Factsheet for Zm00001d008517_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040038_P001	Maize	cytosol, extracellular	92.48	96.72
Zm00001d014053_P001	Maize	cytosol	39.66	96.2
Os01t0125800-01	Rice	plasma membrane	87.77	91.8
KXG32003	Sorghum	cytosol	92.63	87.82
Zm00001d047714_P001	Maize	plasma membrane	40.13	86.2
TraesCS3D01G031900.1	Wheat	cytosol	82.13	85.9
TraesCS3B01G034400.1	Wheat	cytosol, golgi	82.13	85.9
HORVU3Hr1G004510.1	Barley	cytosol	82.13	85.76
TraesCS3A01G047800.1	Wheat	cytosol	81.97	85.74
Zm00001d038078_P001	Maize	cytosol	23.04	84.97
Zm00001d008768_P001	Maize	cytosol	23.04	84.97
GSMUA_Achr10P...	Banana	cytosol	71.63	75.04
GSMUA_Achr3P20980_001	Banana	cytosol	65.67	72.12
VIT_17s0000g02670.t01	Wine grape	cytosol	68.65	71.92
KRH60498	Soybean	cytosol	65.99	69.02
Zm00001d042097_P001	Maize	cytosol	7.68	69.01
Solyc03g119090.2.1	Tomato	cytosol, extracellular	65.83	68.97
KRH41795	Soybean	cytosol, endoplasmic reticulum, nucleus	65.83	68.85
PGSC0003DMT400014412	Potato	cytosol	65.67	68.8
AT3G18060.1	Thale cress	cytosol	65.05	68.14
CDY49616	Canola	cytosol	59.56	68.1
Bra022278.1-P	Field mustard	cytosol	64.11	67.16
KRG90988	Soybean	cytosol	63.95	66.89
CDX92192	Canola	cytosol	61.76	66.11
HORVU3Hr1G021490.1	Barley	cytosol	4.39	65.12
KRH35765	Soybean	golgi	43.73	63.99
AT2G01330.1	Thale cress	cytosol	60.19	62.85
CDY25939	Canola	cytosol	59.56	61.59
CDY41077	Canola	cytosol	59.4	61.43
Bra017456.1-P	Field mustard	cytosol	59.4	61.43
Zm00001d029295_P001	Maize	cytosol	9.72	38.99

Protein Annotations

EntrezGene:100382413	Gene3D:2.130.10.10	MapMan:35.1	UniProt:A0A1D6FDQ9	ProteinID:AQK90108.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19856	PANTHER:PTHR19856:SF4	SMART:SM00320
SUPFAM:SSF50978	UniParc:UPI00084351F4	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	EnsemblPlantsGene:Zm00001d008517	EnsemblPlants:Zm00001d008517_P001	EnsemblPlants:Zm00001d008517_T001	:	:

Description

Actin-interacting protein 1-2

Coordinates

chr8:+:11273752..11279847

Molecular Weight (calculated)

69814.6 Da

IEP (calculated)

6.781

GRAVY (calculated)

-0.137

Length

638 amino acids

Sequence
(BLAST)

001: MAQLVETYAC SPATERGRGI LLAGDPKTDT IAYCTGRSVI IRRLDAPLDT WVYPDHAYPT TVARFSPNGE WVASADASGC VRVWGRYGDR ALKAEFRPLS
101: GRVDDLRWSP DGLRIVVSGD GKGKSFVRAF VWDSGSTVGE FDGHSKRVLS CDFKPTRPFR IVTCGEDFLA NFYEGPPFKF KHSIRSIYTS DVDYYTTFIT
201: RCVFHIFQFT LHFRDHSNFV NCIRYAPDGS KFITVSSDKK GLIYDGKTGE KIGELSTEGG HTGSIYAVSW NPDSKQVLTV SADKSAKVWD IFEDASGKLN
301: RTLVCPGIGG VDDMLVGCLW QNDHLVTVSL GGTFNVFSAS NPDQEPVTFA GHLKTVSSLV FFPQSSPRTI LSTSYDGVIM RWILGVGFGG RLMRKNNTQI
401: KCFAAVEEEL VTSGYDNKIF RIPLNGNQCG DAESVDVGGQ PNALNLALQK PEFALVTTDS GIVLLHNSKV ISTTKVNYTI TSSSVSPDGT EAVVGAQDGK
501: LRIYSISGDT LTEEALLEKH RGAITSIHYS PDVSMFASAD ANREAVVWDR ASREIKLKNM LYHTARINSL AWSPDSRLVA TGSLDTCAIV YEIDKPVASR
601: VTIKGAHLGG VHGLTFLEND TLVTAGEDAC IRVWKVVE

Best Arabidopsis Sequence Match ( AT3G18060.1 )
(BLAST)

001: MELSETYACV PSTERGRGIL ISGNSKSDTI LYTNGRSVVT LDLNNPLKVS IYGEHAYPAT VARYSPNGEW IASGDVSGTV RIWGAYNDHV LKNEFKVLAG
101: RIDDLQWSAD GMRIVASGDG KGKSLVRAFM WDSGSNVGEF DGHSRRVLSC AIKPTRPFRI VTCGEDFLVN FYEGPPFKFK LSSREHSNFV NCVRFAPDGS
201: KFITVSSDKK GIIYDGKTCE ILGELSSDDG HKGSIYAVSW SPDGKQVLTV SADKSAKIWD ISDNGSGSLN TTLNCPGSSG GVDDMLVGCL WQNDHIVTVS
301: LGGTISIFSA SDLDKSPFQF SGHMKNVSSL AVLKGNADYI LSGSYDGLIC KWMLGRGFCG KLQRTQNSQI KCFAAHEEEI VTSGYDNKIS RISYKDDQCT
401: NEESIDIGNQ PKDLSLAPLS PDLLLVTFES GVVFLRDGKV VSTINLGFIV TALAVTPDGT EAVIGGQDGK LHLYSINGDS LTEEAVLERH RGAISVIRYS
501: PDLSMFASAD LNREAVVWDR VSREMKLKNM LYHSARINCL AWSPNSTMVA TGSLDTCVIV YEVDKPASSR MTIKGAHLGG VYGLGFADDS HVVSSGEDAC
601: IRVWSFTPQ

Arabidopsis Description

AIP1-2Actin-interacting protein 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV35]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.