Factsheet for Zm00001d053396_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

cytosol: 29344831
nucleus: 29344831

gfp PMID: 29344831 doi

YG Wang, FL Fu, HQ Yu, T Hu, YY Zhang, Y Tao, JK Zhu, Y Zhao, WC Li

Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China., Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China. aumdyms@sicau.edu.cn., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China. zhaoyang@sibs.ac.cn.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d009747_P001
Zm00001d011131_P001
Zm00001d011132_P001
Zm00001d011202_P002
Zm00001d038846_P001
Zm00001d039163_P002
Zm00001d044301_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01360.1	Zm00001d009747_P001	AT1G72770.1	19407142
AT1G01360.1	Zm00001d011131_P001	AT1G72770.1	19407142
AT1G01360.1	Zm00001d011132_P001	AT1G72770.1	19407142
AT1G01360.1	Zm00001d011202_P002	AT1G72770.1	19407142
AT1G01360.1	Zm00001d038846_P001	AT1G72770.1	19407142
AT1G01360.1	Zm00001d039163_P002	AT1G72770.1	19407142
AT1G01360.1	Zm00001d044301_P001	AT1G72770.1	19407142
AT1G01360.1	Zm00001d009747_P001	AT1G72770.1	19407143
AT1G01360.1	Zm00001d011131_P001	AT1G72770.1	19407143
AT1G01360.1	Zm00001d011132_P001	AT1G72770.1	19407143
AT1G01360.1	Zm00001d011202_P002	AT1G72770.1	19407143
AT1G01360.1	Zm00001d038846_P001	AT1G72770.1	19407143
AT1G01360.1	Zm00001d039163_P002	AT1G72770.1	19407143
AT1G01360.1	Zm00001d044301_P001	AT1G72770.1	19407143
AT4G01026.1	Zm00001d009747_P001	AT1G72770.1	19407142
AT4G01026.1	Zm00001d011131_P001	AT1G72770.1	19407142
AT4G01026.1	Zm00001d011132_P001	AT1G72770.1	19407142
AT4G01026.1	Zm00001d011202_P002	AT1G72770.1	19407142
AT4G01026.1	Zm00001d038846_P001	AT1G72770.1	19407142
AT4G01026.1	Zm00001d039163_P002	AT1G72770.1	19407142
AT4G01026.1	Zm00001d044301_P001	AT1G72770.1	19407142
AT4G27920.1	Zm00001d009747_P001	AT1G72770.1	19407142
AT4G27920.1	Zm00001d011131_P001	AT1G72770.1	19407142
AT4G27920.1	Zm00001d011132_P001	AT1G72770.1	19407142
AT4G27920.1	Zm00001d011202_P002	AT1G72770.1	19407142
AT4G27920.1	Zm00001d038846_P001	AT1G72770.1	19407142
AT4G27920.1	Zm00001d039163_P002	AT1G72770.1	19407142
AT4G27920.1	Zm00001d044301_P001	AT1G72770.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04864	Sorghum	cytosol	91.71	94.31
Zm00001d016105_P001	Maize	cytosol	90.32	92.45
Os02t0255500-01	Rice	cytosol	85.71	91.18
VIT_02s0025g01340.t01	Wine grape	cytosol	65.44	76.76
VIT_16s0050g02620.t01	Wine grape	cytosol	63.13	74.05
KRH47929	Soybean	cytosol	62.67	73.51
PGSC0003DMT400012888	Potato	cytosol	59.91	73.45
GSMUA_Achr10P...	Banana	cytosol	62.67	73.12
KRH18155	Soybean	cytosol	63.59	72.25
KRH65845	Soybean	cytosol	63.59	71.5
PGSC0003DMT400031686	Potato	cytosol	62.21	71.43
Solyc08g082180.2.1	Tomato	cytosol	62.21	71.43
Solyc12g055990.1.1	Tomato	cytosol	59.45	71.27
GSMUA_Achr2P19970_001	Banana	cytosol	60.83	70.97
GSMUA_Achr4P08490_001	Banana	cytosol	64.98	70.85
GSMUA_AchrUn_...	Banana	cytosol	60.37	70.43
GSMUA_Achr10P...	Banana	cytosol	60.37	70.43
Solyc03g007310.2.1	Tomato	cytosol	59.91	70.27
AT1G01360.1	Thale cress	cytosol	60.37	70.05
PGSC0003DMT400023511	Potato	cytosol	59.45	69.73
Bra033267.1-P	Field mustard	cytosol	59.45	69.35
AT5G53160.2	Thale cress	cytosol, nucleus, peroxisome	59.91	69.15
Bra003077.1-P	Field mustard	cytosol	58.53	69.02
CDY49462	Canola	cytosol	58.53	69.02
CDY15183	Canola	cytosol	59.45	68.98
CDX90028	Canola	cytosol	59.45	68.62
CDY04688	Canola	cytosol	58.53	68.28
CDY61488	Canola	cytosol	57.6	67.93
Zm00001d037719_P001	Maize	cytosol	61.29	67.51
CDX96197	Canola	cytosol	58.06	67.02
KRH53449	Soybean	cytosol	58.99	67.02
Zm00001d010445_P001	Maize	cytosol	60.83	67.01
CDY64350	Canola	cytosol	56.22	66.67
CDY38728	Canola	cytosol	56.22	66.3
Solyc01g095700.2.1	Tomato	cytosol	56.68	66.13
GSMUA_Achr3P03480_001	Banana	cytosol	62.67	66.02
Bra022634.1-P	Field mustard	cytosol	57.14	65.96
Bra029093.1-P	Field mustard	cytosol	55.76	65.76
CDY27022	Canola	cytosol	56.68	65.43
Bra000938.1-P	Field mustard	cytosol	58.06	65.28
CDX74368	Canola	cytosol	58.06	65.28
PGSC0003DMT400000606	Potato	cytosol	55.76	65.05
CDY25052	Canola	cytosol	55.76	64.71
CDX91871	Canola	cytosol	57.14	64.25
VIT_15s0046g01050.t01	Wine grape	cytosol	55.76	63.02
CDY53905	Canola	cytosol	53.92	62.57
Bra003463.1-P	Field mustard	cytosol	53.92	62.57
Bra026299.1-P	Field mustard	cytosol	52.53	61.96
AT4G27920.1	Thale cress	cytosol	52.07	61.75
CDX89219	Canola	cytosol	52.53	61.62
CDY70517	Canola	cytosol	52.07	61.08
GSMUA_Achr8P19910_001	Banana	mitochondrion	58.53	60.77
GSMUA_Achr4P15670_001	Banana	cytosol	52.07	60.43
Zm00001d002533_P001	Maize	cytosol	35.02	60.32
KRH06494	Soybean	cytosol, extracellular, vacuole	51.61	58.64
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	61.29	58.33
CDY07165	Canola	cytosol	15.67	56.67
AT4G01026.1	Thale cress	cytosol	54.84	56.4
KRH65286	Soybean	cytosol	21.66	51.65
KRH16733	Soybean	cytosol	24.42	50.48
Zm00001d038436_P001	Maize	plastid	41.94	45.5
Zm00001d016294_P001	Maize	cytosol	35.48	40.96
Zm00001d043014_P001	Maize	cytosol	40.09	40.85
Zm00001d047705_P001	Maize	plastid	39.63	39.45
Zm00001d028793_P001	Maize	cytosol, mitochondrion, plastid	39.63	39.09
Zm00001d047037_P001	Maize	cytosol	35.94	38.05
Zm00001d030045_P001	Maize	cytosol	36.87	37.74
Zm00001d012475_P001	Maize	cytosol	40.55	28.21

Protein Annotations

EMBL:BT035072	EMBL:KJ855104	EnsemblPlants:Zm00001d053396_P001	EnsemblPlants:Zm00001d053396_T001	EnsemblPlantsGene:Zm00001d053396	EntrezGene:100272864
Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase	InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF16
PFAM:PF10604	ProteinID:AQK59370.1	SEG:seg	SUPFAM:SSF55961	UniParc:UPI00017B669A	UniProt:B4FD84
MapMan:11.1.2.1.1.1	:	:	:	:	:

Description

Abscisic acid receptor PYL9

Coordinates

chr4:-:229215684..229219292

Molecular Weight (calculated)

24284.0 Da

IEP (calculated)

6.163

GRAVY (calculated)

-0.381

Length

217 amino acids

Sequence
(BLAST)

001: MVVEMDGGVG VAAAGGGGAQ TPAPPPPRRW RLADERCDLR AMETDYVRRF HRHEPRDHQC SSAVAKHIKA PVHLVWSLVR RFDQPQLFKP FVSRCEMKGN
101: IEIGSVREVN VKSGLPATRS TERLELLDDD ERILSVRFVG GDHRLQNYSS ILTVHPEVID GRPGTLVIES FVVDVPDGNT KDETCYFVEA LLKCNLRSLA
201: EVSEGQVIMD QTEPLDR

Best Arabidopsis Sequence Match ( AT5G53160.2 )
(BLAST)

001: MEANGIENLT NPNQEREFIR RHHKHELVDN QCSSTLVKHI NAPVHIVWSL VRRFDQPQKY KPFISRCVVK GNMEIGTVRE VDVKSGLPAT RSTERLELLD
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV

Arabidopsis Description

PYL8RCAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UJN3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.