Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- mitochondrion 3
- nucleus 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0583100-01 | |
| Os05t0537400-00 | |
| Os05t0592800-02 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0528300-00 | Rice | cytosol | 56.52 | 37.86 |
| Os06t0527800-01 | Rice | cytosol | 55.07 | 36.89 |
| CDY07165 | Canola | cytosol | 15.94 | 36.67 |
| Os06t0526400-00 | Rice | cytosol | 51.45 | 36.22 |
| Os02t0255500-01 | Rice | cytosol | 45.65 | 30.88 |
| TraesCS7D01G328000.1 | Wheat | cytosol | 41.3 | 28.93 |
| TraesCS7B01G232100.1 | Wheat | cytoskeleton, cytosol, nucleus | 38.41 | 27.18 |
| HORVU7Hr1G079270.1 | Barley | cytosol | 38.41 | 26.9 |
| TraesCS7A01G350800.1 | Wheat | cytosol | 38.41 | 26.9 |
| KRH18155 | Soybean | cytosol | 36.96 | 26.7 |
| KRH65845 | Soybean | cytosol | 36.23 | 25.91 |
| GSMUA_Achr10P... | Banana | cytosol | 34.06 | 25.27 |
| GSMUA_Achr10P... | Banana | cytosol | 34.06 | 25.27 |
| VIT_16s0050g02620.t01 | Wine grape | cytosol | 33.33 | 24.86 |
| GSMUA_Achr2P19970_001 | Banana | cytosol | 33.33 | 24.73 |
| AT4G27920.1 | Thale cress | cytosol | 31.88 | 24.04 |
| CDX96197 | Canola | cytosol | 32.61 | 23.94 |
| Bra003077.1-P | Field mustard | cytosol | 31.88 | 23.91 |
| CDY49462 | Canola | cytosol | 31.88 | 23.91 |
| Solyc03g007310.2.1 | Tomato | cytosol | 31.88 | 23.78 |
| VIT_02s0025g01340.t01 | Wine grape | cytosol | 31.88 | 23.78 |
| Solyc12g055990.1.1 | Tomato | cytosol | 31.16 | 23.76 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.88 | 23.66 |
| GSMUA_Achr4P08490_001 | Banana | cytosol | 34.06 | 23.62 |
| Bra022634.1-P | Field mustard | cytosol | 31.88 | 23.4 |
| AT5G53160.2 | Thale cress | cytosol, nucleus, peroxisome | 31.88 | 23.4 |
| CDY61488 | Canola | cytosol | 31.16 | 23.37 |
| PGSC0003DMT400023511 | Potato | cytosol | 31.16 | 23.24 |
| PGSC0003DMT400012888 | Potato | cytosol | 29.71 | 23.16 |
| CDY64350 | Canola | cytosol | 30.43 | 22.95 |
| CDY27022 | Canola | cytosol | 31.16 | 22.87 |
| CDY38728 | Canola | cytosol | 30.43 | 22.83 |
| KRH53449 | Soybean | cytosol | 31.16 | 22.51 |
| Bra029093.1-P | Field mustard | cytosol | 29.71 | 22.28 |
| CDY70517 | Canola | cytosol | 29.71 | 22.16 |
| KRH47929 | Soybean | cytosol | 29.71 | 22.16 |
| CDY25052 | Canola | cytosol | 29.71 | 21.93 |
| AT1G01360.1 | Thale cress | cytosol | 29.71 | 21.93 |
| GSMUA_Achr3P03480_001 | Banana | cytosol | 32.61 | 21.84 |
| PGSC0003DMT400031686 | Potato | cytosol | 29.71 | 21.69 |
| GSMUA_Achr4P15670_001 | Banana | cytosol | 28.99 | 21.39 |
| Bra003463.1-P | Field mustard | cytosol | 28.99 | 21.39 |
| Bra026299.1-P | Field mustard | cytosol | 28.26 | 21.2 |
| Solyc08g082180.2.1 | Tomato | cytosol | 28.99 | 21.16 |
| CDX89219 | Canola | cytosol | 28.26 | 21.08 |
| CDY04688 | Canola | cytosol | 28.26 | 20.97 |
| Bra033267.1-P | Field mustard | cytosol | 28.26 | 20.97 |
| CDY15183 | Canola | cytosol | 28.26 | 20.86 |
| CDY53905 | Canola | cytosol | 28.26 | 20.86 |
| CDX90028 | Canola | cytosol | 28.26 | 20.74 |
| GSMUA_Achr8P19910_001 | Banana | mitochondrion | 31.16 | 20.57 |
| Os05t0213500-01 | Rice | cytosol, nucleus | 31.16 | 20.57 |
| CDX91871 | Canola | cytosol | 28.26 | 20.21 |
| CDX74368 | Canola | cytosol | 28.26 | 20.21 |
| Bra000938.1-P | Field mustard | cytosol | 28.26 | 20.21 |
| VIT_15s0046g01050.t01 | Wine grape | cytosol | 27.54 | 19.79 |
| Os02t0255300-00 | Rice | cytosol, plastid | 25.36 | 19.44 |
| GSMUA_Achr2P15420_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 31.16 | 18.86 |
| KRH06494 | Soybean | cytosol, extracellular, vacuole | 25.36 | 18.32 |
| Solyc01g095700.2.1 | Tomato | cytosol | 24.64 | 18.28 |
| PGSC0003DMT400000606 | Potato | cytosol | 23.91 | 17.74 |
| AT4G01026.1 | Thale cress | cytosol | 26.09 | 17.06 |
| KRH16733 | Soybean | cytosol | 10.14 | 13.33 |
| Os10t0573400-01 | Rice | plasma membrane | 20.29 | 13.21 |
| Os06t0562200-01 | Rice | cytosol | 18.84 | 12.56 |
| Os05t0473000-01 | Rice | cytosol | 18.12 | 11.52 |
| Os02t0226801-00 | Rice | cytosol | 16.67 | 10.95 |
| Os03t0297600-01 | Rice | cytosol | 16.67 | 10.04 |
| Os01t0827800-00 | Rice | plastid | 18.12 | 9.77 |
| KRH65286 | Soybean | cytosol | 5.8 | 8.79 |
Protein Annotations
| EnsemblPlants:Os06t0526466-00 | EnsemblPlantsGene:Os06g0526466 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:START-like_dom_sf | ncoils:Coil |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF16 | ProteinID:BAS98039.1 | SEG:seg | UniParc:UPI000393B2EB | UniProt:A0A0P0WX75 |
| MapMan:35.2 | : | : | : | : | : |
Description
endosperm-specific gene 89, pyrabactin resistance-like 13Conserved hypothetical protein. (Os06t0526466-00)
Coordinates
chr6:-:19508718..19511234
Molecular Weight (calculated)
15424.4 Da
IEP (calculated)
4.405
GRAVY (calculated)
-0.049
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGCTGGAGG VAAGRLPAVS LQQAQWKLVD ERCELREEEM EYVRWFHRYE LVATGATPSL PNTSGCPSKL DLWDSDTVTT KTIDYSSTLI IHLEVIDGQL
101: VTLVIESFVV DILEGNTKDE ISYFIENLLK FNLRTLRV
101: VTLVIESFVV DILEGNTKDE ISYFIENLLK FNLRTLRV
001: MEANGIENLT NPNQEREFIR RHHKHELVDN QCSSTLVKHI NAPVHIVWSL VRRFDQPQKY KPFISRCVVK GNMEIGTVRE VDVKSGLPAT RSTERLELLD
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV
Arabidopsis Description
PYL8RCAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UJN3]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.