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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92192 Canola cytosol 89.16 91.11
Bra022278.1-P Field mustard cytosol 90.97 90.97
CDY49616 Canola cytosol 83.09 90.68
VIT_17s0000g02670.t01 Wine grape cytosol 77.83 77.83
PGSC0003DMT400014412 Potato cytosol 76.52 76.52
Solyc03g119090.2.1 Tomato cytosol, extracellular 76.03 76.03
KRH41795 Soybean cytosol, endoplasmic reticulum, nucleus 75.53 75.41
KRH60498 Soybean cytosol 75.53 75.41
GSMUA_Achr10P... Banana cytosol 72.25 72.25
Zm00001d014053_P001 Maize cytosol 30.71 71.1
GSMUA_Achr3P20980_001 Banana cytosol 67.82 71.08
Zm00001d040038_P001 Maize cytosol, extracellular 68.31 68.2
AT2G01330.1 Thale cress cytosol 67.98 67.76
Os01t0125800-01 Rice plasma membrane 67.49 67.38
TraesCS3B01G034400.1 Wheat cytosol, golgi 66.17 66.07
HORVU3Hr1G004510.1 Barley cytosol 66.17 65.96
TraesCS3D01G031900.1 Wheat cytosol 66.01 65.9
Zm00001d008768_P001 Maize cytosol 18.72 65.9
Zm00001d038078_P001 Maize cytosol 18.72 65.9
TraesCS3A01G047800.1 Wheat cytosol 65.52 65.41
Zm00001d008517_P001 Maize cytosol 68.14 65.05
Zm00001d047714_P001 Maize plasma membrane 30.71 62.96
KXG32003 Sorghum cytosol 68.64 62.11
Zm00001d042097_P001 Maize cytosol 7.06 60.56
HORVU3Hr1G021490.1 Barley cytosol 4.11 58.14
Zm00001d029295_P001 Maize cytosol 8.7 33.33
Protein Annotations
Gene3D:2.130.10.10MapMan:35.1EntrezGene:821331ProteinID:AEE76041.1ArrayExpress:AT3G18060EnsemblPlantsGene:AT3G18060
RefSeq:AT3G18060TAIR:AT3G18060RefSeq:AT3G18060-TAIR-GEnsemblPlants:AT3G18060.1TAIR:AT3G18060.1EMBL:AY062436
EMBL:AY114624Unigene:At.27343ProteinID:BAB02018.1GO:GO:0003674GO:GO:0003779GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829
GO:GO:0005856GO:GO:0008150GO:GO:0009987GO:GO:0016043GO:GO:0030042GO:GO:0030836
GO:GO:0030864GO:GO:0042643GO:GO:0051015GO:GO:0080008InterPro:IPR001680InterPro:IPR015943
InterPro:IPR017986InterPro:N2O_reductase_NRefSeq:NP_188434.2PFAM:PF00400PO:PO:0000005PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001017PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281
ScanProsite:PS00678PFscan:PS50082PFscan:PS50294PANTHER:PTHR19856PANTHER:PTHR19856:SF4UniProt:Q9LV35
SMART:SM00320SUPFAM:SSF50974SUPFAM:SSF50978UniParc:UPI00000A82A5InterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeat
InterPro:WD40_repeat_CSInterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sfSEG:seg::
Description
AIP1-2Actin-interacting protein 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV35]
Coordinates
chr3:+:6183612..6187151
Molecular Weight (calculated)
66045.0 Da
IEP (calculated)
5.782
GRAVY (calculated)
-0.149
Length
609 amino acids
Sequence
(BLAST)
001: MELSETYACV PSTERGRGIL ISGNSKSDTI LYTNGRSVVT LDLNNPLKVS IYGEHAYPAT VARYSPNGEW IASGDVSGTV RIWGAYNDHV LKNEFKVLAG
101: RIDDLQWSAD GMRIVASGDG KGKSLVRAFM WDSGSNVGEF DGHSRRVLSC AIKPTRPFRI VTCGEDFLVN FYEGPPFKFK LSSREHSNFV NCVRFAPDGS
201: KFITVSSDKK GIIYDGKTCE ILGELSSDDG HKGSIYAVSW SPDGKQVLTV SADKSAKIWD ISDNGSGSLN TTLNCPGSSG GVDDMLVGCL WQNDHIVTVS
301: LGGTISIFSA SDLDKSPFQF SGHMKNVSSL AVLKGNADYI LSGSYDGLIC KWMLGRGFCG KLQRTQNSQI KCFAAHEEEI VTSGYDNKIS RISYKDDQCT
401: NEESIDIGNQ PKDLSLAPLS PDLLLVTFES GVVFLRDGKV VSTINLGFIV TALAVTPDGT EAVIGGQDGK LHLYSINGDS LTEEAVLERH RGAISVIRYS
501: PDLSMFASAD LNREAVVWDR VSREMKLKNM LYHSARINCL AWSPNSTMVA TGSLDTCVIV YEVDKPASSR MTIKGAHLGG VYGLGFADDS HVVSSGEDAC
601: IRVWSFTPQ
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.