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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
iPSORT:plastid
MultiLoc:mitochondrion
Predotar:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G080290.6
HORVU1Hr1G094840.9
HORVU3Hr1G050340.1
HORVU3Hr1G067360.1
HORVU3Hr1G067380.4
HORVU7Hr1G029040.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G01360.1 HORVU1Hr1G080290.6 AT1G72770.1 19407142
AT1G01360.1 HORVU1Hr1G094840.9 AT1G72770.1 19407142
AT1G01360.1 HORVU3Hr1G050340.1 AT1G72770.1 19407142
AT1G01360.1 HORVU3Hr1G067360.1 AT1G72770.1 19407142
AT1G01360.1 HORVU3Hr1G067380.4 AT1G72770.1 19407142
AT1G01360.1 HORVU7Hr1G029040.1 AT1G72770.1 19407142
AT1G01360.1 HORVU1Hr1G080290.6 AT1G72770.1 19407143
AT1G01360.1 HORVU1Hr1G094840.9 AT1G72770.1 19407143
AT1G01360.1 HORVU3Hr1G050340.1 AT1G72770.1 19407143
AT1G01360.1 HORVU3Hr1G067360.1 AT1G72770.1 19407143
AT1G01360.1 HORVU3Hr1G067380.4 AT1G72770.1 19407143
AT1G01360.1 HORVU7Hr1G029040.1 AT1G72770.1 19407143
AT4G01026.1 HORVU1Hr1G080290.6 AT1G72770.1 19407142
AT4G01026.1 HORVU1Hr1G094840.9 AT1G72770.1 19407142
AT4G01026.1 HORVU3Hr1G050340.1 AT1G72770.1 19407142
AT4G01026.1 HORVU3Hr1G067360.1 AT1G72770.1 19407142
AT4G01026.1 HORVU3Hr1G067380.4 AT1G72770.1 19407142
AT4G01026.1 HORVU7Hr1G029040.1 AT1G72770.1 19407142
AT4G27920.1 HORVU1Hr1G080290.6 AT1G72770.1 19407142
AT4G27920.1 HORVU1Hr1G094840.9 AT1G72770.1 19407142
AT4G27920.1 HORVU3Hr1G050340.1 AT1G72770.1 19407142
AT4G27920.1 HORVU3Hr1G067360.1 AT1G72770.1 19407142
AT4G27920.1 HORVU3Hr1G067380.4 AT1G72770.1 19407142
AT4G27920.1 HORVU7Hr1G029040.1 AT1G72770.1 19407142
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d002533_P001 Maize cytosol 37.11 46.83
TraesCS1A01G126800.1 Wheat cytosol 50.31 39.02
TraesCS1B01G145800.1 Wheat cytosol 50.31 39.02
TraesCS1D01G126900.1 Wheat cytosol 50.31 39.02
KRH47929 Soybean cytosol 45.28 38.92
Solyc08g082180.2.1 Tomato cytosol 45.91 38.62
PGSC0003DMT400012888 Potato cytosol 42.77 38.42
PGSC0003DMT400023511 Potato cytosol 44.65 38.38
Solyc12g055990.1.1 Tomato cytosol 43.4 38.12
PGSC0003DMT400031686 Potato cytosol 45.28 38.1
Solyc03g007310.2.1 Tomato cytosol 44.03 37.84
VIT_02s0025g01340.t01 Wine grape cytosol 44.03 37.84
Os05t0213500-01 Rice cytosol, nucleus 49.69 37.8
HORVU4Hr1G060110.1 Barley mitochondrion 23.27 37.76
CDY64350 Canola cytosol 43.4 37.7
AT1G01360.1 Thale cress cytosol 44.03 37.43
KRH65286 Soybean cytosol 21.38 37.36
VIT_16s0050g02620.t01 Wine grape cytosol 43.4 37.3
KRH16733 Soybean cytosol 24.53 37.14
Bra029093.1-P Field mustard cytosol 42.77 36.96
GSMUA_Achr4P15670_001 Banana cytosol 43.4 36.9
CDX96197 Canola cytosol 43.4 36.7
EES17886 Sorghum cytosol 45.28 36.55
CDY38728 Canola cytosol 42.14 36.41
CDY61488 Canola cytosol 42.14 36.41
CDY27022 Canola cytosol 42.77 36.17
Bra022634.1-P Field mustard cytosol 42.77 36.17
KRH18155 Soybean cytosol 43.4 36.13
Zm00001d037719_P001 Maize cytosol 44.65 36.04
Bra033267.1-P Field mustard cytosol 42.14 36.02
CDY53905 Canola cytosol 42.14 35.83
Bra003463.1-P Field mustard cytosol 42.14 35.83
CDY25052 Canola cytosol 42.14 35.83
CDY15183 Canola cytosol 42.14 35.83
KRH65845 Soybean cytosol 43.4 35.75
GSMUA_Achr4P08490_001 Banana cytosol 44.65 35.68
AT5G53160.2 Thale cress cytosol, nucleus, peroxisome 42.14 35.64
CDX90028 Canola cytosol 42.14 35.64
KRH53449 Soybean cytosol 42.77 35.6
Zm00001d010445_P001 Maize cytosol 44.03 35.53
CDY04688 Canola cytosol 41.51 35.48
PGSC0003DMT400000606 Potato cytosol 41.51 35.48
Solyc01g095700.2.1 Tomato cytosol 41.51 35.48
VIT_15s0046g01050.t01 Wine grape cytosol 42.77 35.42
Bra003077.1-P Field mustard cytosol 40.88 35.33
CDY49462 Canola cytosol 40.25 34.78
HORVU4Hr1G060100.1 Barley mitochondrion 21.38 34.69
KRH06494 Soybean cytosol, extracellular, vacuole 41.51 34.55
GSMUA_AchrUn_... Banana cytosol 40.25 34.41
GSMUA_Achr10P... Banana cytosol 40.25 34.41
GSMUA_Achr10P... Banana cytosol 40.25 34.41
CDX91871 Canola cytosol 41.51 34.2
Bra000938.1-P Field mustard cytosol 40.88 33.68
CDX74368 Canola cytosol 40.88 33.68
CDY70517 Canola cytosol 38.99 33.51
GSMUA_Achr2P19970_001 Banana cytosol 38.99 33.33
Bra026299.1-P Field mustard cytosol 38.36 33.15
CDX89219 Canola cytosol 38.36 32.97
HORVU3Hr1G030210.5 Barley plastid 23.9 32.76
AT4G27920.1 Thale cress cytosol 36.48 31.69
AT4G01026.1 Thale cress cytosol 41.51 31.28
GSMUA_Achr8P19910_001 Banana mitochondrion 40.88 31.1
HORVU3Hr1G040680.1 Barley plastid 22.01 30.43
GSMUA_Achr3P03480_001 Banana cytosol 38.99 30.1
HORVU7Hr1G088140.2 Barley cytosol 35.85 29.08
GSMUA_Achr2P15420_001 Banana cytosol, mitochondrion, nucleus, plastid 40.88 28.51
HORVU1Hr1G030390.2 Barley extracellular, mitochondrion, plasma membrane 50.31 27.49
HORVU7Hr1G079270.1 Barley cytosol 33.96 27.41
HORVU1Hr1G070420.1 Barley mitochondrion 32.7 25.87
HORVU3Hr1G088100.1 Barley plastid 33.33 25.73
HORVU3Hr1G039010.1 Barley plastid 33.33 25.73
HORVU4Hr1G055220.1 Barley cytosol 32.7 23.21
HORVU1Hr1G050110.1 Barley plastid 30.19 17.52
HORVU0Hr1G032390.2 Barley cytosol, extracellular 9.43 17.44
HORVU3Hr1G107030.1 Barley mitochondrion 28.3 15.57
CDY07165 Canola cytosol 5.03 13.33
Protein Annotations
EnsemblPlants:HORVU3Hr1G054230.1EnsemblPlantsGene:HORVU3Hr1G054230Gene3D:3.30.530.20InterPro:IPR023393InterPro:Polyketide_cyclase/dehydrataseInterPro:START-like_dom_sf
PANTHER:PTHR31213PANTHER:PTHR31213:SF4PFAM:PF10604SUPFAM:SSF55961UniParc:UPI000B48826BUniProt:A0A287L3C7
MapMan:11.1.2.1.1.1:::::
Description
No Description!
Coordinates
chrchr3H:+:401536741..401537359
Molecular Weight (calculated)
17757.3 Da
IEP (calculated)
11.800
GRAVY (calculated)
-0.714
Length
159 amino acids
Sequence
(BLAST)
001: MAARPRARRE PVHLRTRQAH QGPVHLVWSL VRSFDQPQWY KLFVNRFVVR GGDLEIGSVR GVNVKTGLQA KTSTERLEQL DDDEHILSVK FFGGDHRLRT
101: QGEMSVSPGE AAGEATPLPE IKRPVPSRSP GRAATTRPGG ASGYWPMPAT RRMTGRRPQ
Best Arabidopsis Sequence Match ( AT4G01026.1 )
(BLAST)
001: MEMIGGDDTD TEMYGALVTA QSLRLRHLHH CRENQCTSVL VKYIQAPVHL VWSLVRRFDQ PQKYKPFISR CTVNGDPEIG CLREVNVKSG LPATTSTERL
101: EQLDDEEHIL GINIIGGDHR LKNYSSILTV HPEMIDGRSG TMVMESFVVD VPQGNTKDDT CYFVESLIKC NLKSLACVSE RLAAQDITNS IATFCNASNG
201: YREKNHTETN L
Arabidopsis Description
PYL7RCAR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UTD1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.