Factsheet for HORVU3Hr1G021490.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G034400.1	Wheat	cytosol, golgi	79.07	5.57
HORVU3Hr1G004510.1	Barley	cytosol	79.07	5.56
TraesCS3D01G031900.1	Wheat	cytosol	76.74	5.41
TraesCS3A01G047800.1	Wheat	cytosol	74.42	5.25
GSMUA_Achr3P20980_001	Banana	cytosol	65.12	4.82
Zm00001d040038_P001	Maize	cytosol, extracellular	67.44	4.75
CDY49616	Canola	cytosol	60.47	4.66
PGSC0003DMT400014412	Potato	cytosol	65.12	4.6
Os01t0125800-01	Rice	plasma membrane	65.12	4.59
VIT_17s0000g02670.t01	Wine grape	cytosol	62.79	4.43
GSMUA_Achr10P...	Banana	cytosol	62.79	4.43
Solyc03g119090.2.1	Tomato	cytosol, extracellular	62.79	4.43
KRG90988	Soybean	cytosol	62.79	4.43
KRH41795	Soybean	cytosol, endoplasmic reticulum, nucleus	62.79	4.43
KRH60498	Soybean	cytosol	62.79	4.43
Zm00001d008517_P001	Maize	cytosol	65.12	4.39
Bra022278.1-P	Field mustard	cytosol	60.47	4.27
CDX92192	Canola	cytosol	58.14	4.19
KXG32003	Sorghum	cytosol	65.12	4.16
AT3G18060.1	Thale cress	cytosol	58.14	4.11
AT2G01330.1	Thale cress	cytosol	58.14	4.09
CDY41077	Canola	cytosol	58.14	4.05
CDY25939	Canola	cytosol	58.14	4.05
Bra017456.1-P	Field mustard	cytosol	58.14	4.05
KRH35765	Soybean	golgi	23.26	2.29
Zm00001d047714_P001	Maize	plasma membrane	6.98	1.01
Zm00001d008768_P001	Maize	cytosol	0.0	0.0
Zm00001d014053_P001	Maize	cytosol	0.0	0.0
Zm00001d038078_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU3Hr1G021490.1	EnsemblPlantsGene:HORVU3Hr1G021490	Gene3D:2.130.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015943	InterPro:WD40/YVTN_repeat-like_dom_sf	UniParc:UPI000B4805B3	UniProt:A0A287KDQ1	MapMan:35.2	:

Description

No Description!

Coordinates

chrchr3H:-:71397672..71402350

Molecular Weight (calculated)

5009.0 Da

IEP (calculated)

12.053

GRAVY (calculated)

-0.691

Length

43 amino acids

Sequence
(BLAST)

1: MFASADSNRE AAAWDRATRE VKVKNMLFHT ARVRNFPCAR RRA

Best Arabidopsis Sequence Match ( AT2G01330.1 )
(BLAST)

001: MAKLLETFPC VPSTERGRGI LISGDSKSDT ILYCNGRSVF IRSLRQLQDV QVYGEHGYAV TVARYSPNGE WIASADVSGT VRVWGTHNGF VLKNEFRVLA
101: GRVDDLQWSF DGLRIVASGD GKGKSLVRSF AWDSGNTMGD FDGHSRRVLS CAFKPTRPFR IATCGEDFLV NFYDGPPFKF HSSHREHSNF VNCIRYSPDG
201: TKFITVSSDK KGMIYDGKTG DKVGELASED GHKGSIYAVS WSPDSKRVLT VSADKSAKVW EVAEDGTIGS VIKTLSFMES GGAEDMLVGC LWQNDHLITV
301: SLGGTMSLFS ADDMDKPPLL LSGHIKNVTS LAVLGENQKT ILSCSYDGLI VKWLKGVGYS CKLQMKDTKI KRLAATESSI FISGYDNMVW RIPLTDNGYG
401: AAEHVDIGHQ PLDISIAVDS PEATALVSFD SGVVLLNGLN ILSKIDLGFA VAASVISPDG KEAIVGGQDG KLHIYSVSGD NNLKEEAVLE KHRGALTVIR
501: YSPDLTMFAS GDANREAVVW DRETKQVKLN NMLFHTARIN SLAWSPNNKM VATGSIDTCV IVYEVDKPAS SRITARNAHL GGVNAVAFID DCTVASSGED
601: ASVRLWHIEP Q

Arabidopsis Description

AIP1-1Actin-interacting protein 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU34]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.