CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH73525

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G45870.1	KRH73525	AT3G11410.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21267	Soybean	cytosol	93.51	93.51
CDY68675	Canola	cytosol	52.97	60.49
CDY58053	Canola	cytosol	52.97	60.49
AT5G45870.1	Thale cress	cytosol	50.27	58.49
AT5G45860.1	Thale cress	cytosol	50.27	57.76
Bra025048.1-P	Field mustard	cytosol	51.35	55.88
GSMUA_Achr4P10630_001	Banana	mitochondrion	45.95	52.8
AT4G18620.1	Thale cress	cytosol	45.41	51.22
CDX78879	Canola	cytosol	43.78	48.8
CDX99450	Canola	cytosol	43.78	48.8
CDY58019	Canola	cytosol	43.78	48.8
KRH00319	Soybean	cytosol	46.49	48.59
Bra013334.1-P	Field mustard	cytosol	42.7	47.59
KRH49452	Soybean	plastid	45.41	47.19
PGSC0003DMT400026521	Potato	cytosol	48.11	46.6
KRH47929	Soybean	cytosol	46.49	46.49
KRH65286	Soybean	cytosol	22.7	46.15
KRH18155	Soybean	cytosol	47.03	45.55
KRH53449	Soybean	cytosol	46.49	45.03
KRH65845	Soybean	cytosol	46.49	44.56
GSMUA_Achr4P15170_001	Banana	cytosol	56.76	42.0
KRH16733	Soybean	cytosol	23.78	41.9
KRH06494	Soybean	cytosol, extracellular, vacuole	42.7	41.36
KRH73249	Soybean	plastid	46.49	41.35
KRH76014	Soybean	cytosol	47.03	40.28
Solyc02g076770.1.1	Tomato	cytosol	47.03	39.91
KRH14908	Soybean	plastid	47.03	39.91
KRH61500	Soybean	cytosol	40.0	39.15
KRH52194	Soybean	cytosol	39.46	39.04
KRH05492	Soybean	cytosol	39.46	38.83
KRH45453	Soybean	cytosol	43.78	38.21
KRH75621	Soybean	cytosol	43.24	37.38
KRH74424	Soybean	cytosol	43.24	36.2
KRH15519	Soybean	cytosol	38.38	33.81
KRH31193	Soybean	cytosol, golgi, plastid	46.49	33.46
KRH39536	Soybean	plastid	42.16	29.32

Protein Annotations

EMBL:ACUP02009171	EnsemblPlants:KRH11022	EnsemblPlantsGene:GLYMA_15G083200	EntrezGene:100777324	Gene3D:3.30.530.20	InterPro:IPR023393
InterPro:Polyketide_cyclase/dehydratase	InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF8	PFAM:PF10604	ProteinID:KRH11022
ProteinID:KRH11022.1	SUPFAM:SSF55961	UniParc:UPI000233AE95	UniProt:I1MES6	MapMan:11.1.2.1.1.1	:

Description

hypothetical protein

Coordinates

chr15:+:6359940..6361430

Molecular Weight (calculated)

20273.4 Da

IEP (calculated)

6.500

GRAVY (calculated)

-0.071

Length

185 amino acids

Sequence
(BLAST)

001: MLCKQNLETP TIKAMLNTYH ASKLPSNQCG SSLVQTIDAP LPLVWSLIRR FEYPQGYKLF VKKCTLLDGN GGIGSVREVM VTSGLPAGVS VERLDKLDDD
101: KHVFKFSIIG GDHRLVNYSS TITLHQEEEE YGGKTVAIES YAVDVPAGST VDDTCSFANT IIACNLRSLA KITEEMVCKA NQIKV

Best Arabidopsis Sequence Match ( AT5G45870.1 )
(BLAST)

001: MKTSQEQHVC GSTVVQTINA PLPLVWSILR RFDNPKTFKH FVKTCKLRSG DGGEGSVREV TVVSDLPASF SLERLDELDD ESHVMVISII GGDHRLVNYQ
101: SKTTVFVAAE EEKTVVVESY VVDVPEGNTE EETTLFADTI VGCNLRSLAK LSEKMMELT

Arabidopsis Description

PYL12Abscisic acid receptor PYL12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.