Factsheet for Bra000184.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra016034.1-P
Bra039034.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40330.1	Bra016034.1-P	AT1G72770.1	19407142
AT2G40330.1	Bra016034.1-P	AT1G72770.1	19624469
AT2G40330.1	Bra039034.1-P	AT2G20000.1	17944809

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07608	Canola	cytosol, mitochondrion	100.0	100.0
Bra017012.1-P	Field mustard	cytosol	85.38	88.29
AT2G40330.1	Thale cress	cytosol	84.43	83.26
Bra004967.1-P	Field mustard	mitochondrion	81.6	81.6
Bra028758.1-P	Field mustard	cytosol	46.23	59.39
Solyc05g052420.1.1	Tomato	cytosol	22.64	58.54
TraesCS4A01G114400.1	Wheat	cytosol	48.11	56.98
Solyc03g095780.1.1	Tomato	plastid	52.36	55.22
TraesCS1B01G306800.1	Wheat	mitochondrion	50.47	55.15
PGSC0003DMT400053120	Potato	cytosol, plastid	51.89	54.73
PGSC0003DMT400053102	Potato	cytosol, plastid	51.89	54.73
PGSC0003DMT400053119	Potato	cytosol, plastid	51.89	54.73
KRH73249	Soybean	plastid	53.3	54.33
TraesCS1D01G293600.1	Wheat	mitochondrion, plastid	50.94	53.73
TraesCS1A01G297600.1	Wheat	mitochondrion	50.47	53.23
Bra000052.1-P	Field mustard	plastid	51.89	53.14
Bra017125.1-P	Field mustard	plastid	50.94	52.94
HORVU1Hr1G070420.1	Barley	mitochondrion	50.0	52.74
Zm00001d038436_P001	Maize	plastid	49.53	52.5
Bra025048.1-P	Field mustard	cytosol	41.98	52.35
TraesCS3B01G380300.1	Wheat	mitochondrion, plastid	50.47	51.69
HORVU3Hr1G088100.1	Barley	plastid	50.0	51.46
HORVU3Hr1G039010.1	Barley	plastid	50.0	51.46
Bra005853.1-P	Field mustard	cytosol	49.06	51.23
GSMUA_Achr9P04600_001	Banana	cytosol	34.43	51.05
Bra009113.1-P	Field mustard	cytosol	49.06	50.98
TraesCS3D01G342000.1	Wheat	plastid	49.53	50.97
PGSC0003DMT400069734	Potato	mitochondrion, plastid	50.0	50.96
PGSC0003DMT400061535	Potato	plastid	52.36	50.92
TraesCS3A01G348400.1	Wheat	plastid	49.06	50.49
KRH14908	Soybean	plastid	51.89	50.46
GSMUA_Achr6P32790_001	Banana	cytosol	50.0	50.24
Os05t0473000-01	Rice	cytosol	50.94	49.77
EES19683	Sorghum	plastid	50.47	49.54
GSMUA_Achr9P17980_001	Banana	cytosol	34.43	48.99
Bra005115.1-P	Field mustard	plastid	34.43	48.99
GSMUA_AchrUn_...	Banana	plastid	36.32	48.73
TraesCS4D01G191200.1	Wheat	cytosol	51.42	48.66
TraesCS4B01G189800.1	Wheat	cytosol	51.42	48.66
Zm00001d043014_P001	Maize	cytosol	48.58	48.36
HORVU4Hr1G055220.1	Barley	cytosol	50.94	48.21
Bra013334.1-P	Field mustard	cytosol	37.74	48.19
TraesCS2D01G087500.1	Wheat	plastid	48.58	48.13
TraesCS2B01G105300.1	Wheat	plastid	49.06	47.93
Zm00001d047705_P001	Maize	plastid	49.06	47.71
EER92405	Sorghum	plastid	49.53	47.3
Zm00001d028793_P001	Maize	cytosol, mitochondrion, plastid	48.58	46.82
Os03t0297600-01	Rice	cytosol	50.47	46.72
GSMUA_Achr11P...	Banana	cytosol, plastid	33.96	45.57
GSMUA_Achr5P29490_001	Banana	plastid	34.43	45.06
Bra007772.1-P	Field mustard	cytosol	39.62	44.68
Bra003463.1-P	Field mustard	cytosol	39.15	44.38
Bra033267.1-P	Field mustard	cytosol	38.68	44.09
GSMUA_Achr8P21220_001	Banana	cytosol	34.91	43.53
KRH31193	Soybean	cytosol, golgi, plastid	52.36	43.19
Bra026299.1-P	Field mustard	cytosol	37.26	42.93
Bra029093.1-P	Field mustard	cytosol	36.79	42.39
Solyc06g050500.2.1	Tomato	plastid	53.77	41.45
Bra003077.1-P	Field mustard	cytosol	35.85	41.3
Os01t0827800-00	Rice	plastid	49.53	41.02
Bra000938.1-P	Field mustard	cytosol	37.26	40.93
Bra012635.1-P	Field mustard	cytosol	36.32	40.31
Bra022634.1-P	Field mustard	cytosol	35.38	39.89
Bra008064.1-P	Field mustard	plastid	37.74	39.02
GSMUA_Achr10P...	Banana	cytosol, plastid	35.85	38.38
Bra013262.1-P	Field mustard	cytosol	34.43	38.22
Bra024995.1-P	Field mustard	nucleus	36.79	37.14
Bra017526.1-P	Field mustard	nucleus	31.6	36.61
OQU87775	Sorghum	endoplasmic reticulum, extracellular	46.23	36.03
TraesCS2A01G089400.1	Wheat	plastid	48.58	36.01
Bra021032.1-P	Field mustard	cytosol	26.42	35.67
Zm00001d012475_P001	Maize	cytosol	47.64	32.37

Protein Annotations

EnsemblPlants:Bra000184.1	EnsemblPlants:Bra000184.1-P	EnsemblPlantsGene:Bra000184	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF3	PFAM:PF10604	SEG:seg	SUPFAM:SSF55961
UniParc:UPI00025402CF	UniProt:M4C7K6	MapMan:11.1.2.1.1.1	:	:	:

Description

AT2G40330 (E=4e-096) | Bet v I allergen family protein

Coordinates

chrA03:-:9772566..9773204

Molecular Weight (calculated)

23525.7 Da

IEP (calculated)

7.074

GRAVY (calculated)

-0.347

Length

212 amino acids

Sequence
(BLAST)

001: MPTSIQFRRY STTAEAANAT VSTYHHHHHK HLQKVILTRG MADVPEHVEL SHTHVVGPSQ CFSVVVQDVD APSSAVWSIL SRFEHPQAYK HFVRSCHVAV
101: GDGREAGSVR EVRVVSGLPA TFSLERLEIM DEGHHIMSFS VVGGDHRLQN YRSVTTVNES PDDNKKTRVV ESYVVDVPAG NDKEETCSFA DTIVRCNLQS
201: LAKLAEKPSK LS

Best Arabidopsis Sequence Match ( AT2G40330.1 )
(BLAST)

001: MPTSIQFQRS STAAEAANAT VRNYPHHHQK QVQKVSLTRG MADVPEHVEL SHTHVVGPSQ CFSVVVQDVE APVSTVWSIL SRFEHPQAYK HFVKSCHVVI
101: GDGREVGSVR EVRVVSGLPA AFSLERLEIM DDDRHVISFS VVGGDHRLMN YKSVTTVHES EEDSDGKKRT RVVESYVVDV PAGNDKEETC SFADTIVRCN
201: LQSLAKLAEN TSKFS

Arabidopsis Description

PYL6Abscisic acid receptor PYL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8E3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.