Factsheet for GSMUA_Achr5P29490_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr1P19740_001
GSMUA_Achr3P26270_001
GSMUA_Achr5P29000_001
GSMUA_Achr6P15180_001
GSMUA_Achr7P24000_001
GSMUA_Achr8P05700_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38310.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT2G38310.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT2G38310.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT2G38310.1	GSMUA_Achr3P26270_001	AT1G72770.1	19624469
AT2G38310.1	GSMUA_Achr7P24000_001	AT1G72770.1	19624469
AT2G38310.1	GSMUA_Achr8P05700_001	AT1G72770.1	19624469
AT2G38310.1	GSMUA_Achr11P...	AT3G11410.1	19407142
AT2G38310.1	GSMUA_Achr5P29000_001	AT3G11410.1	19407142
AT2G38310.1	GSMUA_Achr6P15180_001	AT3G11410.1	19407142
AT2G38310.1	GSMUA_AchrUn_...	AT3G11410.1	19407142
AT2G38310.1	GSMUA_Achr11P...	AT5G59220.1	19407142
AT2G38310.1	GSMUA_Achr5P29000_001	AT5G59220.1	19407142
AT2G38310.1	GSMUA_Achr6P15180_001	AT5G59220.1	19407142
AT2G38310.1	GSMUA_AchrUn_...	AT5G59220.1	19407142
AT2G40330.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT2G40330.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT2G40330.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT2G40330.1	GSMUA_Achr3P26270_001	AT1G72770.1	19624469
AT2G40330.1	GSMUA_Achr7P24000_001	AT1G72770.1	19624469
AT2G40330.1	GSMUA_Achr8P05700_001	AT1G72770.1	19624469
AT2G40330.1	GSMUA_Achr1P19740_001	AT2G20000.1	17944809
AT5G05440.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT5G05440.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT5G05440.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT5G05440.1	GSMUA_Achr3P26270_001	AT1G72770.1	19624469
AT5G05440.1	GSMUA_Achr7P24000_001	AT1G72770.1	19624469
AT5G05440.1	GSMUA_Achr8P05700_001	AT1G72770.1	19624469

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, plastid	80.25	82.28
GSMUA_Achr9P04600_001	Banana	cytosol	59.26	67.13
GSMUA_Achr9P17980_001	Banana	cytosol	61.11	66.44
GSMUA_AchrUn_...	Banana	plastid	62.35	63.92
GSMUA_Achr8P21220_001	Banana	cytosol	65.43	62.35
Solyc05g052420.1.1	Tomato	cytosol	29.01	57.32
GSMUA_Achr10P...	Banana	cytosol, plastid	60.49	49.49
Zm00001d038436_P001	Maize	plastid	60.49	49.0
KRH49452	Soybean	plastid	53.7	48.88
KRH00319	Soybean	cytosol	52.47	48.02
TraesCS1B01G306800.1	Wheat	mitochondrion	56.79	47.42
GSMUA_Achr6P32790_001	Banana	cytosol	61.11	46.92
HORVU1Hr1G070420.1	Barley	mitochondrion	58.02	46.77
TraesCS1D01G293600.1	Wheat	mitochondrion, plastid	58.02	46.77
TraesCS1A01G297600.1	Wheat	mitochondrion	58.02	46.77
HORVU3Hr1G039010.1	Barley	plastid	59.26	46.6
HORVU3Hr1G088100.1	Barley	plastid	59.26	46.6
Os05t0473000-01	Rice	cytosol	62.35	46.54
TraesCS3A01G348400.1	Wheat	plastid	58.64	46.12
TraesCS3D01G342000.1	Wheat	plastid	58.02	45.63
EES19683	Sorghum	plastid	60.49	45.37
TraesCS3B01G380300.1	Wheat	mitochondrion, plastid	57.41	44.93
KRH76014	Soybean	cytosol	59.26	44.44
VIT_13s0067g01940.t01	Wine grape	plastid	58.02	44.34
PGSC0003DMT400028658	Potato	nucleus	56.79	43.19
Bra028758.1-P	Field mustard	cytosol	43.83	43.03
Solyc10g085310.1.1	Tomato	plastid	56.17	42.72
Solyc09g015380.1.1	Tomato	plastid	52.47	42.29
VIT_08s0058g00470.t01	Wine grape	plastid	58.64	41.85
GSMUA_Achr4P10630_001	Banana	mitochondrion	41.36	41.61
Solyc10g076410.1.1	Tomato	plastid	51.85	41.38
PGSC0003DMT400041080	Potato	mitochondrion	52.47	41.06
PGSC0003DMT400075056	Potato	plastid	53.7	40.65
CDX91449	Canola	plastid	51.85	40.58
Solyc03g095780.1.1	Tomato	plastid	50.0	40.3
Zm00001d043014_P001	Maize	cytosol	52.47	39.91
PGSC0003DMT400069734	Potato	mitochondrion, plastid	51.23	39.9
AT2G38310.1	Thale cress	plastid	50.62	39.61
CDY54453	Canola	plastid	50.62	39.42
PGSC0003DMT400053120	Potato	cytosol, plastid	48.77	39.3
PGSC0003DMT400053119	Potato	cytosol, plastid	48.77	39.3
PGSC0003DMT400053102	Potato	cytosol, plastid	48.77	39.3
CDY54415	Canola	cytosol	49.38	39.22
CDY18391	Canola	plastid	49.38	39.22
Bra017125.1-P	Field mustard	plastid	49.38	39.22
PGSC0003DMT400061535	Potato	plastid	52.47	38.99
KRH73249	Soybean	plastid	50.0	38.94
CDY07739	Canola	plastid	48.77	38.16
CDY14471	Canola	plastid	48.77	38.16
Bra000052.1-P	Field mustard	plastid	48.77	38.16
Bra017012.1-P	Field mustard	cytosol	48.15	38.05
CDY52923	Canola	cytosol	48.15	38.05
CDX93191	Canola	cytosol	47.53	37.93
CDX98844	Canola	cytosol	47.53	37.75
KRH14908	Soybean	plastid	50.62	37.61
CDY04951	Canola	cytosol	45.68	37.56
Os01t0827800-00	Rice	plastid	59.26	37.5
AT5G05440.1	Thale cress	cytosol	46.91	37.44
CDX70150	Canola	cytosol	46.91	37.25
Bra009113.1-P	Field mustard	cytosol	46.91	37.25
AT2G40330.1	Thale cress	cytosol	48.77	36.74
Bra005853.1-P	Field mustard	cytosol	45.68	36.45
CDX80959	Canola	cytosol	45.68	36.45
CDY72318	Canola	cytosol	45.68	36.45
Bra004967.1-P	Field mustard	mitochondrion	47.53	36.32
CDX74796	Canola	cytosol, nucleus, plastid	47.53	36.32
CDY24911	Canola	cytosol, mitochondrion	46.3	35.21
GSMUA_Achr7P09320_001	Banana	cytosol	40.12	34.95
Bra000184.1-P	Field mustard	cytosol, mitochondrion	45.06	34.43
CDY07608	Canola	cytosol, mitochondrion	45.06	34.43
CDY18867	Canola	cytosol, mitochondrion, nucleus, plastid	45.06	34.43
GSMUA_Achr6P00980_001	Banana	cytosol	40.12	33.33
Bra005115.1-P	Field mustard	plastid	30.25	32.89
GSMUA_Achr10P...	Banana	cytosol	39.51	32.49
GSMUA_Achr8P14780_001	Banana	cytosol	40.74	32.04
Solyc06g050500.2.1	Tomato	plastid	54.32	32.0
GSMUA_Achr4P19170_001	Banana	cytosol	38.27	31.96
GSMUA_Achr10P...	Banana	cytosol	36.42	31.72
KRH31193	Soybean	cytosol, golgi, plastid	50.0	31.52
GSMUA_Achr4P15170_001	Banana	cytosol	48.15	31.2
GSMUA_Achr10P...	Banana	cytosol	35.8	31.18
GSMUA_Achr2P19970_001	Banana	cytosol	35.8	31.18
GSMUA_AchrUn_...	Banana	cytosol	35.8	31.18
GSMUA_Achr4P08490_001	Banana	cytosol	37.04	30.15
OQU87775	Sorghum	endoplasmic reticulum, extracellular	50.0	29.78
Zm00001d012475_P001	Maize	cytosol	54.94	28.53
GSMUA_Achr8P19910_001	Banana	mitochondrion	35.19	27.27
GSMUA_Achr3P03480_001	Banana	cytosol	34.57	27.18
GSMUA_Achr4P15670_001	Banana	cytosol	30.25	26.2
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	36.42	25.88

Protein Annotations

EnsemblPlants:GSMUA_Achr5P29490_001	EnsemblPlants:GSMUA_Achr5T29490_001	EnsemblPlantsGene:GSMUA_Achr5G29490_001	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF3	PFAM:PF10604	SEG:seg	SUPFAM:SSF55961
UniParc:UPI000294D8FC	UniProt:M0T2S3	MapMan:11.1.2.1.1.1	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G29490_001]

Coordinates

chr5:-:29187598..29188221

Molecular Weight (calculated)

17421.6 Da

IEP (calculated)

7.378

GRAVY (calculated)

-0.204

Length

162 amino acids

Sequence
(BLAST)

001: MPHSSSKPSP PLHRIGGKPG STMTATVGAS VRCIGHGVPD VTSRHHEHAV GAHQCCSALV QHVAAPVATV WSVRLEILDD ERHVLSFRVV GGEHRLANYR
101: SVTSLHPEGD DGTVVVESYV VDVPAGNTRE DTRVFVDTIV RCNLHSLAGT VENLARCPRE TK

Best Arabidopsis Sequence Match ( AT5G05440.1 )
(BLAST)

001: MRSPVQLQHG SDATNGFHTL QPHDQTDGPI KRVCLTRGMH VPEHVAMHHT HDVGPDQCCS SVVQMIHAPP ESVWALVRRF DNPKVYKNFI RQCRIVQGDG
101: LHVGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TLSFVDTIVR CNLQSLARST
201: NRQ

Arabidopsis Description

PYL5Abscisic acid receptor PYL5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLB1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.