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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
 extracellular: 20408568
plasma membrane: 27341663
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003298_P001
Zm00001d004087_P001
Zm00001d004855_P002
Zm00001d007792_P001
Zm00001d008517_P001
Zm00001d008746_P001
Zm00001d008768_P001
Zm00001d009747_P001
Zm00001d010159_P002
Zm00001d011086_P005
Zm00001d011087_P001
Zm00001d011131_P001
Zm00001d011132_P001
Zm00001d011202_P002
Zm00001d012277_P001
Zm00001d013141_P001
Zm00001d014053_P001
Zm00001d016508_P001
Zm00001d016605_P001
Zm00001d019396_P001
Zm00001d019635_P001
Zm00001d029295_P001
Zm00001d029656_P003
Zm00001d034024_P001
Zm00001d034326_P001
Zm00001d034421_P004
Zm00001d034761_P002
Zm00001d035720_P002
Zm00001d035722_P007
Zm00001d038078_P001
Zm00001d038846_P001
Zm00001d039163_P002
Zm00001d040038_P001
Zm00001d042097_P001
Zm00001d042731_P002
Zm00001d044301_P001
Zm00001d047714_P001
Zm00001d053177_P004

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G49240.1 Zm00001d009747_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011131_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011132_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011202_P002 AT1G72770.1 19033529
AT1G49240.1 Zm00001d038846_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d039163_P002 AT1G72770.1 19033529
AT1G49240.1 Zm00001d044301_P001 AT1G72770.1 19033529
AT5G09810.1 Zm00001d013141_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d029656_P003 AT2G31200.1 21798944
AT5G09810.1 Zm00001d034024_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d034326_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d008517_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d008768_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d014053_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d029295_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d038078_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d040038_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d042097_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d047714_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d003298_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d004087_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d004855_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d007792_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d008746_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d010159_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d011086_P005 AT5G09810.1 21798944
AT5G09810.1 Zm00001d011087_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d012277_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d016508_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d016605_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d019396_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d019635_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d034421_P004 AT5G09810.1 21798944
AT5G09810.1 Zm00001d034761_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d035720_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d035722_P007 AT5G09810.1 21798944
AT5G09810.1 Zm00001d042731_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d053177_P004 AT5G09810.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES19603 Sorghum cytosol 99.2 99.2
Os05t0438800-01 Rice plasma membrane, plastid 98.4 98.4
TraesCS1B01G283900.1 Wheat cytosol 96.81 96.81
HORVU1Hr1G074350.1 Barley cytosol 96.81 96.81
TraesCS1A01G274400.1 Wheat golgi 96.81 96.81
TraesCS1D01G274400.1 Wheat cytosol 96.81 96.81
Zm00001d012277_P001 Maize cytosol 93.35 93.35
Zm00001d042731_P002 Maize extracellular, plasma membrane, plastid 92.82 92.82
CDX85794 Canola cytosol 86.7 92.35
CDY40061 Canola cytosol 86.7 92.35
KRH43389 Soybean cytosol 92.55 92.31
Bra028615.1-P Field mustard cytosol 92.55 92.31
Solyc01g104770.2.1 Tomato nucleus 92.55 92.31
KRH59535 Soybean cytosol 92.55 92.31
PGSC0003DMT400076499 Potato cytosol 47.34 92.23
CDY21607 Canola cytosol 92.29 92.04
Zm00001d035720_P002 Maize cytosol 92.29 92.04
Zm00001d011086_P005 Maize cytosol 92.29 92.04
VIT_12s0178g00200.t01 Wine grape cytosol 92.29 92.04
CDX69885 Canola cytosol 92.29 92.04
AT5G09810.1 Thale cress cytosol 92.29 92.04
CDY30296 Canola cytosol 86.17 91.78
CDY31972 Canola cytosol 86.17 91.78
Zm00001d013873_P001 Maize plasma membrane, plastid 92.02 91.78
KRH64098 Soybean cytosol 92.02 91.78
Zm00001d032480_P002 Maize plasma membrane, plastid 92.02 91.78
GSMUA_Achr9P03170_001 Banana cytosol 91.76 91.76
GSMUA_Achr5P29190_001 Banana cytosol 84.84 91.67
GSMUA_Achr6P25350_001 Banana cytosol 91.76 91.51
PGSC0003DMT400047481 Potato cytosol 91.76 91.51
Solyc03g078400.2.1 Tomato nucleus, plastid 91.76 91.51
CDY56544 Canola cytosol 91.76 91.51
GSMUA_Achr10P... Banana cytosol 91.76 91.51
CDX81140 Canola cytosol 91.76 91.51
Zm00001d053177_P004 Maize cytosol 91.76 91.51
Bra009081.1-P Field mustard cytosol 85.9 91.5
Zm00001d019635_P001 Maize cytosol 33.51 91.3
KRH53856 Soybean endoplasmic reticulum, mitochondrion 80.59 91.27
Solyc11g005330.1.1 Tomato nucleus 91.49 91.25
PGSC0003DMT400010174 Potato cytosol 91.49 91.25
GSMUA_Achr2P16160_001 Banana cytosol 91.49 91.25
Bra006033.1-P Field mustard cytosol 91.49 91.25
GSMUA_Achr9P08850_001 Banana cytosol 84.57 91.12
GSMUA_Achr3P02960_001 Banana cytosol 91.22 90.98
GSMUA_Achr8P16150_001 Banana cytosol 91.22 90.98
GSMUA_Achr8P02660_001 Banana cytosol 91.22 90.98
GSMUA_Achr7P10410_001 Banana cytosol 90.96 90.72
GSMUA_Achr6P34320_001 Banana cytosol 58.78 90.57
GSMUA_Achr11P... Banana cytosol 83.78 90.26
Zm00001d033790_P001 Maize cytosol 90.43 90.19
Zm00001d013410_P001 Maize cytosol 90.43 90.19
Zm00001d035722_P007 Maize plasma membrane 92.29 90.13
KRH43946 Soybean endoplasmic reticulum, mitochondrion, nucleus 90.16 89.92
KRH10484 Soybean endoplasmic reticulum, mitochondrion, nucleus 90.16 89.92
GSMUA_Achr11P... Banana cytosol 89.63 89.39
Zm00001d034761_P002 Maize cytosol 92.02 88.27
Zm00001d016605_P001 Maize cytosol 36.97 87.97
CDX82326 Canola cytosol 87.77 87.53
AT1G49240.1 Thale cress cytosol 87.77 87.53
CDX99315 Canola cytosol 75.0 87.31
Bra022356.1-P Field mustard cytosol 75.0 87.31
AT3G18780.3 Thale cress cytosol 87.5 87.27
CDX92272 Canola cytosol 87.5 87.27
CDX95498 Canola cytosol 87.5 87.27
CDY18545 Canola cytosol 87.5 87.27
CDY61982 Canola cytosol 87.5 87.27
Solyc04g071260.2.1 Tomato plastid 87.23 87.0
CDX92271 Canola cytosol 72.87 86.44
Zm00001d008746_P001 Maize cytosol 61.97 84.73
PGSC0003DMT400076501 Potato cytosol 44.41 83.5
Zm00001d016508_P001 Maize cytosol 30.59 83.33
GSMUA_Achr10P... Banana cytosol 60.11 82.18
Zm00001d007792_P001 Maize cytosol 56.38 80.3
Bra037560.1-P Field mustard cytoskeleton, cytosol 75.0 79.89
Zm00001d019396_P001 Maize cytosol 35.37 79.17
Zm00001d011087_P001 Maize plastid 92.29 76.43
VIT_04s0044g00580.t01 Wine grape extracellular 92.02 75.22
PGSC0003DMT400087294 Potato mitochondrion 54.26 74.45
Zm00001d003298_P001 Maize cytosol 50.8 72.62
Zm00001d004087_P001 Maize cytosol 39.63 68.98
PGSC0003DMT400022210 Potato cytosol 65.69 67.12
PGSC0003DMT400022205 Potato cytosol 64.63 66.39
PGSC0003DMT400074882 Potato cytosol 65.16 66.22
PGSC0003DMT400074887 Potato cytosol 61.97 62.97
PGSC0003DMT400088088 Potato cytosol 31.65 61.34
Zm00001d004855_P002 Maize cytoskeleton, cytosol, nucleus 92.02 58.64
Zm00001d022558_P001 Maize cytosol 44.95 43.44
Zm00001d034421_P004 Maize plastid 43.62 35.04
Zm00001d027326_P001 Maize cytosol, extracellular, nucleus 40.69 34.54
Zm00001d017106_P001 Maize cytosol 38.03 33.03
Zm00001d049629_P002 Maize nucleus 30.85 31.52
Zm00001d050981_P001 Maize cytosol 37.5 30.72
Zm00001d014112_P003 Maize cytosol 32.71 29.78
Zm00001d024059_P002 Maize cytosol 34.04 29.77
Zm00001d008652_P001 Maize endoplasmic reticulum, plastid 17.02 27.71
Protein Annotations
EntrezGene:100282267MapMan:20.2.1Gene3D:3.30.420.40Gene3D:3.90.640.10ProteinID:AQK93546.1ProteinID:AQK93547.1
ProteinID:AQK93548.1InterPro:ActinInterPro:Actin/actin-like_CSInterPro:Actin_CSUniProt:B4FPG2EMBL:BT039000
GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005524PFAM:PF00022PRINTS:PR00190
ScanProsite:PS00406ScanProsite:PS00432ScanProsite:PS01132PANTHER:PTHR11937PANTHER:PTHR11937:SF248SMART:SM00268
SUPFAM:SSF53067UniParc:UPI00017B7F45EnsemblPlantsGene:Zm00001d010159EnsemblPlants:Zm00001d010159_P002EnsemblPlants:Zm00001d010159_T002:
Description
actin1Actin-1
Coordinates
chr8:-:102413407..102417536
Molecular Weight (calculated)
41643.0 Da
IEP (calculated)
5.053
GRAVY (calculated)
-0.208
Length
376 amino acids
Sequence
(BLAST)
001: MADEDIQPIV CDNGTGMVKA GFAGDDAPRA VFPSIVGRPR HTGVMVGMGQ KDAYVGDEAQ AKRGILTLKY PIEHGIVNNW DDMEKIWHHT FYNELRVSPE
101: DHPVLLTEAP LNPKANREKM TQIMFETFEC PAMYVAIQAV LSLYASGRTT GIVMDSGDGV SHTVPIYEGY TLPHAILRLD LAGRDLTDHL MKILTERGYS
201: LTTSAEREIV RDIKEKLAYV ALDYEQELET ARSSSSVEKS YEMPDGQVIT IGSERFRCPE VLFQPSLVGM ESPGVHEATY NSIMKCDVDI RKDLYGNVVL
301: SGGSTMFPGI ADRMSKEITS LAPSSMKVKV IAPPERKYSV WIGGSILASL STFQQMWISK GEYDETGPGI VHMKCF
Best Arabidopsis Sequence Match ( AT2G37620.2 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.