Factsheet for AT1G49240.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G18780.3	Thale cress	cytosol	99.73	99.73
CDY61982	Canola	cytosol	99.47	99.47
Bra022356.1-P	Field mustard	cytosol	84.62	98.76
CDX92271	Canola	cytosol	83.02	98.74
KRH53856	Soybean	endoplasmic reticulum, mitochondrion	81.17	92.17
EES08028	Sorghum	cytosol	92.04	92.04
GSMUA_Achr7P10410_001	Banana	cytosol	92.04	92.04
Solyc11g005330.1.1	Tomato	nucleus	92.04	92.04
Solyc03g078400.2.1	Tomato	nucleus, plastid	92.04	92.04
PGSC0003DMT400047481	Potato	cytosol	92.04	92.04
PGSC0003DMT400010174	Potato	cytosol	92.04	92.04
KRH64098	Soybean	cytosol	92.04	92.04
AT5G09810.1	Thale cress	cytosol	92.04	92.04
GSMUA_Achr9P03170_001	Banana	cytosol	91.78	92.02
KRH59535	Soybean	cytosol	91.78	91.78
GSMUA_Achr6P25350_001	Banana	cytosol	91.78	91.78
HORVU5Hr1G117900.1	Barley	cytosol	91.78	91.78
KRH43389	Soybean	cytosol	91.78	91.78
Zm00001d053177_P004	Maize	cytosol	91.78	91.78
Os05t0106600-01	Rice	nucleus	91.78	91.78
TraesCS5B01G124100.1	Wheat	cytosol	91.78	91.78
TraesCS5B01G516100.1	Wheat	cytosol	91.78	91.78
TraesCS5D01G516200.1	Wheat	cytosol	91.78	91.78
AT3G12110.1	Thale cress	cytosol	91.78	91.78
GSMUA_Achr9P08850_001	Banana	cytosol	84.88	91.69
KXG23031	Sorghum	cytosol	91.51	91.51
GSMUA_Achr2P16160_001	Banana	cytosol	91.51	91.51
Os11t0163100-01	Rice	nucleus, plasma membrane, plastid	91.51	91.51
GSMUA_Achr5P29190_001	Banana	cytosol	84.35	91.38
Zm00001d019635_P001	Maize	cytosol	33.42	91.3
TraesCS4A01G356100.2	Wheat	cytosol	91.78	91.29
TraesCS1D01G020000.1	Wheat	cytosol	91.25	91.25
TraesCS1B01G024500.1	Wheat	golgi, nucleus	91.25	91.25
GSMUA_Achr10P...	Banana	cytosol	91.25	91.25
Os01t0964133-01	Rice	plasma membrane	91.25	91.25
GSMUA_Achr8P02660_001	Banana	cytosol	91.25	91.25
EER90564	Sorghum	cytosol	91.25	91.25
GSMUA_Achr6P34320_001	Banana	cytosol	58.89	90.98
AT3G53750.2	Thale cress	cytosol	90.98	90.98
AT3G46520.2	Thale cress	cytosol	90.98	90.98
KXG21029	Sorghum	cytosol	90.98	90.98
Zm00001d035720_P002	Maize	cytosol	90.98	90.98
AT2G37620.1	Thale cress	cytosol	90.98	90.98
Zm00001d011086_P005	Maize	cytosol	90.98	90.98
GSMUA_Achr3P02960_001	Banana	cytosol	90.98	90.98
GSMUA_Achr8P16150_001	Banana	cytosol	90.98	90.98
GSMUA_Achr11P...	Banana	cytosol	84.08	90.83
AT5G59370.2	Thale cress	cytosol	90.72	90.72
Os03t0836000-01	Rice	plasma membrane, plastid	90.72	90.72
GSMUA_Achr11P...	Banana	cytosol	90.45	90.45
Zm00001d012277_P001	Maize	cytosol	89.92	90.16
Bra037560.1-P	Field mustard	cytoskeleton, cytosol	84.35	90.08
EES01810	Sorghum	cytosol	89.39	89.63
TraesCS5D01G132200.1	Wheat	golgi	87.8	89.22
HORVU1Hr1G074350.1	Barley	cytosol	88.86	89.1
TraesCS1D01G274400.1	Wheat	cytosol	88.86	89.1
Os05t0438800-01	Rice	plasma membrane, plastid	88.86	89.1
TraesCS1B01G283900.1	Wheat	cytosol	88.86	89.1
TraesCS1A01G274400.1	Wheat	golgi	88.86	89.1
Zm00001d035722_P007	Maize	plasma membrane	90.98	89.09
Zm00001d042731_P002	Maize	extracellular, plasma membrane, plastid	88.59	88.83
EES19603	Sorghum	cytosol	88.33	88.56
Zm00001d010159_P002	Maize	extracellular, plasma membrane	87.53	87.77
Zm00001d034761_P002	Maize	cytosol	91.25	87.76
Zm00001d016605_P001	Maize	cytosol	36.6	87.34
TraesCS5A01G124300.2	Wheat	golgi	91.78	84.6
TraesCS1A01G020500.2	Wheat	cytosol	91.25	84.52
HORVU1Hr1G002840.6	Barley	plasma membrane	91.25	84.52
GSMUA_Achr10P...	Banana	cytosol	60.48	82.91
AT2G42100.1	Thale cress	cytosol	83.02	82.8
Zm00001d016508_P001	Maize	cytosol	29.97	81.88
Zm00001d008746_P001	Maize	cytosol	59.42	81.45
GSMUA_Achr2P08030_001	Banana	cytosol	74.01	79.71
KXG21030	Sorghum	cytosol	82.23	79.69
Zm00001d019396_P001	Maize	cytosol	35.01	78.57
AT2G42170.3	Thale cress	cytosol	68.17	78.12
Zm00001d007792_P001	Maize	cytosol	53.05	75.76
Zm00001d011087_P001	Maize	plastid	90.98	75.55
VIT_04s0044g00580.t01	Wine grape	extracellular	92.04	75.43
Zm00001d003298_P001	Maize	cytosol	50.4	72.24
HORVU5Hr1G039850.3	Barley	mitochondrion	88.33	71.61
AT2G42090.1	Thale cress	cytosol	68.97	71.04
Zm00001d004087_P001	Maize	cytosol	40.05	69.91
Os01t0866100-01	Rice	plasma membrane	36.6	67.98
Zm00001d004855_P002	Maize	cytoskeleton, cytosol, nucleus	90.98	58.14
AT3G27000.1	Thale cress	cytosol	44.3	42.93
AT1G18450.1	Thale cress	cytosol	43.5	37.19
AT3G60830.1	Thale cress	cytosol	35.54	36.91
Zm00001d034421_P004	Maize	plastid	44.3	35.68
AT1G13180.1	Thale cress	cytosol	36.87	32.55
AT3G33520.1	Thale cress	cytosol	32.89	29.45

Protein Annotations

MapMan:20.2.1	Gene3D:3.30.420.40	Gene3D:3.90.640.10	EntrezGene:841347	UniProt:A0A178WDV5	ProteinID:AAC49523.1
ProteinID:AAF69724.1	Symbol:ACT8	ProteinID:AEE32408.1	EMBL:AF370302	ArrayExpress:AT1G49240	EnsemblPlantsGene:AT1G49240
RefSeq:AT1G49240	TAIR:AT1G49240	RefSeq:AT1G49240-TAIR-G	EnsemblPlants:AT1G49240.1	TAIR:AT1G49240.1	EMBL:AY063089
EMBL:AY124004	InterPro:Actin	InterPro:Actin/actin-like_CS	InterPro:Actin_CS	Unigene:At.24689	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003729	GO:GO:0005488	GO:GO:0005507
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005829	GO:GO:0005856	GO:GO:0005886	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0009506	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009628	GO:GO:0009651
GO:GO:0009653	GO:GO:0009941	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049
GO:GO:0030154	GO:GO:0040007	GO:GO:0048768	RefSeq:NP_175350.1	ProteinID:OAP15222.1	PFAM:PF00022
PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000282
PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001170	PO:PO:0001185	PO:PO:0004006	PO:PO:0004013	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007131
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009001	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PRINTS:PR00190
ScanProsite:PS00406	ScanProsite:PS00432	ScanProsite:PS01132	PANTHER:PTHR11937	PANTHER:PTHR11937:SF276	UniProt:Q96293
SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI000012542E	EMBL:Z17778	:	:

Description

ACT8Actin-8 [Source:UniProtKB/Swiss-Prot;Acc:Q96293]

Coordinates

chr1:+:18215800..18218339

Molecular Weight (calculated)

41865.2 Da

IEP (calculated)

5.286

GRAVY (calculated)

-0.181

Length

377 amino acids

Sequence
(BLAST)

001: MADADDIQPI VCDNGTGMVK AGFAGDDAPR AVFPSVVGRP RHHGVMVGMN QKDAYVGDEA QSKRGILTLK YPIEHGVVSN WDDMEKIWHH TFYNELRIAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN SPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG FSLPHAILRL DLAGRDLTDY LMKILTERGY
201: MFTTTAEREI VRDIKEKLSF VAVDYEQEME TSKTSSSIEK NYELPDGQVI TIGAERFRCP EVLFQPSFVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFSG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KAEYDEAGPG IVHRKCF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.