Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016508_P001 | Maize | cytosol | 81.16 | 81.16 |
| Zm00001d016605_P001 | Maize | cytosol | 92.75 | 81.01 |
| PGSC0003DMT400076499 | Potato | cytosol | 94.93 | 67.88 |
| Zm00001d019396_P001 | Maize | cytosol | 81.16 | 66.67 |
| Os01t0866100-01 | Rice | plasma membrane | 92.75 | 63.05 |
| Zm00001d003298_P001 | Maize | cytosol | 97.83 | 51.33 |
| Zm00001d004087_P001 | Maize | cytosol | 63.77 | 40.74 |
| CDX92271 | Canola | cytosol | 90.58 | 39.43 |
| CDX99315 | Canola | cytosol | 90.58 | 38.7 |
| Bra022356.1-P | Field mustard | cytosol | 89.86 | 38.39 |
| PGSC0003DMT400088088 | Potato | cytosol | 52.9 | 37.63 |
| Zm00001d007792_P001 | Maize | cytosol | 68.84 | 35.98 |
| PGSC0003DMT400087294 | Potato | mitochondrion | 71.01 | 35.77 |
| Zm00001d013410_P001 | Maize | cytosol | 97.1 | 35.54 |
| Zm00001d033790_P001 | Maize | cytosol | 97.1 | 35.54 |
| Bra037560.1-P | Field mustard | cytoskeleton, cytosol | 90.58 | 35.41 |
| KRH59535 | Soybean | cytosol | 96.38 | 35.28 |
| KRH64098 | Soybean | cytosol | 96.38 | 35.28 |
| KRH43389 | Soybean | cytosol | 96.38 | 35.28 |
| VIT_12s0178g00200.t01 | Wine grape | cytosol | 96.38 | 35.28 |
| PGSC0003DMT400010174 | Potato | cytosol | 95.65 | 35.01 |
| Zm00001d011086_P005 | Maize | cytosol | 95.65 | 35.01 |
| PGSC0003DMT400047481 | Potato | cytosol | 95.65 | 35.01 |
| Solyc03g078400.2.1 | Tomato | nucleus, plastid | 95.65 | 35.01 |
| Solyc11g005330.1.1 | Tomato | nucleus | 95.65 | 35.01 |
| Zm00001d013873_P001 | Maize | plasma membrane, plastid | 95.65 | 35.01 |
| AT5G09810.1 | Thale cress | cytosol | 95.65 | 35.01 |
| CDY21607 | Canola | cytosol | 95.65 | 35.01 |
| Zm00001d035720_P002 | Maize | cytosol | 95.65 | 35.01 |
| Zm00001d053177_P004 | Maize | cytosol | 95.65 | 35.01 |
| CDX69885 | Canola | cytosol | 95.65 | 35.01 |
| Bra028615.1-P | Field mustard | cytosol | 95.65 | 35.01 |
| KRH10484 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 94.93 | 34.75 |
| Zm00001d032480_P002 | Maize | plasma membrane, plastid | 94.93 | 34.75 |
| Bra006033.1-P | Field mustard | cytosol | 94.93 | 34.75 |
| KRH43946 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 94.93 | 34.75 |
| Solyc01g104770.2.1 | Tomato | nucleus | 94.93 | 34.75 |
| Zm00001d012277_P001 | Maize | cytosol | 94.2 | 34.57 |
| CDY56544 | Canola | cytosol | 94.2 | 34.48 |
| CDX81140 | Canola | cytosol | 94.2 | 34.48 |
| Zm00001d035722_P007 | Maize | plasma membrane | 95.65 | 34.29 |
| Zm00001d042731_P002 | Maize | extracellular, plasma membrane, plastid | 92.75 | 34.04 |
| Zm00001d010159_P002 | Maize | extracellular, plasma membrane | 91.3 | 33.51 |
| Solyc04g071260.2.1 | Tomato | plastid | 91.3 | 33.42 |
| AT1G49240.1 | Thale cress | cytosol | 91.3 | 33.42 |
| Zm00001d034761_P002 | Maize | cytosol | 94.93 | 33.42 |
| AT3G18780.3 | Thale cress | cytosol | 90.58 | 33.16 |
| CDY18545 | Canola | cytosol | 90.58 | 33.16 |
| CDX95498 | Canola | cytosol | 90.58 | 33.16 |
| CDX92272 | Canola | cytosol | 90.58 | 33.16 |
| CDX82326 | Canola | cytosol | 90.58 | 33.16 |
| CDY61982 | Canola | cytosol | 89.86 | 32.89 |
| CDY30296 | Canola | cytosol | 78.26 | 30.59 |
| CDY31972 | Canola | cytosol | 78.26 | 30.59 |
| CDY40061 | Canola | cytosol | 78.26 | 30.59 |
| CDX85794 | Canola | cytosol | 78.26 | 30.59 |
| GSMUA_Achr2P08030_001 | Banana | cytosol | 77.54 | 30.57 |
| Bra009081.1-P | Field mustard | cytosol | 77.54 | 30.31 |
| PGSC0003DMT400022210 | Potato | cytosol | 78.99 | 29.62 |
| PGSC0003DMT400022205 | Potato | cytosol | 78.26 | 29.51 |
| Zm00001d011087_P001 | Maize | plastid | 95.65 | 29.07 |
| PGSC0003DMT400074882 | Potato | cytosol | 77.54 | 28.92 |
| VIT_04s0044g00580.t01 | Wine grape | extracellular | 95.65 | 28.7 |
| KRH53856 | Soybean | endoplasmic reticulum, mitochondrion | 64.49 | 26.81 |
| PGSC0003DMT400074887 | Potato | cytosol | 71.01 | 26.49 |
| Zm00001d034421_P004 | Maize | plastid | 88.41 | 26.07 |
| Zm00001d004855_P002 | Maize | cytoskeleton, cytosol, nucleus | 94.93 | 22.2 |
| Zm00001d008652_P001 | Maize | endoplasmic reticulum, plastid | 32.61 | 19.48 |
| Zm00001d022558_P001 | Maize | cytosol | 46.38 | 16.45 |
| Zm00001d017106_P001 | Maize | cytosol | 42.75 | 13.63 |
| Zm00001d050981_P001 | Maize | cytosol | 41.3 | 12.42 |
| Zm00001d027326_P001 | Maize | cytosol, extracellular, nucleus | 34.78 | 10.84 |
| Zm00001d008746_P001 | Maize | cytosol | 21.01 | 10.55 |
| Zm00001d024059_P002 | Maize | cytosol | 31.88 | 10.23 |
| Zm00001d014112_P003 | Maize | cytosol | 25.36 | 8.47 |
| Zm00001d049629_P002 | Maize | nucleus | 21.74 | 8.15 |
| PGSC0003DMT400076501 | Potato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d019635_P001 | EnsemblPlants:Zm00001d019635_T001 | EnsemblPlantsGene:Zm00001d019635 | Gene3D:2.30.36.70 | InterPro:Actin | InterPro:Actin_CS |
| PANTHER:PTHR11937 | PANTHER:PTHR11937:SF355 | PFAM:PF00022 | PRINTS:PR00190 | ProteinID:ONM53445.1 | ScanProsite:PS00406 |
| SMART:SM00268 | SUPFAM:SSF53067 | UniParc:UPI00022182B6 | UniProt:A0A1D6HZE0 | MapMan:35.1 | : |
Description
Actin-7
Coordinates
chr7:+:47376220..47379143
Molecular Weight (calculated)
15470.6 Da
IEP (calculated)
5.569
GRAVY (calculated)
-0.320
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MADAEDIQPL VCDNRTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEV PLNPKANKEK MTQIMFETFN TPAMYVAI
101: EEHPILLTEV PLNPKANKEK MTQIMFETFN TPAMYVAI
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTSAEREI VRDVKEKLAY IALDYEQEME TANTSSSVEK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTSAEREI VRDVKEKLAY IALDYEQEME TANTSSSVEK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT11Actin-11 [Source:UniProtKB/Swiss-Prot;Acc:P53496]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.