Factsheet for Os01t0125800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040038_P001	Maize	cytosol, extracellular	91.64	91.64
Zm00001d014053_P001	Maize	cytosol	38.2	88.59
HORVU3Hr1G004510.1	Barley	cytosol	88.36	88.22
TraesCS3D01G031900.1	Wheat	cytosol	88.03	88.03
TraesCS3B01G034400.1	Wheat	cytosol, golgi	88.03	88.03
TraesCS3A01G047800.1	Wheat	cytosol	88.03	88.03
Zm00001d008517_P001	Maize	cytosol	91.8	87.77
KXG32003	Sorghum	cytosol	91.97	83.36
Zm00001d047714_P001	Maize	plasma membrane	39.02	80.13
Zm00001d038078_P001	Maize	cytosol	22.46	79.19
Zm00001d008768_P001	Maize	cytosol	22.46	79.19
GSMUA_Achr10P...	Banana	cytosol	75.41	75.53
VIT_17s0000g02670.t01	Wine grape	cytosol	72.13	72.25
GSMUA_Achr3P20980_001	Banana	cytosol	68.69	72.12
Solyc03g119090.2.1	Tomato	cytosol, extracellular	69.84	69.95
PGSC0003DMT400014412	Potato	cytosol	69.84	69.95
KRH60498	Soybean	cytosol	68.85	68.85
KRH41795	Soybean	cytosol, endoplasmic reticulum, nucleus	68.52	68.52
CDY49616	Canola	cytosol	61.8	67.56
AT3G18060.1	Thale cress	cytosol	67.38	67.49
KRG90988	Soybean	cytosol	67.05	67.05
Bra022278.1-P	Field mustard	cytosol	66.56	66.67
CDX92192	Canola	cytosol	64.59	66.11
HORVU3Hr1G021490.1	Barley	cytosol	4.59	65.12
KRH35765	Soybean	golgi	46.07	64.45
AT2G01330.1	Thale cress	cytosol	63.44	63.34
CDY25939	Canola	cytosol	62.79	62.07
CDY41077	Canola	cytosol	62.3	61.59
Bra017456.1-P	Field mustard	cytosol	62.3	61.59

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	EntrezGene:4326007	ProteinID:BAB21186.1	ProteinID:BAB55540.1	ProteinID:BAF03807.1
ProteinID:BAS70171.1	ProteinID:EEE53793.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987
GO:GO:0016043	GO:GO:0030042	GO:GO:0030836	GO:GO:0030864	GO:GO:0042643	GO:GO:0051015
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	EnsemblPlantsGene:Os01g0125800	EnsemblPlants:Os01t0125800-01	PFAM:PF00400
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19856	PANTHER:PTHR19856:SF4	UniProt:Q9AWU6
SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI00000A65FB	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	RefSeq:XP_015621882.1	:	:	:

Description

Actin-interacting protein 1Actin-interacting, WD40-repeat protein, Actin turnover (Os01t0125800-01)

Coordinates

chr1:+:1413839..1418982

Molecular Weight (calculated)

66286.4 Da

IEP (calculated)

6.915

GRAVY (calculated)

-0.200

Length

610 amino acids

Sequence
(BLAST)

001: MAQLQETYAC SPATERGRGI LLAGDPKTET IAYCTGRSVI IRRLDAPLDC WAYPDHAYPT TVARFSPNGE WVASADASGC VRVWGRYGDR ALKAEFRPLS
101: GRVDDLRWSP DGLRIVVSGD GKGKSFVRAF VWDSGSTVGE FDGHSKRVLS CDFKPTRPFR IVTCGEDFLA NYYEGPPFKF KHSIRDHSNF VNCIRYAPDG
201: SKFISVSSDK KGLIYDGKTG DKIGELSSEG SHTGSIYAVS WSPDSKQVLT VSADKTAKVW DILEDASGKL NRTLACPGTG GVDDMLVGCL WQNDYLVTVS
301: LGGTFNVFSA SNPDKEPVTF AGHLKTVSSL AFFPQSNPKT ILSTSYDGVI MRWIKGVGYG GRLMRKNNTQ IKCFTVAEEE LVTSGYDNKV FRIPLNGDQC
401: GDAESVDVGG QPNALNLAIQ KPEFALVTTD SGIVLLHKST VISTTKVNYT ITSSAVSPDG TEAIVGAQDG KLRIYSINGD TVTEEALIEK HRGAITCIHY
501: SPDVSMFASA DANREAVVWD RATREIKLKN MLFHSARINC LAWSPDNRLV ATGSLDTCAI VYEIDKPASS RITVKGAHLG GVHGLTFVDN DSLVTAGEDA
601: CIRVWKLVPQ

Best Arabidopsis Sequence Match ( AT3G18060.1 )
(BLAST)

001: MELSETYACV PSTERGRGIL ISGNSKSDTI LYTNGRSVVT LDLNNPLKVS IYGEHAYPAT VARYSPNGEW IASGDVSGTV RIWGAYNDHV LKNEFKVLAG
101: RIDDLQWSAD GMRIVASGDG KGKSLVRAFM WDSGSNVGEF DGHSRRVLSC AIKPTRPFRI VTCGEDFLVN FYEGPPFKFK LSSREHSNFV NCVRFAPDGS
201: KFITVSSDKK GIIYDGKTCE ILGELSSDDG HKGSIYAVSW SPDGKQVLTV SADKSAKIWD ISDNGSGSLN TTLNCPGSSG GVDDMLVGCL WQNDHIVTVS
301: LGGTISIFSA SDLDKSPFQF SGHMKNVSSL AVLKGNADYI LSGSYDGLIC KWMLGRGFCG KLQRTQNSQI KCFAAHEEEI VTSGYDNKIS RISYKDDQCT
401: NEESIDIGNQ PKDLSLAPLS PDLLLVTFES GVVFLRDGKV VSTINLGFIV TALAVTPDGT EAVIGGQDGK LHLYSINGDS LTEEAVLERH RGAISVIRYS
501: PDLSMFASAD LNREAVVWDR VSREMKLKNM LYHSARINCL AWSPNSTMVA TGSLDTCVIV YEVDKPASSR MTIKGAHLGG VYGLGFADDS HVVSSGEDAC
601: IRVWSFTPQ

Arabidopsis Description

AIP1-2Actin-interacting protein 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV35]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.