Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P34320_001 | Banana | cytosol | 88.0 | 72.13 |
| Zm00001d008746_P001 | Maize | cytosol | 81.0 | 58.91 |
| Solyc01g104770.2.1 | Tomato | nucleus | 92.5 | 49.07 |
| VIT_12s0178g00200.t01 | Wine grape | cytosol | 90.0 | 47.75 |
| HORVU5Hr1G117900.1 | Barley | cytosol | 89.5 | 47.48 |
| TraesCS5D01G516200.1 | Wheat | cytosol | 89.5 | 47.48 |
| TraesCS5B01G516100.1 | Wheat | cytosol | 89.5 | 47.48 |
| TraesCS4A01G356100.2 | Wheat | cytosol | 89.5 | 47.23 |
| GSMUA_Achr2P16160_001 | Banana | cytosol | 89.0 | 47.21 |
| Os03t0836000-01 | Rice | plasma membrane, plastid | 89.0 | 47.21 |
| GSMUA_Achr6P25350_001 | Banana | cytosol | 88.5 | 46.95 |
| Os05t0106600-01 | Rice | nucleus | 88.5 | 46.95 |
| TraesCS5B01G124100.1 | Wheat | cytosol | 88.0 | 46.68 |
| GSMUA_Achr7P10410_001 | Banana | cytosol | 88.0 | 46.68 |
| GSMUA_Achr8P16150_001 | Banana | cytosol | 88.0 | 46.68 |
| PGSC0003DMT400047481 | Potato | cytosol | 88.0 | 46.68 |
| GSMUA_Achr9P03170_001 | Banana | cytosol | 87.5 | 46.54 |
| PGSC0003DMT400010174 | Potato | cytosol | 87.5 | 46.42 |
| Os11t0163100-01 | Rice | nucleus, plasma membrane, plastid | 87.5 | 46.42 |
| TraesCS1D01G020000.1 | Wheat | cytosol | 87.5 | 46.42 |
| TraesCS1B01G024500.1 | Wheat | golgi, nucleus | 87.5 | 46.42 |
| PGSC0003DMT400071331 | Potato | cytosol | 87.5 | 46.42 |
| EER90564 | Sorghum | cytosol | 87.5 | 46.42 |
| EES08028 | Sorghum | cytosol | 87.5 | 46.42 |
| GSMUA_Achr8P02660_001 | Banana | cytosol | 87.5 | 46.42 |
| GSMUA_Achr10P... | Banana | cytosol | 87.5 | 46.42 |
| GSMUA_Achr3P02960_001 | Banana | cytosol | 87.5 | 46.42 |
| KXG21029 | Sorghum | cytosol | 87.0 | 46.15 |
| PGSC0003DMT400060953 | Potato | cytosol | 87.0 | 46.15 |
| KXG23031 | Sorghum | cytosol | 87.0 | 46.15 |
| Zm00001d011086_P005 | Maize | cytosol | 87.0 | 46.15 |
| Zm00001d053177_P004 | Maize | cytosol | 87.0 | 46.15 |
| Zm00001d035720_P002 | Maize | cytosol | 87.0 | 46.15 |
| Os01t0964133-01 | Rice | plasma membrane | 86.5 | 45.89 |
| PGSC0003DMT400060225 | Potato | cytosol | 86.5 | 45.89 |
| GSMUA_Achr11P... | Banana | cytosol | 86.5 | 45.89 |
| PGSC0003DMT400077954 | Potato | cytosol | 86.0 | 45.62 |
| KRH43946 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 85.5 | 45.36 |
| KRH10484 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 85.5 | 45.36 |
| PGSC0003DMT400001169 | Potato | cytosol | 85.5 | 45.24 |
| Zm00001d035722_P007 | Maize | plasma membrane | 87.0 | 45.19 |
| Zm00001d012277_P001 | Maize | cytosol | 84.5 | 44.95 |
| PGSC0003DMT400023026 | Potato | cytosol | 84.5 | 44.83 |
| PGSC0003DMT400049429 | Potato | cytosol | 84.5 | 44.83 |
| Zm00001d042731_P002 | Maize | extracellular, plasma membrane, plastid | 84.0 | 44.68 |
| Os05t0438800-01 | Rice | plasma membrane, plastid | 84.0 | 44.68 |
| Zm00001d034761_P002 | Maize | cytosol | 87.5 | 44.64 |
| TraesCS1D01G274400.1 | Wheat | cytosol | 83.5 | 44.41 |
| TraesCS1B01G283900.1 | Wheat | cytosol | 83.5 | 44.41 |
| Zm00001d010159_P002 | Maize | extracellular, plasma membrane | 83.5 | 44.41 |
| TraesCS1A01G274400.1 | Wheat | golgi | 83.5 | 44.41 |
| EES01810 | Sorghum | cytosol | 83.5 | 44.41 |
| EES19603 | Sorghum | cytosol | 83.5 | 44.41 |
| HORVU1Hr1G074350.1 | Barley | cytosol | 83.5 | 44.41 |
| TraesCS5A01G124300.2 | Wheat | golgi | 88.0 | 43.03 |
| TraesCS1A01G020500.2 | Wheat | cytosol | 87.5 | 43.0 |
| HORVU1Hr1G002840.6 | Barley | plasma membrane | 87.5 | 43.0 |
| GSMUA_Achr9P08850_001 | Banana | cytosol | 74.5 | 42.69 |
| TraesCS5D01G132200.1 | Wheat | golgi | 78.5 | 42.32 |
| GSMUA_Achr10P... | Banana | cytosol | 58.0 | 42.18 |
| GSMUA_Achr11P... | Banana | cytosol | 73.5 | 42.12 |
| GSMUA_Achr5P29190_001 | Banana | cytosol | 73.0 | 41.95 |
| PGSC0003DMT400087294 | Potato | mitochondrion | 54.5 | 39.78 |
| Zm00001d011087_P001 | Maize | plastid | 87.0 | 38.33 |
| GSMUA_Achr2P08030_001 | Banana | cytosol | 67.0 | 38.29 |
| HORVU5Hr1G039850.3 | Barley | mitochondrion | 88.0 | 37.85 |
| KXG21030 | Sorghum | cytosol | 70.5 | 36.25 |
| PGSC0003DMT400022210 | Potato | cytosol | 56.5 | 30.71 |
| Zm00001d004855_P002 | Maize | cytoskeleton, cytosol, nucleus | 86.5 | 29.32 |
| PGSC0003DMT400074882 | Potato | cytosol | 54.0 | 29.19 |
| PGSC0003DMT400022205 | Potato | cytosol | 52.5 | 28.69 |
| PGSC0003DMT400074887 | Potato | cytosol | 53.0 | 28.65 |
| Zm00001d007792_P001 | Maize | cytosol | 31.0 | 23.48 |
| PGSC0003DMT400019210 | Potato | cytosol | 38.0 | 21.11 |
| PGSC0003DMT400056033 | Potato | cytosol | 43.5 | 20.0 |
| PGSC0003DMT400052197 | Potato | cytosol | 34.5 | 17.29 |
| PGSC0003DMT400027956 | Potato | cytosol | 32.5 | 15.08 |
| PGSC0003DMT400038724 | Potato | cytosol | 30.5 | 13.93 |
| Zm00001d004087_P001 | Maize | cytosol | 9.5 | 8.8 |
| Zm00001d003298_P001 | Maize | cytosol | 10.5 | 7.98 |
| Zm00001d034421_P004 | Maize | plastid | 17.0 | 7.26 |
| PGSC0003DMT400088088 | Potato | cytosol | 4.0 | 4.12 |
| Os01t0866100-01 | Rice | plasma membrane | 3.5 | 3.45 |
| Zm00001d016605_P001 | Maize | cytosol | 2.5 | 3.16 |
| PGSC0003DMT400076499 | Potato | cytosol | 1.5 | 1.55 |
| Zm00001d016508_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d019396_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d019635_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400076501 | EnsemblPlantsGene:PGSC0003DMG400029746 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | InterPro:Actin | InterPro:Actin_CS |
| PANTHER:PTHR11937 | PANTHER:PTHR11937:SF358 | PFAM:PF00022 | PGSC:PGSC0003DMG400029746 | ScanProsite:PS00432 | SMART:SM00268 |
| SUPFAM:SSF53067 | UniParc:UPI000294EBE4 | UniProt:M1CWV7 | MapMan:20.2.1 | : | : |
Description
Actin-101 [Source:PGSC_GENE;Acc:PGSC0003DMG400029746]
Coordinates
chr1:-:81535002..81535705
Molecular Weight (calculated)
22341.9 Da
IEP (calculated)
4.922
GRAVY (calculated)
-0.159
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MKILTERGYS FTTSAEREIV RDMKEKLAYV ALDYEQELET ATSSSAVEKS YELPDGQVIT IGAERFRCPE VLFQPSLVGM EAAGIHETTY NSIMKCDVDI
101: RKDLYGNIVL SGGTTMFPGI ADRMSKEITA LAPSSMKIKV VAPPERKYSV WIGGSILASL STFQQLGPLP DFVSLNYWQM WITKGEYDES GPSIVHRKCF
101: RKDLYGNIVL SGGTTMFPGI ADRMSKEITA LAPSSMKIKV VAPPERKYSV WIGGSILASL STFQQLGPLP DFVSLNYWQM WITKGEYDES GPSIVHRKCF
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.