CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89350
KRH02667
KRH11184
KRH12454
KRH19237
KRH21069
KRH37441
KRH50394
KRH73525

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38310.1	KRH73525	AT3G11410.1	19407142
AT2G38310.1	KRG89350	AT4G18340.1	19407142
AT2G38310.1	KRH11184	AT4G18340.1	19407142
AT2G38310.1	KRH21069	AT4G18340.1	19407142
AT2G38310.1	KRH50394	AT4G18340.1	19407142
AT2G38310.1	KRH02667	AT4G26080.1	19407142
AT2G38310.1	KRH12454	AT4G26080.1	19407142
AT2G38310.1	KRH19237	AT4G26080.1	19407142
AT2G38310.1	KRH37441	AT4G26080.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00319	Soybean	cytosol	94.38	94.92
TraesCS4A01G114400.1	Wheat	cytosol	64.04	63.69
AT2G38310.1	Thale cress	plastid	71.35	61.35
Solyc09g015380.1.1	Tomato	plastid	69.1	61.19
KRH76014	Soybean	cytosol	74.16	61.11
CDX91449	Canola	plastid	70.79	60.87
Bra017125.1-P	Field mustard	plastid	69.1	60.29
CDY18391	Canola	plastid	69.1	60.29
CDY54415	Canola	cytosol	69.1	60.29
PGSC0003DMT400028658	Potato	nucleus	71.91	60.09
Bra005115.1-P	Field mustard	plastid	50.0	59.73
Solyc10g085310.1.1	Tomato	plastid	71.35	59.62
CDY54453	Canola	plastid	69.1	59.13
VIT_13s0067g01940.t01	Wine grape	plastid	70.22	58.96
CDY07739	Canola	plastid	68.54	58.94
Bra000052.1-P	Field mustard	plastid	68.54	58.94
CDY14471	Canola	plastid	67.98	58.45
PGSC0003DMT400075056	Potato	plastid	70.22	58.41
Solyc10g076410.1.1	Tomato	plastid	65.73	57.64
PGSC0003DMT400041080	Potato	mitochondrion	66.85	57.49
GSMUA_Achr9P04600_001	Banana	cytosol	46.07	57.34
GSMUA_Achr6P32790_001	Banana	cytosol	66.85	56.4
KRH73249	Soybean	plastid	65.73	56.25
TraesCS1B01G306800.1	Wheat	mitochondrion	60.67	55.67
TraesCS1A01G297600.1	Wheat	mitochondrion	61.8	54.73
Zm00001d038436_P001	Maize	plastid	61.24	54.5
HORVU1Hr1G070420.1	Barley	mitochondrion	61.24	54.23
TraesCS1D01G293600.1	Wheat	mitochondrion, plastid	61.24	54.23
GSMUA_Achr5P29490_001	Banana	plastid	48.88	53.7
KRH14908	Soybean	plastid	65.73	53.67
Zm00001d047705_P001	Maize	plastid	65.17	53.21
GSMUA_AchrUn_...	Banana	plastid	47.19	53.16
TraesCS2D01G087500.1	Wheat	plastid	63.48	52.8
EER92405	Sorghum	plastid	65.73	52.7
GSMUA_Achr11P...	Banana	cytosol, plastid	46.63	52.53
HORVU3Hr1G039010.1	Barley	plastid	60.67	52.43
HORVU3Hr1G088100.1	Barley	plastid	60.67	52.43
Zm00001d028793_P001	Maize	cytosol, mitochondrion, plastid	64.61	52.27
TraesCS2B01G105300.1	Wheat	plastid	63.48	52.07
GSMUA_Achr9P17980_001	Banana	cytosol	43.26	51.68
TraesCS3D01G342000.1	Wheat	plastid	59.55	51.46
TraesCS3A01G348400.1	Wheat	plastid	59.55	51.46
TraesCS3B01G380300.1	Wheat	mitochondrion, plastid	59.55	51.21
Os05t0473000-01	Rice	cytosol	62.36	51.15
EES19683	Sorghum	plastid	61.8	50.93
TraesCS4B01G189800.1	Wheat	cytosol	64.04	50.89
Os03t0297600-01	Rice	cytosol	65.17	50.66
HORVU4Hr1G055220.1	Barley	cytosol	63.48	50.45
TraesCS4D01G191200.1	Wheat	cytosol	63.48	50.45
KRH45453	Soybean	cytosol	57.87	48.58
Zm00001d043014_P001	Maize	cytosol	57.3	47.89
KRH75621	Soybean	cytosol	57.3	47.66
KRH47929	Soybean	cytosol	48.88	47.03
KRH31193	Soybean	cytosol, golgi, plastid	66.85	46.3
KRH52194	Soybean	cytosol	48.31	45.99
KRH61500	Soybean	cytosol	48.31	45.5
KRH21267	Soybean	cytosol	47.19	45.41
KRH11022	Soybean	cytosol	47.19	45.41
GSMUA_Achr8P21220_001	Banana	cytosol	43.26	45.29
KRH18155	Soybean	cytosol	48.31	45.03
KRH65845	Soybean	cytosol	48.31	44.56
KRH74424	Soybean	cytosol	54.49	43.89
KRH53449	Soybean	cytosol	46.63	43.46
KRH05492	Soybean	cytosol	45.51	43.09
KRH65286	Soybean	cytosol	21.91	42.86
Os01t0827800-00	Rice	plastid	61.24	42.58
GSMUA_Achr10P...	Banana	cytosol, plastid	46.63	41.92
TraesCS2A01G089400.1	Wheat	plastid	63.48	39.51
KRH06494	Soybean	cytosol, extracellular, vacuole	42.13	39.27
KRH15519	Soybean	cytosol	46.07	39.05
KRH16733	Soybean	cytosol	22.47	38.1
KRH39536	Soybean	plastid	54.49	36.47
OQU87775	Sorghum	endoplasmic reticulum, extracellular	55.62	36.4
Zm00001d012475_P001	Maize	cytosol	57.3	32.69

Protein Annotations

EMBL:ACUP02004364	EnsemblPlants:KRH49452	EnsemblPlantsGene:GLYMA_07G155500	EntrezGene:100792229	Gene3D:3.30.530.20	InterPro:IPR023393
InterPro:Polyketide_cyclase/dehydratase	InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF3	PFAM:PF10604	ProteinID:KRH49452
ProteinID:KRH49452.1	SEG:seg	SUPFAM:SSF55961	UniParc:UPI0002339071	UniProt:I1KKJ7	MapMan:11.1.2.1.1.1

Description

hypothetical protein

Coordinates

chr7:+:19114128..19115154

Molecular Weight (calculated)

19578.2 Da

IEP (calculated)

7.061

GRAVY (calculated)

-0.094

Length

178 amino acids

Sequence
(BLAST)

001: MSPNNPSTIV SDAVARHHTH VVSPHQCCSA VVQEIAAPVS TVWSVVRRFD NPQAYKHFVK SCHVILGDGD VGTLREVRVI SGLPAAVSTE RLDVLDDERH
101: VIGFSMVGGD HRLSNYRSVT ILHPRSATDT VVVESYVVDV PAGNTTEDTR VFVDTILRCN LQSLAKFAEN LTNKLHQR

Best Arabidopsis Sequence Match ( AT1G01360.1 )
(BLAST)

001: MMDGVEGGTA MYGGLETVQY VRTHHQHLCR ENQCTSALVK HIKAPLHLVW SLVRRFDQPQ KYKPFVSRCT VIGDPEIGSL REVNVKSGLP ATTSTERLEL
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ

Arabidopsis Description

PYL9RCAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4H4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.