Factsheet for Zm00001d038078_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008768_P001	Maize	cytosol	100.0	100.0
Zm00001d014053_P001	Maize	cytosol	79.77	52.47
Zm00001d047714_P001	Maize	plasma membrane	82.08	47.81
KRH35765	Soybean	golgi	60.69	24.08
Zm00001d040038_P001	Maize	cytosol, extracellular	82.66	23.44
Zm00001d008517_P001	Maize	cytosol	84.97	23.04
Os01t0125800-01	Rice	plasma membrane	79.19	22.46
HORVU3Hr1G004510.1	Barley	cytosol	76.88	21.77
TraesCS3D01G031900.1	Wheat	cytosol	75.72	21.48
TraesCS3B01G034400.1	Wheat	cytosol, golgi	75.72	21.48
TraesCS3A01G047800.1	Wheat	cytosol	75.14	21.31
KXG32003	Sorghum	cytosol	82.66	21.25
GSMUA_Achr3P20980_001	Banana	cytosol	68.79	20.48
GSMUA_Achr10P...	Banana	cytosol	69.94	19.87
VIT_17s0000g02670.t01	Wine grape	cytosol	68.21	19.38
Solyc03g119090.2.1	Tomato	cytosol, extracellular	66.47	18.88
AT3G18060.1	Thale cress	cytosol	65.9	18.72
KRH60498	Soybean	cytosol	65.9	18.69
KRH41795	Soybean	cytosol, endoplasmic reticulum, nucleus	65.9	18.69
Bra022278.1-P	Field mustard	cytosol	65.32	18.55
PGSC0003DMT400014412	Potato	cytosol	64.74	18.39
KRG90988	Soybean	cytosol	63.58	18.03
CDY49616	Canola	cytosol	57.8	17.92
CDY41077	Canola	cytosol	63.01	17.67
Bra017456.1-P	Field mustard	cytosol	63.01	17.67
AT2G01330.1	Thale cress	cytosol	61.85	17.51
CDY25939	Canola	cytosol	62.43	17.5
CDX92192	Canola	cytosol	58.38	16.95
Zm00001d042097_P001	Maize	cytosol	4.05	9.86
Zm00001d029295_P001	Maize	cytosol	7.51	8.18
HORVU3Hr1G021490.1	Barley	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	UniProt:A0A1D6FFD3	ProteinID:AQK85567.1	ProteinID:AQK90648.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19856	PANTHER:PTHR19856:SF4	SMART:SM00320
SUPFAM:SSF50978	UniParc:UPI0008443211	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	EnsemblPlantsGene:Zm00001d038078	EnsemblPlants:Zm00001d038078_P001	EnsemblPlants:Zm00001d038078_T001	:	:

Description

Actin-interacting protein 1-2

Coordinates

chr6:-:147030922..147034036

Molecular Weight (calculated)

18920.3 Da

IEP (calculated)

5.534

GRAVY (calculated)

-0.247

Length

173 amino acids

Sequence
(BLAST)

001: MHLRSEPQCW KFKGMGELPG PGCVFHIFQF TLHFRDHSNF VNCIRYAPDG SKFITVSSDK KGLIYDGKTG EKIGELSTEG GHTGSIYAVS WNPDSKQVLT
101: VSADKSAKVW DIFEDASGKL NRTLVCPGIG GVDDMLVGCL WQNDHLVTVS LGGTFNVFSA SNPDQEPVTF EDG

Best Arabidopsis Sequence Match ( AT2G01330.1 )
(BLAST)

001: MAKLLETFPC VPSTERGRGI LISGDSKSDT ILYCNGRSVF IRSLRQLQDV QVYGEHGYAV TVARYSPNGE WIASADVSGT VRVWGTHNGF VLKNEFRVLA
101: GRVDDLQWSF DGLRIVASGD GKGKSLVRSF AWDSGNTMGD FDGHSRRVLS CAFKPTRPFR IATCGEDFLV NFYDGPPFKF HSSHREHSNF VNCIRYSPDG
201: TKFITVSSDK KGMIYDGKTG DKVGELASED GHKGSIYAVS WSPDSKRVLT VSADKSAKVW EVAEDGTIGS VIKTLSFMES GGAEDMLVGC LWQNDHLITV
301: SLGGTMSLFS ADDMDKPPLL LSGHIKNVTS LAVLGENQKT ILSCSYDGLI VKWLKGVGYS CKLQMKDTKI KRLAATESSI FISGYDNMVW RIPLTDNGYG
401: AAEHVDIGHQ PLDISIAVDS PEATALVSFD SGVVLLNGLN ILSKIDLGFA VAASVISPDG KEAIVGGQDG KLHIYSVSGD NNLKEEAVLE KHRGALTVIR
501: YSPDLTMFAS GDANREAVVW DRETKQVKLN NMLFHTARIN SLAWSPNNKM VATGSIDTCV IVYEVDKPAS SRITARNAHL GGVNAVAFID DCTVASSGED
601: ASVRLWHIEP Q

Arabidopsis Description

AIP1-1Actin-interacting protein 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU34]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.