Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d019635_P001 | Maize | cytosol | 51.33 | 97.83 |
| PGSC0003DMT400076499 | Potato | cytosol | 66.92 | 91.19 |
| Zm00001d016508_P001 | Maize | cytosol | 45.25 | 86.23 |
| Zm00001d016605_P001 | Maize | cytosol | 51.71 | 86.08 |
| Zm00001d019396_P001 | Maize | cytosol | 52.09 | 81.55 |
| Zm00001d004087_P001 | Maize | cytosol | 63.88 | 77.78 |
| Os01t0866100-01 | Rice | plasma membrane | 55.89 | 72.41 |
| CDX92271 | Canola | cytosol | 70.72 | 58.68 |
| Zm00001d007792_P001 | Maize | cytosol | 58.56 | 58.33 |
| PGSC0003DMT400088088 | Potato | cytosol | 41.06 | 55.67 |
| Zm00001d013410_P001 | Maize | cytosol | 77.19 | 53.85 |
| Zm00001d033790_P001 | Maize | cytosol | 77.19 | 53.85 |
| VIT_12s0178g00200.t01 | Wine grape | cytosol | 76.81 | 53.58 |
| Zm00001d013873_P001 | Maize | plasma membrane, plastid | 76.43 | 53.32 |
| Solyc01g104770.2.1 | Tomato | nucleus | 76.43 | 53.32 |
| KRH64098 | Soybean | cytosol | 76.43 | 53.32 |
| KRH59535 | Soybean | cytosol | 76.43 | 53.32 |
| KRH43389 | Soybean | cytosol | 76.43 | 53.32 |
| Zm00001d011086_P005 | Maize | cytosol | 76.43 | 53.32 |
| Zm00001d053177_P004 | Maize | cytosol | 76.43 | 53.32 |
| Zm00001d035720_P002 | Maize | cytosol | 76.43 | 53.32 |
| CDY21607 | Canola | cytosol | 76.05 | 53.05 |
| CDX69885 | Canola | cytosol | 76.05 | 53.05 |
| Zm00001d032480_P002 | Maize | plasma membrane, plastid | 76.05 | 53.05 |
| AT5G09810.1 | Thale cress | cytosol | 76.05 | 53.05 |
| KRH10484 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 75.67 | 52.79 |
| KRH43946 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 75.67 | 52.79 |
| Solyc03g078400.2.1 | Tomato | nucleus, plastid | 75.67 | 52.79 |
| PGSC0003DMT400010174 | Potato | cytosol | 75.67 | 52.79 |
| Solyc11g005330.1.1 | Tomato | nucleus | 75.67 | 52.79 |
| PGSC0003DMT400047481 | Potato | cytosol | 75.67 | 52.79 |
| Bra028615.1-P | Field mustard | cytosol | 75.67 | 52.79 |
| CDY56544 | Canola | cytosol | 75.29 | 52.52 |
| CDX81140 | Canola | cytosol | 75.29 | 52.52 |
| Bra006033.1-P | Field mustard | cytosol | 74.9 | 52.25 |
| Zm00001d035722_P007 | Maize | plasma membrane | 76.43 | 52.21 |
| Zm00001d012277_P001 | Maize | cytosol | 74.52 | 52.13 |
| CDX99315 | Canola | cytosol | 63.88 | 52.01 |
| Bra037560.1-P | Field mustard | cytoskeleton, cytosol | 69.58 | 51.84 |
| Bra022356.1-P | Field mustard | cytosol | 63.5 | 51.7 |
| Zm00001d042731_P002 | Maize | extracellular, plasma membrane, plastid | 73.38 | 51.33 |
| Solyc04g071260.2.1 | Tomato | plastid | 73.38 | 51.19 |
| Zm00001d034761_P002 | Maize | cytosol | 76.05 | 51.02 |
| Zm00001d010159_P002 | Maize | extracellular, plasma membrane | 72.62 | 50.8 |
| CDY40061 | Canola | cytosol | 67.68 | 50.42 |
| CDY31972 | Canola | cytosol | 67.68 | 50.42 |
| CDY30296 | Canola | cytosol | 67.68 | 50.42 |
| CDX85794 | Canola | cytosol | 67.68 | 50.42 |
| AT1G49240.1 | Thale cress | cytosol | 72.24 | 50.4 |
| Bra009081.1-P | Field mustard | cytosol | 67.3 | 50.14 |
| AT3G18780.3 | Thale cress | cytosol | 71.86 | 50.13 |
| CDX82326 | Canola | cytosol | 71.86 | 50.13 |
| CDY18545 | Canola | cytosol | 71.86 | 50.13 |
| CDX95498 | Canola | cytosol | 71.86 | 50.13 |
| CDX92272 | Canola | cytosol | 71.86 | 50.13 |
| CDY61982 | Canola | cytosol | 71.48 | 49.87 |
| GSMUA_Achr2P08030_001 | Banana | cytosol | 65.02 | 48.86 |
| KRH53856 | Soybean | endoplasmic reticulum, mitochondrion | 59.7 | 47.29 |
| Zm00001d011087_P001 | Maize | plastid | 76.43 | 44.27 |
| VIT_04s0044g00580.t01 | Wine grape | extracellular | 76.05 | 43.48 |
| PGSC0003DMT400087294 | Potato | mitochondrion | 44.49 | 42.7 |
| PGSC0003DMT400022205 | Potato | cytosol | 58.17 | 41.8 |
| PGSC0003DMT400022210 | Potato | cytosol | 58.17 | 41.58 |
| PGSC0003DMT400074882 | Potato | cytosol | 57.79 | 41.08 |
| PGSC0003DMT400074887 | Potato | cytosol | 53.99 | 38.38 |
| Zm00001d004855_P002 | Maize | cytoskeleton, cytosol, nucleus | 76.43 | 34.07 |
| Zm00001d034421_P004 | Maize | plastid | 53.61 | 30.13 |
| Zm00001d008746_P001 | Maize | cytosol | 31.18 | 29.82 |
| Zm00001d022558_P001 | Maize | cytosol | 41.06 | 27.76 |
| Zm00001d008652_P001 | Maize | endoplasmic reticulum, plastid | 20.91 | 23.81 |
| Zm00001d017106_P001 | Maize | cytosol | 34.6 | 21.02 |
| Zm00001d050981_P001 | Maize | cytosol | 33.84 | 19.39 |
| Zm00001d027326_P001 | Maize | cytosol, extracellular, nucleus | 30.8 | 18.28 |
| Zm00001d049629_P002 | Maize | nucleus | 24.71 | 17.66 |
| Zm00001d014112_P003 | Maize | cytosol | 26.24 | 16.71 |
| Zm00001d024059_P002 | Maize | cytosol | 26.62 | 16.28 |
| PGSC0003DMT400076501 | Potato | cytosol | 7.98 | 10.5 |
Protein Annotations
| Gene3D:2.30.36.70 | Gene3D:3.30.420.40 | MapMan:35.1 | UniProt:A0A1D6E8G3 | InterPro:Actin | InterPro:Actin/actin-like_CS |
| InterPro:Actin_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | ProteinID:ONM16709.1 |
| PFAM:PF00022 | PRINTS:PR00190 | ScanProsite:PS00406 | ScanProsite:PS01132 | PANTHER:PTHR11937 | PANTHER:PTHR11937:SF355 |
| SMART:SM00268 | SUPFAM:SSF53067 | UniParc:UPI0004DEBB77 | EnsemblPlantsGene:Zm00001d003298 | EnsemblPlants:Zm00001d003298_P001 | EnsemblPlants:Zm00001d003298_T001 |
| SEG:seg | : | : | : | : | : |
Description
Actin-7
Coordinates
chr2:-:39213977..39217124
Molecular Weight (calculated)
29137.9 Da
IEP (calculated)
5.314
GRAVY (calculated)
-0.103
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MADAEDIQPL VCDNRTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVEMG QKDAYVGDEA QSKRGIRTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANKEK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTAPIYEG YALPHAILRL DLAGRDLIDC SSALDCVCSK
201: DIIQNLTERF YSLHNYCIAF FVEYYLLGDG LLLLLAGLRT DGLQSIVGAW YQRGRQGCTC SQS
101: EEHPILLTEA PLNPKANKEK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTAPIYEG YALPHAILRL DLAGRDLIDC SSALDCVCSK
201: DIIQNLTERF YSLHNYCIAF FVEYYLLGDG LLLLLAGLRT DGLQSIVGAW YQRGRQGCTC SQS
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTSAEREI VRDVKEKLAY IALDYEQEME TANTSSSVEK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTSAEREI VRDVKEKLAY IALDYEQEME TANTSSSVEK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT11Actin-11 [Source:UniProtKB/Swiss-Prot;Acc:P53496]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.