Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016105_P001 | Maize | cytosol | 95.73 | 95.28 |
| Os02t0255500-01 | Rice | cytosol | 90.05 | 93.14 |
| Zm00001d053396_P001 | Maize | cytosol | 94.31 | 91.71 |
| VIT_02s0025g01340.t01 | Wine grape | cytosol | 68.25 | 77.84 |
| GSMUA_Achr10P... | Banana | cytosol | 66.82 | 75.81 |
| PGSC0003DMT400012888 | Potato | cytosol | 63.51 | 75.71 |
| VIT_16s0050g02620.t01 | Wine grape | cytosol | 65.4 | 74.59 |
| KRH47929 | Soybean | cytosol | 64.93 | 74.05 |
| PGSC0003DMT400031686 | Potato | cytosol | 65.88 | 73.55 |
| Solyc08g082180.2.1 | Tomato | cytosol | 65.88 | 73.55 |
| Solyc12g055990.1.1 | Tomato | cytosol | 63.03 | 73.48 |
| GSMUA_Achr4P08490_001 | Banana | cytosol | 69.19 | 73.37 |
| GSMUA_Achr10P... | Banana | cytosol | 64.45 | 73.12 |
| KRH18155 | Soybean | cytosol | 65.88 | 72.77 |
| GSMUA_AchrUn_... | Banana | cytosol | 63.98 | 72.58 |
| AT1G01360.1 | Thale cress | cytosol | 63.98 | 72.19 |
| KRH65845 | Soybean | cytosol | 65.4 | 71.5 |
| Solyc03g007310.2.1 | Tomato | cytosol | 62.56 | 71.35 |
| CDY04688 | Canola | cytosol | 62.56 | 70.97 |
| Bra033267.1-P | Field mustard | cytosol | 62.56 | 70.97 |
| PGSC0003DMT400023511 | Potato | cytosol | 62.09 | 70.81 |
| Bra003077.1-P | Field mustard | cytosol | 61.61 | 70.65 |
| CDY49462 | Canola | cytosol | 61.61 | 70.65 |
| CDY15183 | Canola | cytosol | 62.56 | 70.59 |
| GSMUA_Achr2P19970_001 | Banana | cytosol | 62.09 | 70.43 |
| AT5G53160.2 | Thale cress | cytosol, nucleus, peroxisome | 62.56 | 70.21 |
| CDX90028 | Canola | cytosol | 62.56 | 70.21 |
| CDY61488 | Canola | cytosol | 60.66 | 69.57 |
| CDY64350 | Canola | cytosol | 60.19 | 69.4 |
| EES17886 | Sorghum | cytosol | 64.45 | 69.04 |
| CDX96197 | Canola | cytosol | 61.14 | 68.62 |
| GSMUA_Achr3P03480_001 | Banana | cytosol | 66.35 | 67.96 |
| CDY38728 | Canola | cytosol | 59.24 | 67.93 |
| Bra022634.1-P | Field mustard | cytosol | 60.19 | 67.55 |
| KRH53449 | Soybean | cytosol | 61.14 | 67.54 |
| Bra029093.1-P | Field mustard | cytosol | 58.77 | 67.39 |
| Solyc01g095700.2.1 | Tomato | cytosol | 59.24 | 67.2 |
| CDY27022 | Canola | cytosol | 59.72 | 67.02 |
| CDX74368 | Canola | cytosol | 60.66 | 66.32 |
| Bra000938.1-P | Field mustard | cytosol | 60.66 | 66.32 |
| CDY25052 | Canola | cytosol | 58.77 | 66.31 |
| PGSC0003DMT400000606 | Potato | cytosol | 58.29 | 66.13 |
| CDX91871 | Canola | cytosol | 59.72 | 65.28 |
| Bra003463.1-P | Field mustard | cytosol | 57.82 | 65.24 |
| CDY53905 | Canola | cytosol | 57.82 | 65.24 |
| VIT_15s0046g01050.t01 | Wine grape | cytosol | 59.24 | 65.1 |
| GSMUA_Achr8P19910_001 | Banana | mitochondrion | 63.03 | 63.64 |
| GSMUA_Achr4P15670_001 | Banana | cytosol | 55.92 | 63.1 |
| Bra026299.1-P | Field mustard | cytosol | 54.98 | 63.04 |
| AT4G27920.1 | Thale cress | cytosol | 54.5 | 62.84 |
| CDX89219 | Canola | cytosol | 54.98 | 62.7 |
| CDY70517 | Canola | cytosol | 54.5 | 62.16 |
| GSMUA_Achr2P15420_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 64.93 | 60.09 |
| CDY07165 | Canola | cytosol | 17.06 | 60.0 |
| KRH06494 | Soybean | cytosol, extracellular, vacuole | 53.55 | 59.16 |
| AT4G01026.1 | Thale cress | cytosol | 57.82 | 57.82 |
| KRH65286 | Soybean | cytosol | 23.7 | 54.95 |
| KRH16733 | Soybean | cytosol | 26.54 | 53.33 |
| EES19683 | Sorghum | plastid | 43.13 | 42.13 |
| EER88529 | Sorghum | cytosol | 37.91 | 39.22 |
| EER92405 | Sorghum | plastid | 41.23 | 39.19 |
| OQU92088 | Sorghum | cytosol | 37.91 | 37.74 |
| EES06532 | Sorghum | cytosol | 35.55 | 36.76 |
| OQU87775 | Sorghum | endoplasmic reticulum, extracellular | 39.34 | 30.51 |
Protein Annotations
| MapMan:11.1.2.1.1.1 | Gene3D:3.30.530.20 | EntrezGene:8078346 | UniProt:C5XZF6 | EnsemblPlants:EES04864 | ProteinID:EES04864 |
| ProteinID:EES04864.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009409 |
| GO:GO:0009414 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009791 | GO:GO:0009845 |
| GO:GO:0009987 | GO:GO:0010427 | GO:GO:0019538 | GO:GO:1905183 | InterPro:IPR023393 | PFAM:PF10604 |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF16 | InterPro:Polyketide_cyclase/dehydratase | EnsemblPlantsGene:SORBI_3004G113800 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf |
| unigene:Sbi.3302 | UniParc:UPI0001A852AD | RefSeq:XP_002451888.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr4:+:11405510..11410059
Molecular Weight (calculated)
23912.6 Da
IEP (calculated)
6.715
GRAVY (calculated)
-0.435
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEMDGGVGV VGGGQQTPAP RRWRLADELR CDLRAMETDY VRRFHRHEPR DHQCSSAVAK HIKAPVHLVW SLVRRFDQPQ LFKPFVSRCE MKGNIEIGSV
101: REVNVKSGLP ATRSTERLEL LDDNEHILSV KFVGGDHRLQ NYSSILTVHP EVIDGRPGTL VIESFVVDVP DGNTKDETCY FVEALLKCNL KSLAEVSERQ
201: VIKDQTEPLD R
101: REVNVKSGLP ATRSTERLEL LDDNEHILSV KFVGGDHRLQ NYSSILTVHP EVIDGRPGTL VIESFVVDVP DGNTKDETCY FVEALLKCNL KSLAEVSERQ
201: VIKDQTEPLD R
001: MEANGIENLT NPNQEREFIR RHHKHELVDN QCSSTLVKHI NAPVHIVWSL VRRFDQPQKY KPFISRCVVK GNMEIGTVRE VDVKSGLPAT RSTERLELLD
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV
Arabidopsis Description
PYL8RCAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UJN3]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.