Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX92192 | Canola | cytosol | 89.16 | 91.11 |
Bra022278.1-P | Field mustard | cytosol | 90.97 | 90.97 |
CDY49616 | Canola | cytosol | 83.09 | 90.68 |
VIT_17s0000g02670.t01 | Wine grape | cytosol | 77.83 | 77.83 |
PGSC0003DMT400014412 | Potato | cytosol | 76.52 | 76.52 |
Solyc03g119090.2.1 | Tomato | cytosol, extracellular | 76.03 | 76.03 |
KRH41795 | Soybean | cytosol, endoplasmic reticulum, nucleus | 75.53 | 75.41 |
KRH60498 | Soybean | cytosol | 75.53 | 75.41 |
GSMUA_Achr10P... | Banana | cytosol | 72.25 | 72.25 |
Zm00001d014053_P001 | Maize | cytosol | 30.71 | 71.1 |
GSMUA_Achr3P20980_001 | Banana | cytosol | 67.82 | 71.08 |
Zm00001d040038_P001 | Maize | cytosol, extracellular | 68.31 | 68.2 |
AT2G01330.1 | Thale cress | cytosol | 67.98 | 67.76 |
Os01t0125800-01 | Rice | plasma membrane | 67.49 | 67.38 |
TraesCS3B01G034400.1 | Wheat | cytosol, golgi | 66.17 | 66.07 |
HORVU3Hr1G004510.1 | Barley | cytosol | 66.17 | 65.96 |
TraesCS3D01G031900.1 | Wheat | cytosol | 66.01 | 65.9 |
Zm00001d008768_P001 | Maize | cytosol | 18.72 | 65.9 |
Zm00001d038078_P001 | Maize | cytosol | 18.72 | 65.9 |
TraesCS3A01G047800.1 | Wheat | cytosol | 65.52 | 65.41 |
Zm00001d008517_P001 | Maize | cytosol | 68.14 | 65.05 |
Zm00001d047714_P001 | Maize | plasma membrane | 30.71 | 62.96 |
KXG32003 | Sorghum | cytosol | 68.64 | 62.11 |
Zm00001d042097_P001 | Maize | cytosol | 7.06 | 60.56 |
HORVU3Hr1G021490.1 | Barley | cytosol | 4.11 | 58.14 |
Zm00001d029295_P001 | Maize | cytosol | 8.7 | 33.33 |
Protein Annotations
Gene3D:2.130.10.10 | MapMan:35.1 | EntrezGene:821331 | ProteinID:AEE76041.1 | ArrayExpress:AT3G18060 | EnsemblPlantsGene:AT3G18060 |
RefSeq:AT3G18060 | TAIR:AT3G18060 | RefSeq:AT3G18060-TAIR-G | EnsemblPlants:AT3G18060.1 | TAIR:AT3G18060.1 | EMBL:AY062436 |
EMBL:AY114624 | Unigene:At.27343 | ProteinID:BAB02018.1 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030042 | GO:GO:0030836 |
GO:GO:0030864 | GO:GO:0042643 | GO:GO:0051015 | GO:GO:0080008 | InterPro:IPR001680 | InterPro:IPR015943 |
InterPro:IPR017986 | InterPro:N2O_reductase_N | RefSeq:NP_188434.2 | PFAM:PF00400 | PO:PO:0000005 | PO:PO:0000013 |
PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19856 | PANTHER:PTHR19856:SF4 | UniProt:Q9LV35 |
SMART:SM00320 | SUPFAM:SSF50974 | SUPFAM:SSF50978 | UniParc:UPI00000A82A5 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : |
Description
AIP1-2Actin-interacting protein 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV35]
Coordinates
chr3:+:6183612..6187151
Molecular Weight (calculated)
66045.0 Da
IEP (calculated)
5.782
GRAVY (calculated)
-0.149
Length
609 amino acids
Sequence
(BLAST)
(BLAST)
001: MELSETYACV PSTERGRGIL ISGNSKSDTI LYTNGRSVVT LDLNNPLKVS IYGEHAYPAT VARYSPNGEW IASGDVSGTV RIWGAYNDHV LKNEFKVLAG
101: RIDDLQWSAD GMRIVASGDG KGKSLVRAFM WDSGSNVGEF DGHSRRVLSC AIKPTRPFRI VTCGEDFLVN FYEGPPFKFK LSSREHSNFV NCVRFAPDGS
201: KFITVSSDKK GIIYDGKTCE ILGELSSDDG HKGSIYAVSW SPDGKQVLTV SADKSAKIWD ISDNGSGSLN TTLNCPGSSG GVDDMLVGCL WQNDHIVTVS
301: LGGTISIFSA SDLDKSPFQF SGHMKNVSSL AVLKGNADYI LSGSYDGLIC KWMLGRGFCG KLQRTQNSQI KCFAAHEEEI VTSGYDNKIS RISYKDDQCT
401: NEESIDIGNQ PKDLSLAPLS PDLLLVTFES GVVFLRDGKV VSTINLGFIV TALAVTPDGT EAVIGGQDGK LHLYSINGDS LTEEAVLERH RGAISVIRYS
501: PDLSMFASAD LNREAVVWDR VSREMKLKNM LYHSARINCL AWSPNSTMVA TGSLDTCVIV YEVDKPASSR MTIKGAHLGG VYGLGFADDS HVVSSGEDAC
601: IRVWSFTPQ
101: RIDDLQWSAD GMRIVASGDG KGKSLVRAFM WDSGSNVGEF DGHSRRVLSC AIKPTRPFRI VTCGEDFLVN FYEGPPFKFK LSSREHSNFV NCVRFAPDGS
201: KFITVSSDKK GIIYDGKTCE ILGELSSDDG HKGSIYAVSW SPDGKQVLTV SADKSAKIWD ISDNGSGSLN TTLNCPGSSG GVDDMLVGCL WQNDHIVTVS
301: LGGTISIFSA SDLDKSPFQF SGHMKNVSSL AVLKGNADYI LSGSYDGLIC KWMLGRGFCG KLQRTQNSQI KCFAAHEEEI VTSGYDNKIS RISYKDDQCT
401: NEESIDIGNQ PKDLSLAPLS PDLLLVTFES GVVFLRDGKV VSTINLGFIV TALAVTPDGT EAVIGGQDGK LHLYSINGDS LTEEAVLERH RGAISVIRYS
501: PDLSMFASAD LNREAVVWDR VSREMKLKNM LYHSARINCL AWSPNSTMVA TGSLDTCVIV YEVDKPASSR MTIKGAHLGG VYGLGFADDS HVVSSGEDAC
601: IRVWSFTPQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.