Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc08g062650.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G27920.1 | Solyc08g062650.2.1 | AT1G72770.1 | 19407142 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400023511 | Potato | cytosol | 97.3 | 97.3 |
| VIT_16s0050g02620.t01 | Wine grape | cytosol | 85.41 | 85.41 |
| KRH65845 | Soybean | cytosol | 83.78 | 80.31 |
| KRH18155 | Soybean | cytosol | 82.7 | 80.1 |
| Solyc12g055990.1.1 | Tomato | cytosol | 77.3 | 79.01 |
| GSMUA_Achr10P... | Banana | cytosol | 78.92 | 78.49 |
| Solyc08g082180.2.1 | Tomato | cytosol | 79.46 | 77.78 |
| CDY49462 | Canola | cytosol | 77.3 | 77.72 |
| CDY61488 | Canola | cytosol | 77.3 | 77.72 |
| Bra003077.1-P | Field mustard | cytosol | 76.76 | 77.17 |
| CDY64350 | Canola | cytosol | 76.22 | 77.05 |
| CDY38728 | Canola | cytosol | 76.22 | 76.63 |
| CDX96197 | Canola | cytosol | 77.84 | 76.6 |
| AT5G53160.2 | Thale cress | cytosol, nucleus, peroxisome | 77.84 | 76.6 |
| Bra029093.1-P | Field mustard | cytosol | 75.68 | 76.09 |
| Bra022634.1-P | Field mustard | cytosol | 76.76 | 75.53 |
| GSMUA_Achr10P... | Banana | cytosol | 75.68 | 75.27 |
| GSMUA_Achr2P19970_001 | Banana | cytosol | 75.68 | 75.27 |
| CDY27022 | Canola | cytosol | 76.22 | 75.0 |
| Solyc01g095700.2.1 | Tomato | cytosol | 75.14 | 74.73 |
| GSMUA_AchrUn_... | Banana | cytosol | 75.14 | 74.73 |
| KRH53449 | Soybean | cytosol | 76.22 | 73.82 |
| HORVU0Hr1G032390.2 | Barley | cytosol, extracellular | 34.05 | 73.26 |
| CDY70517 | Canola | cytosol | 71.89 | 71.89 |
| Bra026299.1-P | Field mustard | cytosol | 71.35 | 71.74 |
| CDX89219 | Canola | cytosol | 71.35 | 71.35 |
| AT4G27920.1 | Thale cress | cytosol | 70.27 | 71.04 |
| GSMUA_Achr3P03480_001 | Banana | cytosol | 77.3 | 69.42 |
| TraesCS1A01G126800.1 | Wheat | cytosol | 74.05 | 66.83 |
| TraesCS1B01G145800.1 | Wheat | cytosol | 74.05 | 66.83 |
| TraesCS1D01G126900.1 | Wheat | cytosol | 74.05 | 66.83 |
| Os02t0255500-01 | Rice | cytosol | 73.51 | 66.67 |
| Os05t0213500-01 | Rice | cytosol, nucleus | 74.59 | 66.03 |
| Zm00001d037719_P001 | Maize | cytosol | 70.27 | 65.99 |
| Zm00001d010445_P001 | Maize | cytosol | 69.73 | 65.48 |
| EES17886 | Sorghum | cytosol | 69.73 | 65.48 |
| Zm00001d016105_P001 | Maize | cytosol | 73.51 | 64.15 |
| GSMUA_Achr8P19910_001 | Banana | mitochondrion | 71.89 | 63.64 |
| EES04864 | Sorghum | cytosol | 71.35 | 62.56 |
| GSMUA_Achr2P15420_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 76.22 | 61.84 |
| KRH65286 | Soybean | cytosol | 29.73 | 60.44 |
| Zm00001d053396_P001 | Maize | cytosol | 70.27 | 59.91 |
| KRH16733 | Soybean | cytosol | 33.51 | 59.05 |
| Os02t0255300-00 | Rice | cytosol, plastid | 55.68 | 57.22 |
| Zm00001d002533_P001 | Maize | cytosol | 38.92 | 57.14 |
| Os06t0528300-00 | Rice | cytosol | 60.0 | 53.88 |
| Os06t0527800-01 | Rice | cytosol | 58.92 | 52.91 |
| Solyc08g065410.1.1 | Tomato | cytosol | 41.62 | 52.74 |
| TraesCS7B01G232100.1 | Wheat | cytoskeleton, cytosol, nucleus | 55.14 | 52.31 |
| Os06t0526400-00 | Rice | cytosol | 54.05 | 51.02 |
| TraesCS7D01G328000.1 | Wheat | cytosol | 54.05 | 50.76 |
| HORVU7Hr1G079270.1 | Barley | cytosol | 54.05 | 50.76 |
| TraesCS7A01G350800.1 | Wheat | cytosol | 51.89 | 48.73 |
| HORVU1Hr1G030390.2 | Barley | extracellular, mitochondrion, plasma membrane | 74.05 | 47.08 |
| Solyc05g052420.1.1 | Tomato | cytosol | 20.54 | 46.34 |
| Solyc12g095970.1.1 | Tomato | cytosol | 47.57 | 46.32 |
| Solyc03g095780.1.1 | Tomato | plastid | 49.73 | 45.77 |
| Solyc10g076410.1.1 | Tomato | plastid | 49.73 | 45.32 |
| HORVU3Hr1G054230.1 | Barley | mitochondrion | 37.84 | 44.03 |
| Solyc09g015380.1.1 | Tomato | plastid | 45.41 | 41.79 |
| Solyc10g085310.1.1 | Tomato | plastid | 47.03 | 40.85 |
| Solyc06g061180.1.1 | Tomato | nucleus | 45.95 | 39.91 |
| Solyc08g076960.1.1 | Tomato | extracellular | 47.57 | 38.1 |
| Solyc02g076770.1.1 | Tomato | cytosol | 42.7 | 36.24 |
| Solyc06g050500.2.1 | Tomato | plastid | 50.27 | 33.82 |
| Os06t0526466-00 | Rice | cytosol, mitochondrion | 23.78 | 31.88 |
Protein Annotations
| EnsemblPlants:Solyc03g007310.2.1 | EnsemblPlantsGene:Solyc03g007310.2 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF12 | PFAM:PF10604 | SUPFAM:SSF55961 | UniParc:UPI0002767F73 | UniProt:K4BEF4 |
| MapMan:11.1.2.1.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:1873856..1877023
Molecular Weight (calculated)
20901.9 Da
IEP (calculated)
6.085
GRAVY (calculated)
-0.297
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MNANGFCGVE KEYIRKHHIH EPKENQCSSF LVKHIRAPVH LVWSLVRRFD QPQKYKPFIS RCIVQGDLGI GSLREVDVKS GLPATTSTER LELLDDEEHI
101: LSVRIVGGDH RLRNYSSVIS VHPEVIDGRP GTLVLESFVV DVPEGNTKDE TCYFVEALIN CNLKSLADVS ERLAVQDRTE PIDQV
101: LSVRIVGGDH RLRNYSSVIS VHPEVIDGRP GTLVLESFVV DVPEGNTKDE TCYFVEALIN CNLKSLADVS ERLAVQDRTE PIDQV
001: MEANGIENLT NPNQEREFIR RHHKHELVDN QCSSTLVKHI NAPVHIVWSL VRRFDQPQKY KPFISRCVVK GNMEIGTVRE VDVKSGLPAT RSTERLELLD
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV
Arabidopsis Description
PYL8RCAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UJN3]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.