Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047037_P001 | Maize | cytosol | 89.15 | 92.2 |
| Zm00001d030045_P001 | Maize | cytosol | 91.98 | 91.98 |
| TraesCS1A01G191700.1 | Wheat | cytosol | 83.49 | 83.89 |
| TraesCS1D01G195300.1 | Wheat | cytosol | 83.96 | 83.57 |
| TraesCS1B01G206600.1 | Wheat | cytosol, unclear | 83.49 | 83.1 |
| Os10t0573400-01 | Rice | plasma membrane | 79.25 | 79.25 |
| GSMUA_Achr4P19170_001 | Banana | cytosol | 64.62 | 70.62 |
| GSMUA_Achr8P14780_001 | Banana | cytosol | 63.68 | 65.53 |
| HORVU1Hr1G050110.1 | Barley | plastid | 83.02 | 64.23 |
| AT4G17870.1 | Thale cress | cytosol | 52.83 | 58.64 |
| CDY70860 | Canola | cytosol | 50.94 | 58.06 |
| CDY01498 | Canola | cytosol | 51.89 | 57.59 |
| CDX90440 | Canola | cytosol | 51.89 | 57.59 |
| Bra012635.1-P | Field mustard | cytosol | 51.89 | 57.59 |
| Bra013262.1-P | Field mustard | cytosol | 51.42 | 57.07 |
| CDY69797 | Canola | cytosol | 51.42 | 57.07 |
| KRH74424 | Soybean | cytosol | 58.49 | 56.11 |
| CDY58505 | Canola | nucleus | 55.19 | 55.71 |
| Bra024995.1-P | Field mustard | nucleus | 55.19 | 55.71 |
| KRH45453 | Soybean | cytosol | 55.66 | 55.66 |
| Solyc06g061180.1.1 | Tomato | nucleus | 55.66 | 55.4 |
| KRH75621 | Soybean | cytosol | 55.66 | 55.14 |
| PGSC0003DMT400005378 | Potato | nucleus | 54.72 | 54.46 |
| CDX77691 | Canola | nucleus | 55.19 | 54.42 |
| Bra017526.1-P | Field mustard | nucleus | 46.7 | 54.1 |
| CDY03194 | Canola | nucleus | 48.58 | 53.93 |
| Bra021032.1-P | Field mustard | cytosol | 39.62 | 53.5 |
| CDY68316 | Canola | nucleus | 48.11 | 53.4 |
| AT5G46790.1 | Thale cress | nucleus | 55.66 | 53.39 |
| CDX76554 | Canola | cytosol | 38.68 | 52.9 |
| CDY08877 | Canola | cytosol | 38.21 | 52.26 |
| Solyc08g076960.1.1 | Tomato | extracellular | 56.6 | 51.95 |
| PGSC0003DMT400045156 | Potato | nucleus | 56.13 | 51.52 |
| EES06532 | Sorghum | cytosol | 46.7 | 48.53 |
| EER88529 | Sorghum | cytosol | 46.7 | 48.53 |
| KRH39536 | Soybean | plastid | 58.02 | 46.24 |
| EES19683 | Sorghum | plastid | 46.23 | 45.37 |
| VIT_02s0012g01270.t01 | Wine grape | cytosol | 55.66 | 44.7 |
| EES17886 | Sorghum | cytosol | 39.62 | 42.64 |
| EER92405 | Sorghum | plastid | 44.34 | 42.34 |
| EES04864 | Sorghum | cytosol | 37.74 | 37.91 |
| OQU87775 | Sorghum | endoplasmic reticulum, extracellular | 41.98 | 32.72 |
| VIT_04s0008g00270.t01 | Wine grape | cytosol | 28.77 | 21.03 |
| VIT_08s0058g00230.t01 | Wine grape | plastid | 27.36 | 18.01 |
| VIT_13s0175g00110.t01 | Wine grape | plastid | 6.13 | 12.26 |
Protein Annotations
| MapMan:11.1.2.1.1.1 | Gene3D:3.30.530.20 | UniProt:A0A1Z5S851 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009719 |
| GO:GO:0009738 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0042803 | GO:GO:1905183 | InterPro:IPR023393 |
| EnsemblPlants:OQU92088 | ProteinID:OQU92088 | ProteinID:OQU92088.1 | PFAM:PF10604 | PANTHER:PTHR31213 | PANTHER:PTHR31213:SF6 |
| InterPro:Polyketide_cyclase/dehydratase | EnsemblPlantsGene:SORBI_3001G289100 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | UniParc:UPI0001FCBD13 | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:-:56560201..56561506
Molecular Weight (calculated)
22785.8 Da
IEP (calculated)
4.707
GRAVY (calculated)
-0.152
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKQGAGGDV EVPAGLGLTA AEYEQLRSTV DAHHRYAVGE GQCSSLLAQR IQAPPAAVWA IVRRFDCPQV YKHFIRSCAL RPDPEAGDAL RPGRLREVSV
101: ISGLPASTST ERLDLLDDAA RVFGFSITGG EHRLRNYRSV TTVSELADPG ICTVVLESYV VDVPDGNTED DTRLFADTVI RLNLQKLKSV AEANAAAAAS
201: FVSVVPPPEP EE
101: ISGLPASTST ERLDLLDDAA RVFGFSITGG EHRLRNYRSV TTVSELADPG ICTVVLESYV VDVPDGNTED DTRLFADTVI RLNLQKLKSV AEANAAAAAS
201: FVSVVPPPEP EE
001: MANSESSSSP VNEEENSQRI STLHHQTMPS DLTQDEFTQL SQSIAEFHTY QLGNGRCSSL LAQRIHAPPE TVWSVVRRFD RPQIYKHFIK SCNVSEDFEM
101: RVGCTRDVNV ISGLPANTSR ERLDLLDDDR RVTGFSITGG EHRLRNYKSV TTVHRFEKEE EEERIWTVVL ESYVVDVPEG NSEEDTRLFA DTVIRLNLQK
201: LASITEAMNR NNNNNNSSQV R
101: RVGCTRDVNV ISGLPANTSR ERLDLLDDDR RVTGFSITGG EHRLRNYKSV TTVHRFEKEE EEERIWTVVL ESYVVDVPEG NSEEDTRLFA DTVIRLNLQK
201: LASITEAMNR NNNNNNSSQV R
Arabidopsis Description
PYL1Abscisic acid receptor PYL1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZS8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.