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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY25939 Canola cytosol 91.33 90.44
Bra017456.1-P Field mustard cytosol 90.83 89.95
CDY41077 Canola cytosol 90.83 89.95
KRG90988 Soybean cytosol 69.56 69.67
GSMUA_Achr10P... Banana cytosol 68.25 68.47
AT3G18060.1 Thale cress cytosol 67.76 67.98
GSMUA_Achr3P20980_001 Banana cytosol 63.99 67.3
KRH35765 Soybean golgi 47.14 66.06
Zm00001d014053_P001 Maize cytosol 27.5 63.88
Os01t0125800-01 Rice plasma membrane 63.34 63.44
HORVU3Hr1G004510.1 Barley cytosol 63.18 63.18
TraesCS3A01G047800.1 Wheat cytosol 63.01 63.11
Zm00001d040038_P001 Maize cytosol, extracellular 63.01 63.11
TraesCS3B01G034400.1 Wheat cytosol, golgi 62.52 62.62
TraesCS3D01G031900.1 Wheat cytosol 62.52 62.62
Zm00001d008768_P001 Maize cytosol 17.51 61.85
Zm00001d038078_P001 Maize cytosol 17.51 61.85
Zm00001d008517_P001 Maize cytosol 62.85 60.19
HORVU3Hr1G021490.1 Barley cytosol 4.09 58.14
KXG32003 Sorghum cytosol 62.68 56.91
Zm00001d047714_P001 Maize plasma membrane 27.66 56.9
Zm00001d042097_P001 Maize cytosol 6.38 54.93
Zm00001d029295_P001 Maize cytosol 7.86 30.19
Protein Annotations
Gene3D:2.130.10.10MapMan:35.1EntrezGene:814661ProteinID:AAD14533.1ProteinID:AEC05436.1ArrayExpress:AT2G01330
EnsemblPlantsGene:AT2G01330RefSeq:AT2G01330TAIR:AT2G01330RefSeq:AT2G01330-TAIR-GEnsemblPlants:AT2G01330.1TAIR:AT2G01330.1
Unigene:At.42501GO:GO:0003674GO:GO:0003779GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005856GO:GO:0008150GO:GO:0009987
GO:GO:0016043GO:GO:0030042GO:GO:0030836GO:GO:0030864GO:GO:0042643GO:GO:0051015
GO:GO:0080008InterPro:IPR001680InterPro:IPR015943InterPro:IPR017986RefSeq:NP_178242.3PFAM:PF00400
PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001016
PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281ScanProsite:PS00678PFscan:PS50082
PFscan:PS50294PANTHER:PTHR19856PANTHER:PTHR19856:SF4UniProt:Q9ZU34SMART:SM00320SUPFAM:SSF50978
UniParc:UPI00000A615FInterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeatInterPro:WD40_repeat_CSInterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sf
Description
AIP1-1Actin-interacting protein 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU34]
Coordinates
chr2:-:158183..160870
Molecular Weight (calculated)
66390.7 Da
IEP (calculated)
6.410
GRAVY (calculated)
-0.131
Length
611 amino acids
Sequence
(BLAST)
001: MAKLLETFPC VPSTERGRGI LISGDSKSDT ILYCNGRSVF IRSLRQLQDV QVYGEHGYAV TVARYSPNGE WIASADVSGT VRVWGTHNGF VLKNEFRVLA
101: GRVDDLQWSF DGLRIVASGD GKGKSLVRSF AWDSGNTMGD FDGHSRRVLS CAFKPTRPFR IATCGEDFLV NFYDGPPFKF HSSHREHSNF VNCIRYSPDG
201: TKFITVSSDK KGMIYDGKTG DKVGELASED GHKGSIYAVS WSPDSKRVLT VSADKSAKVW EVAEDGTIGS VIKTLSFMES GGAEDMLVGC LWQNDHLITV
301: SLGGTMSLFS ADDMDKPPLL LSGHIKNVTS LAVLGENQKT ILSCSYDGLI VKWLKGVGYS CKLQMKDTKI KRLAATESSI FISGYDNMVW RIPLTDNGYG
401: AAEHVDIGHQ PLDISIAVDS PEATALVSFD SGVVLLNGLN ILSKIDLGFA VAASVISPDG KEAIVGGQDG KLHIYSVSGD NNLKEEAVLE KHRGALTVIR
501: YSPDLTMFAS GDANREAVVW DRETKQVKLN NMLFHTARIN SLAWSPNNKM VATGSIDTCV IVYEVDKPAS SRITARNAHL GGVNAVAFID DCTVASSGED
601: ASVRLWHIEP Q
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.