Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15183 | Canola | cytosol | 90.91 | 90.91 |
| Bra033267.1-P | Field mustard | cytosol | 90.37 | 90.86 |
| CDX90028 | Canola | cytosol | 90.37 | 89.89 |
| CDY04688 | Canola | cytosol | 88.77 | 89.25 |
| KRH47929 | Soybean | cytosol | 78.07 | 78.92 |
| VIT_02s0025g01340.t01 | Wine grape | cytosol | 77.01 | 77.84 |
| PGSC0003DMT400012888 | Potato | cytosol | 71.12 | 75.14 |
| Solyc12g055990.1.1 | Tomato | cytosol | 72.19 | 74.59 |
| GSMUA_Achr10P... | Banana | cytosol | 73.26 | 73.66 |
| Solyc08g082180.2.1 | Tomato | cytosol | 73.8 | 73.02 |
| PGSC0003DMT400031686 | Potato | cytosol | 73.8 | 73.02 |
| AT4G01026.1 | Thale cress | cytosol | 79.68 | 70.62 |
| AT5G53160.2 | Thale cress | cytosol, nucleus, peroxisome | 70.59 | 70.21 |
| GSMUA_Achr2P19970_001 | Banana | cytosol | 69.52 | 69.89 |
| GSMUA_AchrUn_... | Banana | cytosol | 68.98 | 69.35 |
| GSMUA_Achr10P... | Banana | cytosol | 67.91 | 68.28 |
| HORVU0Hr1G032390.2 | Barley | cytosol, extracellular | 31.02 | 67.44 |
| TraesCS1D01G126900.1 | Wheat | cytosol | 71.66 | 65.37 |
| TraesCS1A01G126800.1 | Wheat | cytosol | 71.66 | 65.37 |
| GSMUA_Achr3P03480_001 | Banana | cytosol | 71.66 | 65.05 |
| AT4G27920.1 | Thale cress | cytosol | 63.64 | 65.03 |
| Zm00001d037719_P001 | Maize | cytosol | 68.45 | 64.97 |
| TraesCS1B01G145800.1 | Wheat | cytosol | 71.12 | 64.88 |
| Os02t0255500-01 | Rice | cytosol | 70.59 | 64.71 |
| EES17886 | Sorghum | cytosol | 67.91 | 64.47 |
| Zm00001d010445_P001 | Maize | cytosol | 67.91 | 64.47 |
| Os05t0213500-01 | Rice | cytosol, nucleus | 71.66 | 64.11 |
| EES04864 | Sorghum | cytosol | 72.19 | 63.98 |
| Zm00001d016105_P001 | Maize | cytosol | 72.19 | 63.68 |
| KRH06494 | Soybean | cytosol, extracellular, vacuole | 64.71 | 63.35 |
| Zm00001d053396_P001 | Maize | cytosol | 70.05 | 60.37 |
| Zm00001d002533_P001 | Maize | cytosol | 40.11 | 59.52 |
| GSMUA_Achr8P19910_001 | Banana | mitochondrion | 66.31 | 59.33 |
| GSMUA_Achr2P15420_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 70.05 | 57.46 |
| Os02t0255300-00 | Rice | cytosol, plastid | 53.48 | 55.56 |
| TraesCS7B01G232100.1 | Wheat | cytoskeleton, cytosol, nucleus | 57.22 | 54.87 |
| Os06t0528300-00 | Rice | cytosol | 59.89 | 54.37 |
| Os06t0527800-01 | Rice | cytosol | 59.36 | 53.88 |
| HORVU7Hr1G079270.1 | Barley | cytosol | 56.68 | 53.81 |
| TraesCS7D01G328000.1 | Wheat | cytosol | 56.15 | 53.3 |
| TraesCS7A01G350800.1 | Wheat | cytosol | 54.55 | 51.78 |
| Os06t0526400-00 | Rice | cytosol | 51.87 | 49.49 |
| AT5G45860.1 | Thale cress | cytosol | 42.25 | 49.07 |
| AT5G45870.1 | Thale cress | cytosol | 41.18 | 48.43 |
| HORVU1Hr1G030390.2 | Barley | extracellular, mitochondrion, plasma membrane | 71.66 | 46.05 |
| HORVU3Hr1G054230.1 | Barley | mitochondrion | 37.43 | 44.03 |
| AT2G38310.1 | Thale cress | plastid | 48.13 | 43.48 |
| AT4G18620.1 | Thale cress | cytosol | 37.97 | 43.29 |
| AT5G05440.1 | Thale cress | cytosol | 44.92 | 41.38 |
| AT4G17870.1 | Thale cress | cytosol | 41.18 | 40.31 |
| AT2G26040.1 | Thale cress | cytosol | 40.64 | 40.0 |
| AT2G40330.1 | Thale cress | cytosol | 43.32 | 37.67 |
| AT5G46790.1 | Thale cress | nucleus | 41.18 | 34.84 |
| AT1G73000.1 | Thale cress | cytosol, plastid | 36.36 | 32.54 |
| Os06t0526466-00 | Rice | cytosol, mitochondrion | 21.93 | 29.71 |
Protein Annotations
| MapMan:11.1.2.1.1.1 | Gene3D:3.30.530.20 | PDB:3OQU | PDB:3W9R | EntrezGene:838452 | UniProt:A0A178W4H4 |
| ProteinID:AAF97339.1 | ProteinID:AEE27277.1 | EMBL:AK227623 | ArrayExpress:AT1G01360 | EnsemblPlantsGene:AT1G01360 | RefSeq:AT1G01360 |
| TAIR:AT1G01360 | RefSeq:AT1G01360-TAIR-G | EnsemblPlants:AT1G01360.1 | TAIR:AT1G01360.1 | EMBL:AY087967 | EMBL:BT006399 |
| GO:GO:0003674 | GO:GO:0004864 | GO:GO:0004871 | GO:GO:0004872 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005886 |
| GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 |
| GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009987 | GO:GO:0010427 | GO:GO:0016020 | GO:GO:0019538 |
| GO:GO:0030234 | GO:GO:0032515 | GO:GO:0038023 | GO:GO:0042803 | GO:GO:0043086 | InterPro:IPR023393 |
| RefSeq:NP_563626.1 | ProteinID:OAP12964.1 | PFAM:PF10604 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR31213 | PANTHER:PTHR31213:SF4 | InterPro:Polyketide_cyclase/dehydratase | UniProt:Q84MC7 | Symbol:RCAR1 |
| SUPFAM:SSF55961 | InterPro:START-like_dom_sf | UniParc:UPI0000162BE3 | : | : | : |
Description
PYL9RCAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4H4]
Coordinates
chr1:+:141870..143261
Molecular Weight (calculated)
20902.1 Da
IEP (calculated)
6.301
GRAVY (calculated)
-0.225
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MMDGVEGGTA MYGGLETVQY VRTHHQHLCR ENQCTSALVK HIKAPLHLVW SLVRRFDQPQ KYKPFVSRCT VIGDPEIGSL REVNVKSGLP ATTSTERLEL
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.