Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G249000.1 | Wheat | cytosol | 96.74 | 84.46 |
| TraesCS3D01G249000.1 | Wheat | cytosol | 94.96 | 84.43 |
| TraesCS3B01G277900.1 | Wheat | cytosol | 94.96 | 76.74 |
| HORVU3Hr1G067360.1 | Barley | cytosol, peroxisome | 11.28 | 74.51 |
| OQU87413 | Sorghum | cytosol | 68.25 | 60.05 |
| HORVU1Hr1G080290.6 | Barley | cytosol | 68.25 | 59.9 |
| HORVU7Hr1G029040.1 | Barley | cytosol, peroxisome | 47.77 | 54.95 |
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 14.54 | 54.44 |
| Solyc08g062640.2.1 | Tomato | cytosol | 21.07 | 52.99 |
| Bra016595.1-P | Field mustard | cytosol | 54.9 | 45.12 |
| CDX96761 | Canola | cytosol | 46.29 | 44.57 |
| HORVU1Hr1G094840.9 | Barley | extracellular, mitochondrion | 54.9 | 44.26 |
| CDX83901 | Canola | cytosol | 45.7 | 44.0 |
| HORVU3Hr1G050340.1 | Barley | plasma membrane, vacuole | 58.75 | 41.51 |
| HORVU7Hr1G008370.1 | Barley | cytosol, peroxisome | 12.46 | 40.0 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 55.49 | 36.81 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 50.45 | 35.79 |
| VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 57.86 | 35.58 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 50.74 | 35.33 |
| Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 50.74 | 35.33 |
| VIT_04s0008g01420.t01 | Wine grape | cytosol | 57.57 | 35.21 |
| CDY26234 | Canola | cytosol | 51.63 | 35.08 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 55.79 | 35.07 |
| PGSC0003DMT400006608 | Potato | plastid | 56.38 | 34.86 |
| Bra025964.1-P | Field mustard | cytosol | 52.52 | 34.84 |
| HORVU3Hr1G059170.2 | Barley | cytosol, nucleus | 41.25 | 34.84 |
| CDY48313 | Canola | cytosol | 51.63 | 34.73 |
| AT1G17550.1 | Thale cress | cytosol | 52.52 | 34.64 |
| AT1G72770.1 | Thale cress | cytosol | 51.63 | 34.05 |
| KRH52222 | Soybean | cytosol | 54.6 | 33.82 |
| KRH61549 | Soybean | cytosol | 54.6 | 33.82 |
| KRH05300 | Soybean | cytosol | 55.79 | 33.69 |
| HORVU1Hr1G090360.2 | Barley | cytosol, mitochondrion, nucleus | 39.17 | 33.42 |
| HORVU3Hr1G085930.3 | Barley | nucleus, plastid | 38.87 | 33.33 |
| KRH15739 | Soybean | cytosol | 54.9 | 33.21 |
| HORVU7Hr1G008470.2 | Barley | cytosol | 35.61 | 32.26 |
| HORVU4Hr1G060370.1 | Barley | nucleus | 37.98 | 32.0 |
| HORVU7Hr1G008520.2 | Barley | cytosol | 15.13 | 30.72 |
| Solyc08g062650.2.1 | Tomato | extracellular | 40.95 | 29.42 |
| HORVU2Hr1G000090.2 | Barley | cytosol | 38.28 | 28.41 |
| HORVU7Hr1G008560.2 | Barley | mitochondrion | 18.99 | 26.34 |
| HORVU7Hr1G008550.1 | Barley | cytosol | 16.91 | 25.22 |
| HORVU7Hr1G093200.5 | Barley | endoplasmic reticulum, plastid | 26.41 | 8.08 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | UniProt:A0A287LGC6 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0043169 | GO:GO:0046872 | EnsemblPlantsGene:HORVU3Hr1G067380 | EnsemblPlants:HORVU3Hr1G067380.4 | InterPro:IPR001932 | InterPro:IPR036457 |
| PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 |
| PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF517 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI000B46F864 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:511676352..511679778
Molecular Weight (calculated)
36208.2 Da
IEP (calculated)
5.522
GRAVY (calculated)
-0.190
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MECVPLWGCA AARGRAAEME DACAAVPRFA ALPARMLASS RELDGIGGDF DAAELRLPAH LFGVYDGHGG SEVANYCRDK IHVVLREVLR DGRGLEELGE
101: VGEVDVKESW EKVFGDCFQK VDDEVSGKAI RFSNGVTELR PEPIAADNVG STAVVAIVCS SHVITANCGD SRVVLCRGKE PIALSVDHKP DGKDERARIE
201: AAGGKVIDWN GYRVSGILAM SRSIGDRYLK PFLIPKPEVS VVPRAKDDDC LILASDGLWD VMSNEDACKV ARRQILLWYK NNNDGANSDG GSEPTMNPAA
301: KAAADCLVRL ALMKGSGDNI SVIVIDLKSR KKPKGKS
101: VGEVDVKESW EKVFGDCFQK VDDEVSGKAI RFSNGVTELR PEPIAADNVG STAVVAIVCS SHVITANCGD SRVVLCRGKE PIALSVDHKP DGKDERARIE
201: AAGGKVIDWN GYRVSGILAM SRSIGDRYLK PFLIPKPEVS VVPRAKDDDC LILASDGLWD VMSNEDACKV ARRQILLWYK NNNDGANSDG GSEPTMNPAA
301: KAAADCLVRL ALMKGSGDNI SVIVIDLKSR KKPKGKS
001: MEEISPAVAL TLGLANTMCD SGISSTFDIS ELENVTDAAD MLCNQKRQRY SNGVVDCIMG SVSEEKTLSE VRSLSSDFSV TVQESEEDEP LVSDATIISE
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
Arabidopsis Description
HAB2Protein phosphatase 2C 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNP9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.