Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400000606 | Potato | cytosol | 97.31 | 97.31 |
| Solyc03g007310.2.1 | Tomato | cytosol | 74.73 | 75.14 |
| Solyc12g055990.1.1 | Tomato | cytosol | 71.51 | 73.48 |
| VIT_15s0046g01050.t01 | Wine grape | cytosol | 74.19 | 71.88 |
| Solyc08g082180.2.1 | Tomato | cytosol | 71.51 | 70.37 |
| GSMUA_Achr10P... | Banana | cytosol | 69.89 | 69.89 |
| HORVU0Hr1G032390.2 | Barley | cytosol, extracellular | 31.72 | 68.6 |
| GSMUA_Achr10P... | Banana | cytosol | 68.28 | 68.28 |
| GSMUA_Achr2P19970_001 | Banana | cytosol | 67.74 | 67.74 |
| GSMUA_AchrUn_... | Banana | cytosol | 66.13 | 66.13 |
| Os05t0213500-01 | Rice | cytosol, nucleus | 70.97 | 63.16 |
| GSMUA_Achr3P03480_001 | Banana | cytosol | 69.35 | 62.62 |
| TraesCS1A01G126800.1 | Wheat | cytosol | 68.82 | 62.44 |
| TraesCS1B01G145800.1 | Wheat | cytosol | 68.82 | 62.44 |
| TraesCS1D01G126900.1 | Wheat | cytosol | 68.82 | 62.44 |
| Os02t0255500-01 | Rice | cytosol | 68.28 | 62.25 |
| EES17886 | Sorghum | cytosol | 65.59 | 61.93 |
| Zm00001d037719_P001 | Maize | cytosol | 65.05 | 61.42 |
| Zm00001d010445_P001 | Maize | cytosol | 64.52 | 60.91 |
| Zm00001d016105_P001 | Maize | cytosol | 68.28 | 59.91 |
| GSMUA_Achr8P19910_001 | Banana | mitochondrion | 66.67 | 59.33 |
| EES04864 | Sorghum | cytosol | 67.2 | 59.24 |
| Zm00001d053396_P001 | Maize | cytosol | 66.13 | 56.68 |
| Zm00001d002533_P001 | Maize | cytosol | 37.1 | 54.76 |
| GSMUA_Achr2P15420_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 66.13 | 53.95 |
| Os02t0255300-00 | Rice | cytosol, plastid | 51.08 | 52.78 |
| Solyc08g065410.1.1 | Tomato | cytosol | 40.32 | 51.37 |
| Os06t0528300-00 | Rice | cytosol | 54.84 | 49.51 |
| TraesCS7B01G232100.1 | Wheat | cytoskeleton, cytosol, nucleus | 51.61 | 49.23 |
| Os06t0527800-01 | Rice | cytosol | 54.3 | 49.03 |
| HORVU7Hr1G079270.1 | Barley | cytosol | 51.08 | 48.22 |
| TraesCS7D01G328000.1 | Wheat | cytosol | 51.08 | 48.22 |
| Solyc05g052420.1.1 | Tomato | cytosol | 20.97 | 47.56 |
| Os06t0526400-00 | Rice | cytosol | 50.0 | 47.45 |
| TraesCS7A01G350800.1 | Wheat | cytosol | 50.0 | 47.21 |
| Solyc03g095780.1.1 | Tomato | plastid | 48.92 | 45.27 |
| Solyc12g095970.1.1 | Tomato | cytosol | 45.7 | 44.74 |
| HORVU1Hr1G030390.2 | Barley | extracellular, mitochondrion, plasma membrane | 68.82 | 43.99 |
| Solyc10g076410.1.1 | Tomato | plastid | 46.77 | 42.86 |
| Solyc09g015380.1.1 | Tomato | plastid | 45.16 | 41.79 |
| HORVU3Hr1G054230.1 | Barley | mitochondrion | 35.48 | 41.51 |
| Solyc10g085310.1.1 | Tomato | plastid | 47.31 | 41.31 |
| Solyc06g061180.1.1 | Tomato | nucleus | 46.24 | 40.38 |
| Solyc08g076960.1.1 | Tomato | extracellular | 48.39 | 38.96 |
| Solyc02g076770.1.1 | Tomato | cytosol | 43.55 | 37.16 |
| Solyc06g050500.2.1 | Tomato | plastid | 48.39 | 32.73 |
| Os06t0526466-00 | Rice | cytosol, mitochondrion | 18.28 | 24.64 |
Protein Annotations
| EnsemblPlants:Solyc01g095700.2.1 | EnsemblPlantsGene:Solyc01g095700.2 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF27 | PFAM:PF10604 | SUPFAM:SSF55961 | UniParc:UPI0002769127 | UniProt:K4AZV9 |
| MapMan:11.1.2.1.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:86884420..86886849
Molecular Weight (calculated)
20818.9 Da
IEP (calculated)
6.392
GRAVY (calculated)
-0.269
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MESQFIERYH SHQPSEHQCS SSLVKHIKAP VDIVWSLVRR FDQPQKYKPF ISRCTVKGDL TIGSVREVNV KSGLPATTST ERLELLDDEE HILGIRIVGG
101: DHRLKNYSSV ITVHPETLDG RPGTLVIESF VVDVPEGNTK EETCYFVKAL INCNLKSLAD VSERMAMQGG VLPVSVNWSS SNQIEI
101: DHRLKNYSSV ITVHPETLDG RPGTLVIESF VVDVPEGNTK EETCYFVKAL INCNLKSLAD VSERMAMQGG VLPVSVNWSS SNQIEI
001: MEANGIENLT NPNQEREFIR RHHKHELVDN QCSSTLVKHI NAPVHIVWSL VRRFDQPQKY KPFISRCVVK GNMEIGTVRE VDVKSGLPAT RSTERLELLD
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV
Arabidopsis Description
PYL8RCAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UJN3]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.