Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
cytosol:
29344831
nucleus: 29344831 |
gfp PMID:
29344831
doi
Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China., Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China. aumdyms@sicau.edu.cn., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China. zhaoyang@sibs.ac.cn.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0537400-00 | Rice | cytosol | 73.4 | 69.93 |
| Zm00001d038846_P001 | Maize | cytosol, nucleus | 83.69 | 63.78 |
| HORVU3Hr1G067360.1 | Barley | cytosol, peroxisome | 11.35 | 62.75 |
| TraesCS7A01G047900.1 | Wheat | cytosol, mitochondrion, peroxisome | 13.48 | 34.23 |
| Zm00001d009747_P001 | Maize | cytosol | 47.52 | 31.68 |
| Zm00001d039163_P002 | Maize | cytosol | 47.87 | 31.47 |
| Zm00001d011202_P002 | Maize | cytosol, peroxisome, plastid | 47.52 | 30.59 |
| Bra016595.1-P | Field mustard | cytosol | 43.26 | 29.76 |
| CDX83901 | Canola | cytosol | 36.52 | 29.43 |
| CDX96761 | Canola | cytosol | 36.52 | 29.43 |
| Zm00001d044301_P001 | Maize | cytosol, nucleus | 48.58 | 28.31 |
| Zm00001d005609_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 34.4 | 27.71 |
| Zm00001d009626_P001 | Maize | nucleus | 35.11 | 26.4 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 43.97 | 26.11 |
| Zm00001d020100_P001 | Maize | mitochondrion, nucleus, peroxisome, plastid | 32.98 | 25.98 |
| Zm00001d011495_P001 | Maize | cytosol | 35.82 | 25.63 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 43.97 | 25.62 |
| Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 43.97 | 25.62 |
| Solyc08g062650.2.1 | Tomato | extracellular | 42.55 | 25.59 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 45.39 | 25.2 |
| Zm00001d044015_P001 | Maize | cytosol | 35.46 | 24.39 |
| AT1G72770.1 | Thale cress | cytosol | 43.97 | 24.27 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 46.1 | 24.25 |
| CDY26234 | Canola | cytosol | 41.84 | 23.79 |
| Bra025964.1-P | Field mustard | cytosol | 42.55 | 23.62 |
| PGSC0003DMT400006608 | Potato | plastid | 45.39 | 23.49 |
| AT1G17550.1 | Thale cress | cytosol | 42.55 | 23.48 |
| VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 45.39 | 23.36 |
| CDY48313 | Canola | cytosol | 41.49 | 23.35 |
| VIT_04s0008g01420.t01 | Wine grape | cytosol | 45.04 | 23.05 |
| Zm00001d042886_P001 | Maize | nucleus | 33.33 | 23.04 |
| Zm00001d028574_P001 | Maize | nucleus | 32.27 | 22.98 |
| KRH61549 | Soybean | cytosol | 43.62 | 22.61 |
| Zm00001d012401_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 32.98 | 22.52 |
| KRH52222 | Soybean | cytosol | 43.26 | 22.43 |
| KRH05300 | Soybean | cytosol | 43.62 | 22.04 |
| KRH15739 | Soybean | cytosol | 42.55 | 21.54 |
| Zm00001d025055_P001 | Maize | cytosol | 33.33 | 20.26 |
| Zm00001d004357_P001 | Maize | nucleus | 32.62 | 16.91 |
| Zm00001d007529_P001 | Maize | nucleus | 18.79 | 10.39 |
| Zm00001d007528_P001 | Maize | extracellular, vacuole | 9.22 | 10.24 |
| Solyc08g062640.2.1 | Tomato | cytosol | 3.55 | 7.46 |
| Zm00001d011132_P001 | Maize | cytosol, nucleus | 3.55 | 6.71 |
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 1.06 | 3.33 |
| Zm00001d007558_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d007554_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d007533_P001 | Maize | extracellular | 0.0 | 0.0 |
| Zm00001d007532_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d007530_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | Gene3D:3.60.40.10 | MapMan:35.1 | ProteinID:AQK95817.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 |
| GO:GO:0046872 | InterPro:IPR001932 | InterPro:IPR036457 | UniProt:K7VYJ4 | EMBL:KJ855130 | PFAM:PF00481 |
| InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 |
| PANTHER:PTHR13832 | PANTHER:PTHR13832:SF517 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI0002212783 | EnsemblPlantsGene:Zm00001d011131 |
| EnsemblPlants:Zm00001d011131_P001 | EnsemblPlants:Zm00001d011131_T001 | SEG:seg | : | : | : |
Description
Protein phosphatase 2C 16
Coordinates
chr8:+:139985928..139987215
Molecular Weight (calculated)
30204.0 Da
IEP (calculated)
5.224
GRAVY (calculated)
-0.056
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAICVED EAACAAAECA GIGNLDLAAA GAGAGGKRSV YLMDCAPVWG CASTRGRSTE MEDACAAAPR FADVPVRLLA SRRDLDRLGL DADTLRLPAH
101: LFGVFDGHGG AEVASYCRER LQVLLRQELR LLSKDLGETS EADMKEHWDE LFTRCFQRLD DEVSGQASRL VGGVQETRPV AAENVGSTAV VAVVCSSHVV
201: VANCGDSRVV LCRGKEPLEL SIDHKPDRKD ERARIEALGG KVIQWNGYRV SGILAMSRSI GMYIASGTKS WQNDLFPFLS GM
101: LFGVFDGHGG AEVASYCRER LQVLLRQELR LLSKDLGETS EADMKEHWDE LFTRCFQRLD DEVSGQASRL VGGVQETRPV AAENVGSTAV VAVVCSSHVV
201: VANCGDSRVV LCRGKEPLEL SIDHKPDRKD ERARIEALGG KVIQWNGYRV SGILAMSRSI GMYIASGTKS WQNDLFPFLS GM
001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GKHCFF
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GKHCFF
Arabidopsis Description
HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.