Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
EES08028 | Sorghum | cytosol | 99.47 | 99.47 |
Os11t0163100-01 | Rice | nucleus, plasma membrane, plastid | 98.94 | 98.94 |
TraesCS5B01G124100.1 | Wheat | cytosol | 98.67 | 98.67 |
Zm00001d032480_P002 | Maize | plasma membrane, plastid | 98.14 | 98.14 |
Zm00001d013873_P001 | Maize | plasma membrane, plastid | 97.88 | 97.88 |
AT5G09810.1 | Thale cress | cytosol | 97.88 | 97.88 |
CDX69885 | Canola | cytosol | 97.61 | 97.61 |
CDY21607 | Canola | cytosol | 97.61 | 97.61 |
CDX85794 | Canola | cytosol | 91.25 | 97.45 |
CDY40061 | Canola | cytosol | 91.25 | 97.45 |
CDY31972 | Canola | cytosol | 91.25 | 97.45 |
CDY30296 | Canola | cytosol | 91.25 | 97.45 |
Bra028615.1-P | Field mustard | cytosol | 97.35 | 97.35 |
Zm00001d011086_P005 | Maize | cytosol | 97.35 | 97.35 |
VIT_12s0178g00200.t01 | Wine grape | cytosol | 97.35 | 97.35 |
Zm00001d035720_P002 | Maize | cytosol | 97.35 | 97.35 |
Bra009081.1-P | Field mustard | cytosol | 90.98 | 97.17 |
CDX81140 | Canola | cytosol | 97.08 | 97.08 |
Zm00001d013410_P001 | Maize | cytosol | 97.08 | 97.08 |
CDY56544 | Canola | cytosol | 97.08 | 97.08 |
Zm00001d033790_P001 | Maize | cytosol | 97.08 | 97.08 |
Solyc03g078400.2.1 | Tomato | nucleus, plastid | 96.82 | 96.82 |
PGSC0003DMT400047481 | Potato | cytosol | 96.82 | 96.82 |
KRH43389 | Soybean | cytosol | 96.82 | 96.82 |
KRH59535 | Soybean | cytosol | 96.82 | 96.82 |
KRH64098 | Soybean | cytosol | 96.82 | 96.82 |
Bra006033.1-P | Field mustard | cytosol | 96.82 | 96.82 |
KRH53856 | Soybean | endoplasmic reticulum, mitochondrion | 85.15 | 96.69 |
Solyc11g005330.1.1 | Tomato | nucleus | 96.29 | 96.29 |
PGSC0003DMT400010174 | Potato | cytosol | 96.29 | 96.29 |
PGSC0003DMT400076499 | Potato | cytosol | 49.07 | 95.85 |
Solyc01g104770.2.1 | Tomato | nucleus | 95.76 | 95.76 |
Zm00001d019635_P001 | Maize | cytosol | 35.01 | 95.65 |
Zm00001d035722_P007 | Maize | plasma membrane | 97.35 | 95.32 |
TraesCS5D01G132200.1 | Wheat | golgi | 93.37 | 94.88 |
Zm00001d012277_P001 | Maize | cytosol | 94.16 | 94.41 |
KRH43946 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 94.16 | 94.16 |
KRH10484 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 94.16 | 94.16 |
Zm00001d034761_P002 | Maize | cytosol | 97.35 | 93.62 |
Zm00001d042731_P002 | Maize | extracellular, plasma membrane, plastid | 93.37 | 93.62 |
Zm00001d016605_P001 | Maize | cytosol | 38.99 | 93.04 |
Solyc04g071260.2.1 | Tomato | plastid | 92.04 | 92.04 |
CDX99315 | Canola | cytosol | 78.78 | 91.95 |
AT1G49240.1 | Thale cress | cytosol | 91.78 | 91.78 |
CDX82326 | Canola | cytosol | 91.78 | 91.78 |
Zm00001d010159_P002 | Maize | extracellular, plasma membrane | 91.51 | 91.76 |
Bra022356.1-P | Field mustard | cytosol | 78.51 | 91.64 |
CDY18545 | Canola | cytosol | 91.51 | 91.51 |
AT3G18780.3 | Thale cress | cytosol | 91.51 | 91.51 |
CDY61982 | Canola | cytosol | 91.51 | 91.51 |
CDX92272 | Canola | cytosol | 91.51 | 91.51 |
CDX95498 | Canola | cytosol | 91.51 | 91.51 |
TraesCS5A01G124300.2 | Wheat | golgi | 98.67 | 90.95 |
CDX92271 | Canola | cytosol | 76.13 | 90.54 |
PGSC0003DMT400076501 | Potato | cytosol | 46.15 | 87.0 |
Zm00001d016508_P001 | Maize | cytosol | 31.57 | 86.23 |
Zm00001d008746_P001 | Maize | cytosol | 62.07 | 85.09 |
Bra037560.1-P | Field mustard | cytoskeleton, cytosol | 77.98 | 83.29 |
Zm00001d019396_P001 | Maize | cytosol | 36.6 | 82.14 |
Zm00001d011087_P001 | Maize | plastid | 97.35 | 80.84 |
Zm00001d007792_P001 | Maize | cytosol | 55.7 | 79.55 |
VIT_04s0044g00580.t01 | Wine grape | extracellular | 96.82 | 79.35 |
PGSC0003DMT400087294 | Potato | mitochondrion | 56.5 | 77.74 |
HORVU5Hr1G039850.3 | Barley | mitochondrion | 94.43 | 76.56 |
Zm00001d003298_P001 | Maize | cytosol | 53.32 | 76.43 |
Zm00001d004087_P001 | Maize | cytosol | 41.38 | 72.22 |
PGSC0003DMT400022210 | Potato | cytosol | 68.44 | 70.11 |
PGSC0003DMT400022205 | Potato | cytosol | 67.11 | 69.13 |
PGSC0003DMT400074882 | Potato | cytosol | 67.11 | 68.38 |
PGSC0003DMT400074887 | Potato | cytosol | 64.19 | 65.41 |
PGSC0003DMT400088088 | Potato | cytosol | 32.89 | 63.92 |
Zm00001d004855_P002 | Maize | cytoskeleton, cytosol, nucleus | 98.67 | 63.05 |
Zm00001d022558_P001 | Maize | cytosol | 45.89 | 44.47 |
Zm00001d034421_P004 | Maize | plastid | 46.15 | 37.18 |
Zm00001d027326_P001 | Maize | cytosol, extracellular, nucleus | 41.91 | 35.67 |
Zm00001d017106_P001 | Maize | cytosol | 38.99 | 33.95 |
Zm00001d049629_P002 | Maize | nucleus | 31.57 | 32.34 |
Zm00001d050981_P001 | Maize | cytosol | 38.46 | 31.59 |
Zm00001d014112_P003 | Maize | cytosol | 33.95 | 30.99 |
Zm00001d024059_P002 | Maize | cytosol | 33.69 | 29.53 |
Zm00001d008652_P001 | Maize | endoplasmic reticulum, plastid | 16.98 | 27.71 |
Protein Annotations
EntrezGene:100283878 | MapMan:20.2.1 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | ProteinID:AQK58879.1 | ProteinID:AQK58880.1 |
ProteinID:AQK58881.1 | ProteinID:AQK58882.1 | InterPro:Actin | InterPro:Actin/actin-like_CS | InterPro:Actin_CS | UniProt:B4FRH8 |
EMBL:BT039716 | EMBL:EU966244 | EMBL:EU969279 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005524 | PFAM:PF00022 | PRINTS:PR00190 | ScanProsite:PS00406 | ScanProsite:PS00432 | ScanProsite:PS01132 |
PANTHER:PTHR11937 | PANTHER:PTHR11937:SF252 | SMART:SM00268 | SUPFAM:SSF53067 | UniParc:UPI0000E64966 | EnsemblPlantsGene:Zm00001d053177 |
EnsemblPlants:Zm00001d053177_P004 | EnsemblPlants:Zm00001d053177_T004 | : | : | : | : |
Description
Actin-7
Coordinates
chr4:+:218290860..218293089
Molecular Weight (calculated)
41682.0 Da
IEP (calculated)
5.159
GRAVY (calculated)
-0.175
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: SFTTTAEREI VRDIKEKLAY VALDYDQELE NAKSSSSVEK SYELPDGQVI TIGAERFRCP EVLFQPSFIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KAEYDESGPA IVHRKCF
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: SFTTTAEREI VRDIKEKLAY VALDYDQELE NAKSSSSVEK SYELPDGQVI TIGAERFRCP EVLFQPSFIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KAEYDESGPA IVHRKCF
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: MFTTTAEREI VRDIKEKLAY VALDYEQELE TAKSSSSVEK NYELPDGQVI TIGAERFRCP EVLFQPSLIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KSEYDESGPS IVHRKCF
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: MFTTTAEREI VRDIKEKLAY VALDYEQELE TAKSSSSVEK NYELPDGQVI TIGAERFRCP EVLFQPSLIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KSEYDESGPS IVHRKCF
Arabidopsis Description
ACT7AtACT7 [Source:UniProtKB/TrEMBL;Acc:A0A178UEW4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.