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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 plastid: 22065420
msms PMID: 22065420 doi
W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003298_P001
Zm00001d004087_P001
Zm00001d004855_P002
Zm00001d007792_P001
Zm00001d008517_P001
Zm00001d008746_P001
Zm00001d008768_P001
Zm00001d009747_P001
Zm00001d010159_P002
Zm00001d011086_P005
Zm00001d011087_P001
Zm00001d011131_P001
Zm00001d011132_P001
Zm00001d011202_P002
Zm00001d012277_P001
Zm00001d013141_P001
Zm00001d014053_P001
Zm00001d016508_P001
Zm00001d016605_P001
Zm00001d019396_P001
Zm00001d019635_P001
Zm00001d029295_P001
Zm00001d029656_P003
Zm00001d034024_P001
Zm00001d034326_P001
Zm00001d034421_P004
Zm00001d034761_P002
Zm00001d035720_P002
Zm00001d035722_P007
Zm00001d038078_P001
Zm00001d038846_P001
Zm00001d039163_P002
Zm00001d040038_P001
Zm00001d042097_P001
Zm00001d042731_P002
Zm00001d044301_P001
Zm00001d047714_P001
Zm00001d053177_P004

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G49240.1 Zm00001d009747_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011131_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011132_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011202_P002 AT1G72770.1 19033529
AT1G49240.1 Zm00001d038846_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d039163_P002 AT1G72770.1 19033529
AT1G49240.1 Zm00001d044301_P001 AT1G72770.1 19033529
AT5G09810.1 Zm00001d013141_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d029656_P003 AT2G31200.1 21798944
AT5G09810.1 Zm00001d034024_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d034326_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d008517_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d008768_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d014053_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d029295_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d038078_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d040038_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d042097_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d047714_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d003298_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d004087_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d004855_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d007792_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d008746_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d010159_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d011086_P005 AT5G09810.1 21798944
AT5G09810.1 Zm00001d011087_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d012277_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d016508_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d016605_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d019396_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d019635_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d034421_P004 AT5G09810.1 21798944
AT5G09810.1 Zm00001d034761_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d035720_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d035722_P007 AT5G09810.1 21798944
AT5G09810.1 Zm00001d042731_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d053177_P004 AT5G09810.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d019635_P001 Maize cytosol 26.07 88.41
Zm00001d016605_P001 Maize cytosol 28.42 84.18
Zm00001d016508_P001 Maize cytosol 23.5 79.71
Zm00001d019396_P001 Maize cytosol 25.43 70.83
PGSC0003DMT400076499 Potato cytosol 29.06 70.47
Os01t0866100-01 Rice plasma membrane 27.35 63.05
Zm00001d003298_P001 Maize cytosol 30.13 53.61
Zm00001d004087_P001 Maize cytosol 24.57 53.24
CDX99315 Canola cytosol 33.97 49.23
Bra022356.1-P Field mustard cytosol 33.76 48.92
CDX92271 Canola cytosol 32.91 48.58
PGSC0003DMT400087294 Potato mitochondrion 27.35 46.72
Zm00001d033790_P001 Maize cytosol 37.61 46.68
Zm00001d013410_P001 Maize cytosol 37.61 46.68
Zm00001d035720_P002 Maize cytosol 37.39 46.42
Zm00001d011086_P005 Maize cytosol 37.39 46.42
Zm00001d007792_P001 Maize cytosol 26.07 46.21
KRH43389 Soybean cytosol 37.18 46.15
KRH59535 Soybean cytosol 37.18 46.15
KRH64098 Soybean cytosol 37.18 46.15
Zm00001d053177_P004 Maize cytosol 37.18 46.15
CDY56544 Canola cytosol 37.18 46.15
CDX81140 Canola cytosol 37.18 46.15
Solyc03g078400.2.1 Tomato nucleus, plastid 36.97 45.89
Solyc11g005330.1.1 Tomato nucleus 36.97 45.89
VIT_12s0178g00200.t01 Wine grape cytosol 36.97 45.89
PGSC0003DMT400010174 Potato cytosol 36.97 45.89
AT5G09810.1 Thale cress cytosol 36.97 45.89
Bra028615.1-P Field mustard cytosol 36.97 45.89
PGSC0003DMT400047481 Potato cytosol 36.97 45.89
Bra006033.1-P Field mustard cytosol 36.97 45.89
CDY21607 Canola cytosol 36.75 45.62
Solyc01g104770.2.1 Tomato nucleus 36.75 45.62
CDX69885 Canola cytosol 36.75 45.62
Zm00001d035722_P007 Maize plasma membrane 37.39 45.45
Zm00001d013873_P001 Maize plasma membrane, plastid 36.54 45.36
Zm00001d032480_P002 Maize plasma membrane, plastid 36.54 45.36
Zm00001d012277_P001 Maize cytosol 36.32 45.21
KRH43946 Soybean endoplasmic reticulum, mitochondrion, nucleus 36.11 44.83
KRH10484 Soybean endoplasmic reticulum, mitochondrion, nucleus 36.11 44.83
Bra037560.1-P Field mustard cytoskeleton, cytosol 33.76 44.76
Zm00001d042731_P002 Maize extracellular, plasma membrane, plastid 35.68 44.41
AT3G18780.3 Thale cress cytosol 35.68 44.3
AT1G49240.1 Thale cress cytosol 35.68 44.3
CDX82326 Canola cytosol 35.68 44.3
CDX92272 Canola cytosol 35.68 44.3
CDX95498 Canola cytosol 35.68 44.3
CDY18545 Canola cytosol 35.68 44.3
CDY61982 Canola cytosol 35.68 44.3
Zm00001d034761_P002 Maize cytosol 36.97 44.13
Solyc04g071260.2.1 Tomato plastid 35.26 43.77
Zm00001d010159_P002 Maize extracellular, plasma membrane 35.04 43.62
PGSC0003DMT400088088 Potato cytosol 17.95 43.3
KRH53856 Soybean endoplasmic reticulum, mitochondrion 30.13 42.47
CDX85794 Canola cytosol 31.84 42.21
CDY40061 Canola cytosol 31.84 42.21
CDY31972 Canola cytosol 31.84 42.21
CDY30296 Canola cytosol 31.84 42.21
Bra009081.1-P Field mustard cytosol 31.41 41.64
GSMUA_Achr2P08030_001 Banana cytosol 30.56 40.86
Zm00001d011087_P001 Maize plastid 37.39 38.55
VIT_04s0044g00580.t01 Wine grape extracellular 37.18 37.83
PGSC0003DMT400074882 Potato cytosol 29.06 36.76
PGSC0003DMT400022205 Potato cytosol 28.42 36.34
PGSC0003DMT400022210 Potato cytosol 28.42 36.14
PGSC0003DMT400074887 Potato cytosol 26.71 33.78
Zm00001d004855_P002 Maize cytoskeleton, cytosol, nucleus 37.39 29.66
Zm00001d022558_P001 Maize cytosol 19.23 23.14
Zm00001d008652_P001 Maize endoplasmic reticulum, plastid 11.32 22.94
Zm00001d008746_P001 Maize cytosol 12.39 21.09
Zm00001d017106_P001 Maize cytosol 17.52 18.94
Zm00001d050981_P001 Maize cytosol 16.88 17.21
PGSC0003DMT400076501 Potato cytosol 7.26 17.0
Zm00001d027326_P001 Maize cytosol, extracellular, nucleus 15.81 16.7
Zm00001d014112_P003 Maize cytosol 13.68 15.5
Zm00001d024059_P002 Maize cytosol 13.89 15.12
Zm00001d049629_P002 Maize nucleus 11.11 14.13
Protein Annotations
KEGG:00230+2.7.4.3KEGG:00730+2.7.4.3Gene3D:2.30.36.70Gene3D:3.30.200.20MapMan:35.1UniProt:A0A1R3MNR4
UniProt:A0A1X8LRQ5InterPro:ActinInterPro:Actin/actin-like_CSInterPro:Actin_CSInterPro:Adenylat_kinase_CSGO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524InterPro:Kinase-like_dom_sfProteinID:ONM10218.1PFAM:PF00022
PRINTS:PR00190ScanProsite:PS00113ScanProsite:PS00406ScanProsite:PS01132PANTHER:PTHR11937PANTHER:PTHR11937:SF355
SMART:SM00268SUPFAM:SSF53067SUPFAM:SSF56112UniParc:UPI000844F834EnsemblPlantsGene:Zm00001d034421EnsemblPlants:Zm00001d034421_P004
EnsemblPlants:Zm00001d034421_T004SEG:seg::::
Description
Actin-7
Coordinates
chr1:-:292486760..292492680
Molecular Weight (calculated)
53129.7 Da
IEP (calculated)
8.800
GRAVY (calculated)
-0.369
Length
468 amino acids
Sequence
(BLAST)
001: MDHVVGGKFK LGKKIRSGSF GKLYLAVNVQ NGEEVAVKLE SVTSRHPQLH YESKLYMLLQ GGSWRILYLP NCSKIYQLPH LIFFWDRFPL DQGCRREALA
101: TGCCTSTANR GHRAGGQKQP ATTVGHRRLE EGEEKGELGF ILDGFPRTMR QAVENGRCRG YPAPRLRQRN WHGQGEPPAG FAGDDAPRAV FPSIVGRPRH
201: TGVMVGMGQK DAYVGDEAQS KRGILTLKYP IEHGIVSNWD DMEKIWHHTF YNELRVAPEE HPVLLTEAPL NPKANREKMT QIMFETFNTP AMYVAIQTVL
301: SLYASGRTTD FRDYLYRNFR YSVEKTEGLG WEYSTDGKCE KMPSTNMLNV HIQSLPCFEQ EGMIDDASLW DTTTICSNVC TRYTITAGTN ATGFTPIQFL
401: SYAVTKRTVQ TPQIRISWLL TCRIFPDSKS SWSHLPRFKI AQLSFPILYF FLESFPILYS VCSNTIFA
Best Arabidopsis Sequence Match ( AT3G12110.1 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTSAEREI VRDVKEKLAY IALDYEQEME TANTSSSVEK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT11Actin-11 [Source:UniProtKB/Swiss-Prot;Acc:P53496]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.