CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58019	Canola	cytosol	99.4	99.4
CDX99450	Canola	cytosol	98.8	98.8
AT4G18620.1	Thale cress	cytosol	78.92	79.88
CDY58053	Canola	cytosol	60.84	62.35
CDY68675	Canola	cytosol	60.84	62.35
GSMUA_Achr4P10630_001	Banana	mitochondrion	48.8	50.31
KRH21267	Soybean	cytosol	50.0	44.86
KRH11022	Soybean	cytosol	48.8	43.78
CDY18391	Canola	plastid	51.2	41.67
CDY54415	Canola	cytosol	51.2	41.67
CDY04951	Canola	cytosol	49.4	41.62
CDX91449	Canola	plastid	51.81	41.55
CDY07739	Canola	plastid	51.2	41.06
CDY14471	Canola	plastid	51.2	41.06
CDY72318	Canola	cytosol	50.0	40.89
CDX76731	Canola	cytosol	45.78	40.43
CDY11503	Canola	cytosol	45.78	40.43
CDX93191	Canola	cytosol	49.4	40.39
CDY54453	Canola	plastid	50.6	40.38
CDY70860	Canola	cytosol	45.18	40.32
CDY52923	Canola	cytosol	49.4	40.0
CDX80959	Canola	cytosol	48.8	39.9
CDY01498	Canola	cytosol	45.18	39.27
CDX90440	Canola	cytosol	45.18	39.27
CDY69797	Canola	cytosol	45.18	39.27
CDX70150	Canola	cytosol	48.19	39.22
CDX98844	Canola	cytosol	47.59	38.73
CDY07608	Canola	cytosol, mitochondrion	49.4	38.68
PGSC0003DMT400026521	Potato	cytosol	43.98	38.22
CDX74796	Canola	cytosol, nucleus, plastid	48.8	38.21
CDY24911	Canola	cytosol, mitochondrion	48.8	38.03
CDX89219	Canola	cytosol	41.57	37.3
CDY18867	Canola	cytosol, mitochondrion, nucleus, plastid	47.59	37.26
CDX90028	Canola	cytosol	42.17	37.23
CDY15183	Canola	cytosol	41.57	36.9
CDY04688	Canola	cytosol	40.96	36.56
CDY70517	Canola	cytosol	40.36	36.22
CDY58505	Canola	nucleus	45.78	36.19
CDY25052	Canola	cytosol	40.36	35.83
CDX96197	Canola	cytosol	40.36	35.64
CDX77691	Canola	nucleus	45.78	35.35
CDY49462	Canola	cytosol	39.16	35.33
CDY53905	Canola	cytosol	39.76	35.29
CDY27022	Canola	cytosol	39.76	35.11
CDY64350	Canola	cytosol	38.55	34.97
CDY38728	Canola	cytosol	38.55	34.78
CDY61488	Canola	cytosol	38.55	34.78
CDX74368	Canola	cytosol	39.76	34.2
CDX76554	Canola	cytosol	31.93	34.19
Solyc02g076770.1.1	Tomato	cytosol	44.58	33.95
CDX91871	Canola	cytosol	39.16	33.68
GSMUA_Achr4P15170_001	Banana	cytosol	50.6	33.6
CDY08877	Canola	cytosol	31.33	33.55
CDY07165	Canola	cytosol	11.45	31.67
CDY68316	Canola	nucleus	35.54	30.89
CDY03194	Canola	nucleus	35.54	30.89
CDY48030	Canola	plastid	37.95	30.73
CDX82120	Canola	plastid	37.95	30.73
CDY22516	Canola	plastid	37.95	30.73

Protein Annotations

EnsemblPlants:CDX78879	EnsemblPlantsGene:GSBRNA2T00131357001	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase	InterPro:START-like_dom_sf
PANTHER:PTHR31213	PANTHER:PTHR31213:SF8	PFAM:PF10604	ProteinID:CDX78879	ProteinID:CDX78879.1	SUPFAM:SSF55961
UniParc:UPI0004EE3A20	MapMan:11.1.2.1.1.1	:	:	:	:

Description

BnaA01g09460D

Coordinates

chrLK031816:+:592667..593167

Molecular Weight (calculated)

18398.8 Da

IEP (calculated)

5.071

GRAVY (calculated)

-0.233

Length

166 amino acids

Sequence
(BLAST)

001: MESSERKRCR STVVETIEAP LSLVWSILRR FDRPQAYKRF VKSCTIRFNG DGDGGEGSVR DVALVSGVPG NFSTERLDEL DDESHVMVVS IIGGNHRLVN
101: FTSKTMVVAS PDDEADKTVV VESYIVDVPE GNSEEDTILF VDTIIRYNLV SLAKLTKKKM GHSTSV

Best Arabidopsis Sequence Match ( AT4G18620.1 )
(BLAST)

001: MESSKQKRCR SSVVETIEAP LPLVWSILRS FDKPQAYQRF VKSCTMRSGG GGGKGGEGKG SVRDVTLVSG FPADFSTERL EELDDESHVM VVSIIGGNHR
101: LVNYKSKTKV VASPEDMAKK TVVVESYVVD VPEGTSEEDT IFFVDNIIRY NLTSLAKLTK KMMK

Arabidopsis Description

PYL13RCAR7 [Source:UniProtKB/TrEMBL;Acc:A0A178V4P0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.