CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90988	Soybean	cytosol	88.76	63.44
Zm00001d038078_P001	Maize	cytosol	24.08	60.69
Zm00001d008768_P001	Maize	cytosol	24.08	60.69
Zm00001d042097_P001	Maize	cytosol	9.86	60.56
Zm00001d014053_P001	Maize	cytosol	35.09	58.17
Zm00001d047714_P001	Maize	plasma membrane	36.93	54.21
GSMUA_Achr10P...	Banana	cytosol	69.04	49.43
GSMUA_Achr3P20980_001	Banana	cytosol	63.99	48.02
KRH41795	Soybean	cytosol, endoplasmic reticulum, nucleus	66.74	47.7
KRH60498	Soybean	cytosol	66.28	47.38
AT2G01330.1	Thale cress	cytosol	66.06	47.14
TraesCS3A01G047800.1	Wheat	cytosol	65.6	46.89
CDY25939	Canola	cytosol	66.06	46.68
TraesCS3D01G031900.1	Wheat	cytosol	65.14	46.56
Bra017456.1-P	Field mustard	cytosol	65.83	46.52
CDY41077	Canola	cytosol	65.83	46.52
HORVU3Hr1G004510.1	Barley	cytosol	64.91	46.32
TraesCS3B01G034400.1	Wheat	cytosol, golgi	64.68	46.23
Os01t0125800-01	Rice	plasma membrane	64.45	46.07
Zm00001d040038_P001	Maize	cytosol, extracellular	63.76	45.57
Zm00001d008517_P001	Maize	cytosol	63.99	43.73
KXG32003	Sorghum	cytosol	63.99	41.46
Zm00001d029295_P001	Maize	cytosol	11.93	32.7
HORVU3Hr1G021490.1	Barley	cytosol	2.29	23.26

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	EMBL:ACUP02006703	EnsemblPlantsGene:GLYMA_10G263900	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0030042	GO:GO:0030836	GO:GO:0030864
GO:GO:0042643	GO:GO:0051015	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	UniProt:K7LLJ5
EnsemblPlants:KRH35765	ProteinID:KRH35765	ProteinID:KRH35765.1	PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR19856	PANTHER:PTHR19856:SF4	SMART:SM00320	SUPFAM:SSF50978	SignalP:SignalP-noTM
UniParc:UPI0002952112	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:48814987..48821601

Molecular Weight (calculated)

48051.6 Da

IEP (calculated)

7.428

GRAVY (calculated)

-0.035

Length

436 amino acids

Sequence
(BLAST)

001: MSFLHGLLKK LLFDMILLTI KSKSQFDNGD ILISGDAKTN NILYCTGRSV IIRNLDNPLQ VWVYCEHAYP VTVARYSPNG EWIAYADVSG TVRIWGTHIE
101: FVLKNEIVAC GDGKGKSFVR AFMWDSGSTV GDFDGHSHRV LSCAFKTTRP FRIVTCGEDF LANFYDGPPF KFNMSIRDHT NFVNCVRFSP DGSKFITVSS
201: GRKGTIYDGK TGNKLGELSM EDGHKGSIYA VSWSPDSKQV LTVSADKSAK VWDIVEDGSS GTVNKTLTCT ESGGVEDMLV GRLWQNDYLL TICLGGTTYL
301: YSAKDLDKSP LSLSGHMKNI TVLTMLNRSE KMLLSSSYDG VVIRWIPGMG YIVLNNMLFN TARINCLAWS PDSTLIAPGS LDTCVIIYEV GKPASSRRTI
401: KGAHIGGVYG LVFIDQERVV SSGEDGCVRV WNLISE

Best Arabidopsis Sequence Match ( AT2G01330.1 )
(BLAST)

001: MAKLLETFPC VPSTERGRGI LISGDSKSDT ILYCNGRSVF IRSLRQLQDV QVYGEHGYAV TVARYSPNGE WIASADVSGT VRVWGTHNGF VLKNEFRVLA
101: GRVDDLQWSF DGLRIVASGD GKGKSLVRSF AWDSGNTMGD FDGHSRRVLS CAFKPTRPFR IATCGEDFLV NFYDGPPFKF HSSHREHSNF VNCIRYSPDG
201: TKFITVSSDK KGMIYDGKTG DKVGELASED GHKGSIYAVS WSPDSKRVLT VSADKSAKVW EVAEDGTIGS VIKTLSFMES GGAEDMLVGC LWQNDHLITV
301: SLGGTMSLFS ADDMDKPPLL LSGHIKNVTS LAVLGENQKT ILSCSYDGLI VKWLKGVGYS CKLQMKDTKI KRLAATESSI FISGYDNMVW RIPLTDNGYG
401: AAEHVDIGHQ PLDISIAVDS PEATALVSFD SGVVLLNGLN ILSKIDLGFA VAASVISPDG KEAIVGGQDG KLHIYSVSGD NNLKEEAVLE KHRGALTVIR
501: YSPDLTMFAS GDANREAVVW DRETKQVKLN NMLFHTARIN SLAWSPNNKM VATGSIDTCV IVYEVDKPAS SRITARNAHL GGVNAVAFID DCTVASSGED
601: ASVRLWHIEP Q

Arabidopsis Description

AIP1-1Actin-interacting protein 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU34]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.