94.96
TraesCS1B01G283900.1 Wheat cytosol 93.1 93.35
Solyc04g071260.2.1 Tomato plastid 92.31 92.31
TraesCS5A01G124300.2 Wheat golgi 100.0 92.18
CDX82326 Canola cytosol 91.78 91.78
AT1G49240.1 Thale cress cytosol 91.78 91.78
CDX99315 Canola cytosol 78.51 91.64
Bra022356.1-P Field mustard cytosol 78.51 91.64
AT3G18780.3 Thale cress cytosol 91.51 91.51
CDX92272 Canola cytosol 91.51 91.51
CDX95498 Canola cytosol 91.51 91.51
CDY18545 Canola cytosol 91.51 91.51
CDY61982 Canola cytosol 91.51 91.51
CDX92271 Canola cytosol 76.39 90.85
PGSC0003DMT400076501 Potato cytosol 46.68 88.0
TraesCS4B01G050600.1 Wheat cytosol 90.98 87.5
Bra037560.1-P Field mustard cytoskeleton, cytosol 78.25 83.57
TraesCS3B01G410000.1 Wheat cytosol 88.86 82.92
VIT_04s0044g00580.t01 Wine grape extracellular 97.88 80.22
PGSC0003DMT400087294 Potato mitochondrion 56.76 78.1
HORVU5Hr1G039850.3 Barley mitochondrion 95.76 77.63
PGSC0003DMT400022210 Potato cytosol 68.97 70.65
PGSC0003DMT400022205 Potato cytosol 67.37 69.4
PGSC0003DMT400074882 Potato cytosol 67.64 68.92
PGSC0003DMT400074887 Potato cytosol 64.72 65.95
PGSC0003DMT400088088 Potato cytosol 32.89 63.92
Zm00001d004855_P002 Maize cytoskeleton, cytosol, nucleus 97.35 62.2
TraesCS3B01G401300.2 Wheat cytosol 44.83 40.62
TraesCS5B01G358500.1 Wheat cytosol 42.44 36.12
TraesCS6B01G189000.1 Wheat cytosol 41.91 35.67
TraesCS5B01G422700.1 Wheat cytosol 33.42 34.81
TraesCS6B01G240500.1 Wheat cytosol 38.2 33.72
TraesCS7B01G211500.1 Wheat cytosol 37.93 32.8
TraesCS2B01G597500.1 Wheat cytosol 32.89 28.84
TraesCS1B01G333100.1 Wheat cytosol 32.89 28.84
Protein Annotations
EnsemblPlants:TraesCS5B01G124100.1EnsemblPlantsGene:TraesCS5B01G124100Gene3D:3.30.420.40Gene3D:3.90.640.10InterPro:ActinInterPro:Actin/actin-like_CS
InterPro:Actin_CSPANTHER:PTHR11937PANTHER:PTHR11937:SF252PFAM:PF00022PRINTS:PR00190ScanProsite:PS00406
ScanProsite:PS00432ScanProsite:PS01132SMART:SM00268SUPFAM:SSF53067TIGR:cd00012MapMan:20.2.1
Description
No Description!
Coordinates
chr5B:-:223983433..223985799
Molecular Weight (calculated)
41658.0 Da
IEP (calculated)
5.162
GRAVY (calculated)
-0.164
Length
377 amino acids
Sequence
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDC LMKILTERGY
201: SFTTTAEREI VRDIKEKLAY VALDYEQELE NAKSSSSVEK SYELPDGQVI TIGAERFRCP EVLFQPSFIG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KGEYDESGPA IVHRKCF
Best Arabidopsis Sequence Match ( AT2G37620.2 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.