CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49462	Canola	cytosol	97.83	97.83
Bra003077.1-P	Field mustard	cytosol	97.28	97.28
CDY64350	Canola	cytosol	89.67	90.16
CDY38728	Canola	cytosol	89.67	89.67
AT5G53160.2	Thale cress	cytosol, nucleus, peroxisome	91.3	89.36
CDX96197	Canola	cytosol	90.22	88.3
CDY27022	Canola	cytosol	88.59	86.7
VIT_16s0050g02620.t01	Wine grape	cytosol	78.26	77.84
Solyc03g007310.2.1	Tomato	cytosol	77.72	77.3
PGSC0003DMT400023511	Potato	cytosol	77.72	77.3
KRH65845	Soybean	cytosol	79.35	75.65
KRH18155	Soybean	cytosol	77.72	74.87
CDY70517	Canola	cytosol	73.37	72.97
CDX89219	Canola	cytosol	72.83	72.43
GSMUA_Achr10P...	Banana	cytosol	71.74	70.97
CDY25052	Canola	cytosol	71.2	70.05
CDY04688	Canola	cytosol	70.65	69.89
KRH53449	Soybean	cytosol	72.28	69.63
GSMUA_Achr2P19970_001	Banana	cytosol	70.11	69.35
CDY15183	Canola	cytosol	70.11	68.98
GSMUA_Achr10P...	Banana	cytosol	69.57	68.82
HORVU0Hr1G032390.2	Barley	cytosol, extracellular	32.07	68.6
GSMUA_AchrUn_...	Banana	cytosol	69.02	68.28
CDX90028	Canola	cytosol	69.57	68.09
CDX74368	Canola	cytosol	71.2	67.88
CDY53905	Canola	cytosol	66.85	65.78
CDX91871	Canola	cytosol	68.48	65.28
Os02t0255500-01	Rice	cytosol	72.28	65.2
GSMUA_Achr3P03480_001	Banana	cytosol	71.74	64.08
CDY07165	Canola	cytosol	20.65	63.33
Zm00001d016105_P001	Maize	cytosol	71.2	61.79
TraesCS1A01G126800.1	Wheat	cytosol	67.93	60.98
TraesCS1B01G145800.1	Wheat	cytosol	67.93	60.98
TraesCS1D01G126900.1	Wheat	cytosol	67.93	60.98
Os05t0213500-01	Rice	cytosol, nucleus	69.02	60.77
EES04864	Sorghum	cytosol	69.57	60.66
EES17886	Sorghum	cytosol	64.13	59.9
GSMUA_Achr8P19910_001	Banana	mitochondrion	67.93	59.81
Zm00001d037719_P001	Maize	cytosol	63.59	59.39
Zm00001d010445_P001	Maize	cytosol	63.04	58.88
Zm00001d053396_P001	Maize	cytosol	67.93	57.6
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	70.11	56.58
KRH65286	Soybean	cytosol	27.72	56.04
KRH16733	Soybean	cytosol	30.98	54.29
Os02t0255300-00	Rice	cytosol, plastid	52.72	53.89
Zm00001d002533_P001	Maize	cytosol	35.87	52.38
TraesCS7B01G232100.1	Wheat	cytoskeleton, cytosol, nucleus	54.89	51.79
Os06t0528300-00	Rice	cytosol	57.61	51.46
Os06t0527800-01	Rice	cytosol	57.07	50.97
HORVU7Hr1G079270.1	Barley	cytosol	54.35	50.76
TraesCS7D01G328000.1	Wheat	cytosol	53.26	49.75
Os06t0526400-00	Rice	cytosol	52.72	49.49
TraesCS7A01G350800.1	Wheat	cytosol	51.09	47.72
CDY68675	Canola	cytosol	38.59	43.83
CDY58053	Canola	cytosol	38.59	43.83
HORVU1Hr1G030390.2	Barley	extracellular, mitochondrion, plasma membrane	67.93	42.96
CDX91449	Canola	plastid	47.83	42.51
HORVU3Hr1G054230.1	Barley	mitochondrion	36.41	42.14
CDY69797	Canola	cytosol	43.48	41.88
CDY54453	Canola	plastid	47.28	41.83
CDY54415	Canola	cytosol	46.2	41.67
CDY18391	Canola	plastid	46.2	41.67
CDY07739	Canola	plastid	46.74	41.55
CDY14471	Canola	plastid	46.74	41.55
CDX90440	Canola	cytosol	42.93	41.36
CDY01498	Canola	cytosol	42.93	41.36
CDX76731	Canola	cytosol	41.85	40.96
CDY11503	Canola	cytosol	41.85	40.96
CDY70860	Canola	cytosol	41.3	40.86
CDX70150	Canola	cytosol	44.02	39.71
CDX98844	Canola	cytosol	44.02	39.71
CDY04951	Canola	cytosol	42.39	39.59
CDY58505	Canola	nucleus	45.11	39.52
CDY72318	Canola	cytosol	42.93	38.92
CDX76554	Canola	cytosol	32.61	38.71
CDX77691	Canola	nucleus	45.11	38.6
CDX99450	Canola	cytosol	34.78	38.55
CDY58019	Canola	cytosol	34.78	38.55
CDX78879	Canola	cytosol	34.78	38.55
CDX80959	Canola	cytosol	42.39	38.42
CDY08877	Canola	cytosol	32.07	38.06
CDX93191	Canola	cytosol	41.85	37.93
CDY52923	Canola	cytosol	41.85	37.56
CDY24911	Canola	cytosol, mitochondrion	41.85	36.15
CDY07608	Canola	cytosol, mitochondrion	41.3	35.85
CDX74796	Canola	cytosol, nucleus, plastid	40.76	35.38
CDY48030	Canola	plastid	39.13	35.12
CDY68316	Canola	nucleus	36.41	35.08
CDY18867	Canola	cytosol, mitochondrion, nucleus, plastid	40.22	34.91
CDX82120	Canola	plastid	38.59	34.63
CDY22516	Canola	plastid	38.59	34.63
CDY03194	Canola	nucleus	35.87	34.55
Os06t0526466-00	Rice	cytosol, mitochondrion	23.37	31.16

Protein Annotations

EnsemblPlants:CDY61488	EnsemblPlantsGene:GSBRNA2T00033895001	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase	InterPro:START-like_dom_sf
PANTHER:PTHR31213	PANTHER:PTHR31213:SF12	PFAM:PF10604	ProteinID:CDY61488	ProteinID:CDY61488.1	SUPFAM:SSF55961
UniParc:UPI0004EC753E	UniProt:A0A078JAZ3	MapMan:11.1.2.1.1.1	:	:	:

Description

BnaCnng37890DBnaCnng37890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JAZ3]

Coordinates

chrLK034002:+:1608..3135

Molecular Weight (calculated)

20933.9 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.462

Length

184 amino acids

Sequence
(BLAST)

001: MEANNGNQER EYIRRHHKHE LERENQCSTT LVKHINAPVH IVWSLVRRFD EPQKYKPFIS RCVVKGNMEI GTVREVDVRS GLPATRSTER LELLDDNEHI
101: LSIRIVGGDH RLKNYSSVIS LHPETIEGGR IGTLLIESFV VDVPEGNTKD ETCYFVEALI KCNLKSLADI SERLAVQDTT GGFP

Best Arabidopsis Sequence Match ( AT5G53160.2 )
(BLAST)

001: MEANGIENLT NPNQEREFIR RHHKHELVDN QCSSTLVKHI NAPVHIVWSL VRRFDQPQKY KPFISRCVVK GNMEIGTVRE VDVKSGLPAT RSTERLELLD
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV

Arabidopsis Description

PYL8RCAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UJN3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.