Factsheet for Bra013334.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99450	Canola	cytosol	96.99	96.99
AT4G18620.1	Thale cress	cytosol	77.71	78.66
Bra025048.1-P	Field mustard	cytosol	60.24	58.82
Bra028758.1-P	Field mustard	cytosol	49.4	49.7
GSMUA_Achr4P10630_001	Banana	mitochondrion	47.59	49.07
KRH21267	Soybean	cytosol	48.8	43.78
KRH11022	Soybean	cytosol	47.59	42.7
Bra017125.1-P	Field mustard	plastid	50.0	40.69
Bra000052.1-P	Field mustard	plastid	50.0	40.1
Bra005853.1-P	Field mustard	cytosol	48.8	39.9
Bra007772.1-P	Field mustard	cytosol	44.58	39.36
Bra017012.1-P	Field mustard	cytosol	48.19	39.02
Bra012635.1-P	Field mustard	cytosol	44.58	38.74
Bra005115.1-P	Field mustard	plastid	34.34	38.26
Bra009113.1-P	Field mustard	cytosol	46.99	38.24
Bra013262.1-P	Field mustard	cytosol	43.98	38.22
Bra000184.1-P	Field mustard	cytosol, mitochondrion	48.19	37.74
PGSC0003DMT400026521	Potato	cytosol	43.37	37.7
Bra004967.1-P	Field mustard	mitochondrion	47.59	37.26
Bra033267.1-P	Field mustard	cytosol	41.57	37.1
Bra026299.1-P	Field mustard	cytosol	40.36	36.41
Bra024995.1-P	Field mustard	nucleus	45.18	35.71
Bra029093.1-P	Field mustard	cytosol	39.16	35.33
Bra003077.1-P	Field mustard	cytosol	38.55	34.78
Bra003463.1-P	Field mustard	cytosol	39.16	34.76
Bra022634.1-P	Field mustard	cytosol	39.16	34.57
Bra000938.1-P	Field mustard	cytosol	39.76	34.2
Bra021032.1-P	Field mustard	cytosol	31.93	33.76
Solyc02g076770.1.1	Tomato	cytosol	43.98	33.49
GSMUA_Achr4P15170_001	Banana	cytosol	49.4	32.8
Bra017526.1-P	Field mustard	nucleus	33.73	30.6
Bra008064.1-P	Field mustard	plastid	36.75	29.76

Protein Annotations

MapMan:11.1.2.1.1.1	Gene3D:3.30.530.20	EnsemblPlantsGene:Bra013334	EnsemblPlants:Bra013334.1	EnsemblPlants:Bra013334.1-P	GO:GO:0003674
GO:GO:0004864	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
GO:GO:0030234	GO:GO:0032515	GO:GO:0043086	InterPro:IPR023393	UniProt:M4DA24	PFAM:PF10604
PANTHER:PTHR31213	PANTHER:PTHR31213:SF8	InterPro:Polyketide_cyclase/dehydratase	SUPFAM:SSF55961	InterPro:START-like_dom_sf	UniParc:UPI0002546265

Description

AT4G18620 (E=6e-066) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: Bet v I allergen family protein (TAIR:AT5G45870.1); Has 190 Blast hits to 190 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 178; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Coordinates

chrA01:+:5043988..5044488

Molecular Weight (calculated)

18381.8 Da

IEP (calculated)

4.754

GRAVY (calculated)

-0.217

Length

166 amino acids

Sequence
(BLAST)

001: MESSERKRCR STVVETIEAP LSLVWSILRR FDRPQAYKRF VKSCTIRFNG DGDGGEGSVR DVALVSGVPG NFSTERLDEL DDESYVMVVS IIGGNHRLVN
101: FTSKTMVVAS PDDEADKTVV VESYIVDVPE GNSEEDTILL VDTIIRYNLV SLAKLTKKKM GQSTSV

Best Arabidopsis Sequence Match ( AT4G18620.1 )
(BLAST)

001: MESSKQKRCR SSVVETIEAP LPLVWSILRS FDKPQAYQRF VKSCTMRSGG GGGKGGEGKG SVRDVTLVSG FPADFSTERL EELDDESHVM VVSIIGGNHR
101: LVNYKSKTKV VASPEDMAKK TVVVESYVVD VPEGTSEEDT IFFVDNIIRY NLTSLAKLTK KMMK

Arabidopsis Description

PYL13RCAR7 [Source:UniProtKB/TrEMBL;Acc:A0A178V4P0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.