CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39536	Soybean	plastid	93.67	77.82
KRH45453	Soybean	cytosol	68.33	71.23
KRH75621	Soybean	cytosol	68.78	71.03
GSMUA_Achr4P19170_001	Banana	cytosol	53.39	60.82
Zm00001d047037_P001	Maize	cytosol	55.2	59.51
GSMUA_Achr8P14780_001	Banana	cytosol	54.75	58.74
OQU92088	Sorghum	cytosol	56.11	58.49
TraesCS1A01G191700.1	Wheat	cytosol	55.66	58.29
Zm00001d030045_P001	Maize	cytosol	55.66	58.02
TraesCS1D01G195300.1	Wheat	cytosol	55.66	57.75
TraesCS1B01G206600.1	Wheat	cytosol, unclear	55.66	57.75
Os10t0573400-01	Rice	plasma membrane	54.75	57.08
KRH00319	Soybean	cytosol	45.25	56.5
KRH49452	Soybean	plastid	43.89	54.49
KRH52194	Soybean	cytosol	45.25	53.48
KRH61500	Soybean	cytosol	45.7	53.44
KRH05492	Soybean	cytosol	44.34	52.13
KRH15519	Soybean	cytosol	44.34	46.67
KRH73249	Soybean	plastid	43.89	46.63
KRH76014	Soybean	cytosol	44.8	45.83
HORVU1Hr1G050110.1	Barley	plastid	55.66	44.89
KRH47929	Soybean	cytosol	36.65	43.78
KRH14908	Soybean	plastid	42.99	43.58
KRH11022	Soybean	cytosol	36.2	43.24
KRH65845	Soybean	cytosol	37.1	42.49
KRH18155	Soybean	cytosol	36.65	42.41
KRH21267	Soybean	cytosol	35.29	42.16
KRH53449	Soybean	cytosol	36.2	41.88
KRH16733	Soybean	cytosol	19.0	40.0
KRH65286	Soybean	cytosol	16.29	39.56
KRH06494	Soybean	cytosol, extracellular, vacuole	33.48	38.74
KRH31193	Soybean	cytosol, golgi, plastid	42.99	36.97

Protein Annotations

EMBL:ACUP02000024	EnsemblPlants:KRH74424	EnsemblPlantsGene:GLYMA_01G018800	EntrezGene:100819216	Gene3D:3.30.530.20	InterPro:IPR023393
InterPro:Polyketide_cyclase/dehydratase	InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF6	PFAM:PF10604	ProteinID:KRH74424
ProteinID:KRH74424.1	SUPFAM:SSF55961	UniParc:UPI00023378E3	UniProt:I1J4W0	MapMan:11.1.2.1.1.1	:

Description

hypothetical protein

Coordinates

chr1:-:1803842..1805405

Molecular Weight (calculated)

24305.2 Da

IEP (calculated)

5.897

GRAVY (calculated)

-0.478

Length

221 amino acids

Sequence
(BLAST)

001: MEKAESSAST SEPDSDENHH RHPTNHHINP PSGLTPLEFA SLIPSVAEHH SYLVGSGQCS SLLAQRVQAP PDAVWSVVRR FDKPQTYKHF IKSCAVKEPF
101: HMAVGVTRDV NVISGLPAAT STERLDLLDD IRCVTGFSII GGEHRLRNYR SVTTVHSFED DADDGKIYTV VLESYVVDVP DGNTEEDTRL FADTVVKLNL
201: QKLASVTEGT NRDGDGKSHS R

Best Arabidopsis Sequence Match ( AT5G46790.1 )
(BLAST)

001: MANSESSSSP VNEEENSQRI STLHHQTMPS DLTQDEFTQL SQSIAEFHTY QLGNGRCSSL LAQRIHAPPE TVWSVVRRFD RPQIYKHFIK SCNVSEDFEM
101: RVGCTRDVNV ISGLPANTSR ERLDLLDDDR RVTGFSITGG EHRLRNYKSV TTVHRFEKEE EEERIWTVVL ESYVVDVPEG NSEEDTRLFA DTVIRLNLQK
201: LASITEAMNR NNNNNNSSQV R

Arabidopsis Description

PYL1Abscisic acid receptor PYL1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZS8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.