CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014053_P001	Maize	cytosol	36.55	93.54
Zm00001d008517_P001	Maize	cytosol	87.82	92.63
Os01t0125800-01	Rice	plasma membrane	83.36	91.97
TraesCS3A01G047800.1	Wheat	cytosol	78.31	86.39
TraesCS3D01G031900.1	Wheat	cytosol	78.31	86.39
HORVU3Hr1G004510.1	Barley	cytosol	78.31	86.25
TraesCS3B01G034400.1	Wheat	cytosol, golgi	78.16	86.23
Zm00001d047714_P001	Maize	plasma membrane	37.0	83.84
Zm00001d008768_P001	Maize	cytosol	21.25	82.66
Zm00001d038078_P001	Maize	cytosol	21.25	82.66
GSMUA_Achr10P...	Banana	cytosol	68.65	75.86
GSMUA_Achr3P20980_001	Banana	cytosol	63.0	72.98
VIT_17s0000g02670.t01	Wine grape	cytosol	65.08	71.92
Solyc03g119090.2.1	Tomato	cytosol, extracellular	62.85	69.46
PGSC0003DMT400014412	Potato	cytosol	62.7	69.29
KRH60498	Soybean	cytosol	62.7	69.18
KRH41795	Soybean	cytosol, endoplasmic reticulum, nucleus	62.56	69.02
AT3G18060.1	Thale cress	cytosol	62.11	68.64
CDY49616	Canola	cytosol	56.61	68.28
Bra022278.1-P	Field mustard	cytosol	60.92	67.32
KRG90988	Soybean	cytosol	60.92	67.21
CDX92192	Canola	cytosol	58.69	66.28
HORVU3Hr1G021490.1	Barley	cytosol	4.16	65.12
KRH35765	Soybean	golgi	41.46	63.99
AT2G01330.1	Thale cress	cytosol	56.91	62.68
CDY25939	Canola	cytosol	56.31	61.43
CDY41077	Canola	cytosol	56.17	61.26
Bra017456.1-P	Field mustard	cytosol	56.17	61.26

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	UniProt:A0A1B6Q258	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	EnsemblPlants:KXG32003	ProteinID:KXG32003	ProteinID:KXG32003.1
PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19856	PANTHER:PTHR19856:SF4
SMART:SM00320	EnsemblPlantsGene:SORBI_3003G089100	SUPFAM:SSF50978	UniParc:UPI00081ABC24	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:7755435..7764805

Molecular Weight (calculated)

73286.7 Da

IEP (calculated)

7.937

GRAVY (calculated)

-0.238

Length

673 amino acids

Sequence
(BLAST)

001: MMTSVSLTCG VPPAERAEKN CYGTHSFIHT DYSGTCISTT TPVRHSLPSR DLRSRDARRK KKKMAQLVET YACSPATERG RGILLAGDPK TDTIAYCTGR
101: SVIIRRLDAP LDAWAYQDHA YPTTVARFSP NGEWVASADA SGCVRVWGRY GDRALKAEFR PLSGRVDDLR WSPDGLRIVV SGDGKGKSFV RAFVWDSGST
201: VGEFDGHSKR VLSCDFKPTR PFRIVTCGED FLANFYEGPP FKFKHSIRDH SNFVNCIRYA PDGSKFITVS SDKKGLIYDG KTGEKIGELS TEGGHTGSIY
301: AVSWSSDSKQ VLTVSADKSA KVWDIMEDAS GKLNRTLACP GIGGVDDMLV GCLWQNDHLV TVSLGGTFNV FSASNPDQEP VTFAGHLKTV SSLVFFTKSS
401: PRTILSTSYD GVIMRWILGV GFGGRLTRKN NTQIKCFAAV EEELVTSGYD NKVFRIPLNG DQCGDAESVD VGGQPNALNL ALQKPEFALI TTDSGIVLLH
501: NSKVISTTKV NYTITSSSVS PDGTEAVVGA QDGKLRIYSI SGDTLTEEAL LEKHRGAITS IHYSPDVSMF ASADSNREAV VWDRASREIK LKNMLYHTAR
601: INSLAWSPDS RLVATGSLDT CAIVYEIDKP ATSRITIKGA HLGGVHGLTF LENDTLVTAG EDACIRVWKV VQQ

Best Arabidopsis Sequence Match ( AT3G18060.1 )
(BLAST)

001: MELSETYACV PSTERGRGIL ISGNSKSDTI LYTNGRSVVT LDLNNPLKVS IYGEHAYPAT VARYSPNGEW IASGDVSGTV RIWGAYNDHV LKNEFKVLAG
101: RIDDLQWSAD GMRIVASGDG KGKSLVRAFM WDSGSNVGEF DGHSRRVLSC AIKPTRPFRI VTCGEDFLVN FYEGPPFKFK LSSREHSNFV NCVRFAPDGS
201: KFITVSSDKK GIIYDGKTCE ILGELSSDDG HKGSIYAVSW SPDGKQVLTV SADKSAKIWD ISDNGSGSLN TTLNCPGSSG GVDDMLVGCL WQNDHIVTVS
301: LGGTISIFSA SDLDKSPFQF SGHMKNVSSL AVLKGNADYI LSGSYDGLIC KWMLGRGFCG KLQRTQNSQI KCFAAHEEEI VTSGYDNKIS RISYKDDQCT
401: NEESIDIGNQ PKDLSLAPLS PDLLLVTFES GVVFLRDGKV VSTINLGFIV TALAVTPDGT EAVIGGQDGK LHLYSINGDS LTEEAVLERH RGAISVIRYS
501: PDLSMFASAD LNREAVVWDR VSREMKLKNM LYHSARINCL AWSPNSTMVA TGSLDTCVIV YEVDKPASSR MTIKGAHLGG VYGLGFADDS HVVSSGEDAC
601: IRVWSFTPQ

Arabidopsis Description

AIP1-2Actin-interacting protein 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV35]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.