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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003298_P001
Zm00001d004087_P001
Zm00001d004855_P002
Zm00001d007792_P001
Zm00001d008517_P001
Zm00001d008746_P001
Zm00001d008768_P001
Zm00001d009747_P001
Zm00001d010159_P002
Zm00001d011086_P005
Zm00001d011087_P001
Zm00001d011131_P001
Zm00001d011132_P001
Zm00001d011202_P002
Zm00001d012277_P001
Zm00001d013141_P001
Zm00001d014053_P001
Zm00001d016508_P001
Zm00001d016605_P001
Zm00001d019396_P001
Zm00001d019635_P001
Zm00001d029295_P001
Zm00001d029656_P003
Zm00001d034024_P001
Zm00001d034326_P001
Zm00001d034421_P004
Zm00001d034761_P002
Zm00001d035720_P002
Zm00001d035722_P007
Zm00001d038078_P001
Zm00001d038846_P001
Zm00001d039163_P002
Zm00001d040038_P001
Zm00001d042097_P001
Zm00001d042731_P002
Zm00001d044301_P001
Zm00001d047714_P001
Zm00001d053177_P004

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G49240.1 Zm00001d009747_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011131_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011132_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011202_P002 AT1G72770.1 19033529
AT1G49240.1 Zm00001d038846_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d039163_P002 AT1G72770.1 19033529
AT1G49240.1 Zm00001d044301_P001 AT1G72770.1 19033529
AT5G09810.1 Zm00001d013141_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d029656_P003 AT2G31200.1 21798944
AT5G09810.1 Zm00001d034024_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d034326_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d008517_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d008768_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d014053_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d029295_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d038078_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d040038_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d042097_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d047714_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d003298_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d004087_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d004855_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d007792_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d008746_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d010159_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d011086_P005 AT5G09810.1 21798944
AT5G09810.1 Zm00001d011087_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d012277_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d016508_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d016605_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d019396_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d019635_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d034421_P004 AT5G09810.1 21798944
AT5G09810.1 Zm00001d034761_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d035720_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d035722_P007 AT5G09810.1 21798944
AT5G09810.1 Zm00001d042731_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d053177_P004 AT5G09810.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400076499 Potato cytosol 61.11 68.39
Zm00001d003298_P001 Maize cytosol 77.78 63.88
Zm00001d019635_P001 Maize cytosol 40.74 63.77
Zm00001d016605_P001 Maize cytosol 43.98 60.13
Zm00001d019396_P001 Maize cytosol 44.91 57.74
Zm00001d016508_P001 Maize cytosol 35.19 55.07
Zm00001d007792_P001 Maize cytosol 64.81 53.03
Os01t0866100-01 Rice plasma membrane 45.83 48.77
KRH53856 Soybean endoplasmic reticulum, mitochondrion 72.22 46.99
CDX92271 Canola cytosol 67.59 46.06
PGSC0003DMT400088088 Potato cytosol 38.43 42.78
VIT_12s0178g00200.t01 Wine grape cytosol 72.69 41.64
Zm00001d033790_P001 Maize cytosol 72.69 41.64
Zm00001d013410_P001 Maize cytosol 72.69 41.64
KRH43389 Soybean cytosol 72.22 41.38
KRH43946 Soybean endoplasmic reticulum, mitochondrion, nucleus 72.22 41.38
CDY56544 Canola cytosol 72.22 41.38
KRH59535 Soybean cytosol 72.22 41.38
KRH64098 Soybean cytosol 72.22 41.38
PGSC0003DMT400010174 Potato cytosol 72.22 41.38
Zm00001d011086_P005 Maize cytosol 72.22 41.38
PGSC0003DMT400047481 Potato cytosol 72.22 41.38
Solyc11g005330.1.1 Tomato nucleus 72.22 41.38
Solyc01g104770.2.1 Tomato nucleus 72.22 41.38
Solyc03g078400.2.1 Tomato nucleus, plastid 72.22 41.38
CDX81140 Canola cytosol 72.22 41.38
Zm00001d053177_P004 Maize cytosol 72.22 41.38
AT5G09810.1 Thale cress cytosol 72.22 41.38
KRH10484 Soybean endoplasmic reticulum, mitochondrion, nucleus 72.22 41.38
Zm00001d035720_P002 Maize cytosol 72.22 41.38
Zm00001d032480_P002 Maize plasma membrane, plastid 71.76 41.11
CDY21607 Canola cytosol 71.76 41.11
CDX69885 Canola cytosol 71.76 41.11
Bra028615.1-P Field mustard cytosol 71.76 41.11
Bra006033.1-P Field mustard cytosol 71.76 41.11
Zm00001d013873_P001 Maize plasma membrane, plastid 71.76 41.11
Zm00001d012277_P001 Maize cytosol 71.3 40.96
CDX99315 Canola cytosol 61.11 40.87
Bra022356.1-P Field mustard cytosol 61.11 40.87
Bra037560.1-P Field mustard cytoskeleton, cytosol 66.67 40.79
Zm00001d035722_P007 Maize plasma membrane 72.22 40.52
Zm00001d042731_P002 Maize extracellular, plasma membrane, plastid 69.91 40.16
AT3G18780.3 Thale cress cytosol 69.91 40.05
AT1G49240.1 Thale cress cytosol 69.91 40.05
CDX82326 Canola cytosol 69.91 40.05
CDX92272 Canola cytosol 69.91 40.05
CDX95498 Canola cytosol 69.91 40.05
CDY18545 Canola cytosol 69.91 40.05
CDY61982 Canola cytosol 69.91 40.05
Zm00001d010159_P002 Maize extracellular, plasma membrane 68.98 39.63
Zm00001d034761_P002 Maize cytosol 71.3 39.29
Solyc04g071260.2.1 Tomato plastid 68.52 39.26
GSMUA_Achr2P08030_001 Banana cytosol 62.96 38.86
CDY31972 Canola cytosol 61.11 37.39
CDX85794 Canola cytosol 61.11 37.39
CDY30296 Canola cytosol 61.11 37.39
CDY40061 Canola cytosol 61.11 37.39
Bra009081.1-P Field mustard cytosol 60.19 36.83
Zm00001d011087_P001 Maize plastid 72.22 34.36
PGSC0003DMT400022205 Potato cytosol 57.87 34.15
VIT_04s0044g00580.t01 Wine grape extracellular 72.22 33.91
PGSC0003DMT400074882 Potato cytosol 57.41 33.51
PGSC0003DMT400087294 Potato mitochondrion 41.2 32.48
PGSC0003DMT400022210 Potato cytosol 55.09 32.34
PGSC0003DMT400074887 Potato cytosol 54.63 31.89
Zm00001d004855_P002 Maize cytoskeleton, cytosol, nucleus 71.3 26.1
Zm00001d034421_P004 Maize plastid 53.24 24.57
Zm00001d022558_P001 Maize cytosol 37.96 21.08
Zm00001d008652_P001 Maize endoplasmic reticulum, plastid 20.83 19.48
Zm00001d008746_P001 Maize cytosol 24.07 18.91
Zm00001d017106_P001 Maize cytosol 34.26 17.09
Zm00001d049629_P002 Maize nucleus 27.78 16.3
Zm00001d050981_P001 Maize cytosol 34.26 16.12
Zm00001d014112_P003 Maize cytosol 26.39 13.8
Zm00001d027326_P001 Maize cytosol, extracellular, nucleus 27.31 13.32
Zm00001d024059_P002 Maize cytosol 26.39 13.26
PGSC0003DMT400076501 Potato cytosol 8.8 9.5
Protein Annotations
EnsemblPlants:Zm00001d004087_P001EnsemblPlants:Zm00001d004087_T001EnsemblPlantsGene:Zm00001d004087Gene3D:3.30.420.40InterPro:ActinInterPro:Actin_CS
PANTHER:PTHR11937PANTHER:PTHR11937:SF355PFAM:PF00022PRINTS:PR00190ProteinID:ONM18296.1ScanProsite:PS00406
SEG:segSMART:SM00268SUPFAM:SSF53067UniParc:UPI0008425C73UniProt:A0A1D6EDC9MapMan:35.1
Description
Actin-7
Coordinates
chr2:+:81421075..81421813
Molecular Weight (calculated)
24380.5 Da
IEP (calculated)
5.772
GRAVY (calculated)
0.073
Length
216 amino acids
Sequence
(BLAST)
001: MVGMGQKDAY VGDEAQSKRG ILTLKYPIEH GIASNWDDME KIWHHTFYNE LRVAPEEHPV LLTEAPLNPK AKREKMTQIM FETFNTPAMY VAIQVVLSLY
101: ASGRTTGIVL DSGDGVSHTV PIYEGYTLPH AILHLDLAGR DLTDCSFALD CVCSKDIIQN LTERFYLLHN YCIALFVEYY LLGDGLLLLL AGLRTDGLQS
201: IVGAWYQRVH LFTILR
Best Arabidopsis Sequence Match ( AT3G12110.1 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTSAEREI VRDVKEKLAY IALDYEQEME TANTSSSVEK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT11Actin-11 [Source:UniProtKB/Swiss-Prot;Acc:P53496]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.