Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3D01G249000.1 | Wheat | cytosol | 95.34 | 97.1 |
HORVU3Hr1G067380.4 | Barley | cytosol | 84.46 | 96.74 |
TraesCS3B01G277900.1 | Wheat | cytosol | 96.89 | 89.69 |
TraesCS1A01G358600.1 | Wheat | cytosol | 64.51 | 65.53 |
OQU87413 | Sorghum | cytosol | 63.21 | 63.71 |
PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 12.69 | 54.44 |
Solyc08g062640.2.1 | Tomato | cytosol | 18.65 | 53.73 |
CDX96761 | Canola | cytosol | 42.49 | 46.86 |
TraesCS1A01G441200.1 | Wheat | cytosol | 50.0 | 46.84 |
Bra016595.1-P | Field mustard | cytosol | 49.74 | 46.83 |
CDX83901 | Canola | cytosol | 42.23 | 46.57 |
TraesCS3A01G209200.1 | Wheat | peroxisome, plasma membrane, vacuole | 53.11 | 42.8 |
TraesCS5A01G183600.1 | Wheat | peroxisome | 34.97 | 38.68 |
CDX72943 | Canola | cytosol, peroxisome, plastid | 47.15 | 38.32 |
Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 50.0 | 37.99 |
CDX96432 | Canola | cytosol, peroxisome, plastid | 47.41 | 37.81 |
Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 47.41 | 37.81 |
VIT_04s0008g01420.t01 | Wine grape | cytosol | 53.11 | 37.21 |
VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 52.33 | 36.86 |
PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 51.04 | 36.75 |
CDY26234 | Canola | cytosol | 47.15 | 36.69 |
Bra025964.1-P | Field mustard | cytosol | 47.93 | 36.42 |
AT1G72770.1 | Thale cress | cytosol | 48.19 | 36.4 |
PGSC0003DMT400006608 | Potato | plastid | 51.3 | 36.33 |
CDY48313 | Canola | cytosol | 47.15 | 36.33 |
KRH52222 | Soybean | cytosol | 50.52 | 35.85 |
KRH05300 | Soybean | cytosol | 51.81 | 35.84 |
AT1G17550.1 | Thale cress | cytosol | 47.41 | 35.81 |
TraesCS3A01G237800.1 | Wheat | plastid | 36.53 | 35.79 |
KRH61549 | Soybean | cytosol | 50.26 | 35.66 |
KRH15739 | Soybean | cytosol | 50.52 | 35.01 |
TraesCS1A01G411200.1 | Wheat | nucleus | 34.46 | 34.82 |
TraesCS7A01G047900.1 | Wheat | cytosol, mitochondrion, peroxisome | 9.84 | 34.23 |
TraesCS3A01G362200.1 | Wheat | nucleus, plastid | 34.46 | 34.02 |
TraesCS7A01G048200.1 | Wheat | plastid | 32.12 | 33.88 |
TraesCS4A01G443400.1 | Wheat | mitochondrion | 32.12 | 33.79 |
TraesCS4A01G443500.1 | Wheat | mitochondrion | 32.12 | 33.79 |
TraesCS2A01G000400.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 36.53 | 32.41 |
TraesCS4A01G094300.1 | Wheat | nucleus | 34.2 | 32.27 |
Solyc08g062650.2.1 | Tomato | extracellular | 38.08 | 31.34 |
TraesCS3A01G144400.1 | Wheat | peroxisome | 21.24 | 26.8 |
TraesCS7A01G395000.1 | Wheat | plasma membrane, vacuole | 23.83 | 8.62 |
Protein Annotations
KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | InterPro:IPR001932 |
InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom |
ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF517 | SMART:SM00332 | SUPFAM:SSF81606 |
EnsemblPlantsGene:TraesCS3A01G249000 | EnsemblPlants:TraesCS3A01G249000.1 | TIGR:cd00143 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3A:-:467153476..467156072
Molecular Weight (calculated)
40961.9 Da
IEP (calculated)
6.370
GRAVY (calculated)
-0.173
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAVFAGEG TAARGGCSAE CAGGIERPPD LGSRARAAGD GCAKRSVYLM ECVPLWGCAA ARGRAAEMED ACAAVPRFAA LPARMLASSR ELDGIGGDFD
101: AAELRLPAHL FGVYDGHGGS EVANYCRDKI HVVLREVLKA GRGLEELGEV GEVDVKEPWE KVFGDCFQKV DEEVSGKAIR FSNGATELRP EPIAADNVGS
201: TAVVAIVCSS HVITANCGDS RVVLCRGKEP IALSVDHKPD RKDERARIEA AGGKVIDWNG YRVSGILAMS RSIGDRYLKP FLIPKPEVSI VARAKDDDCL
301: ILASDGLWDV MSNEDACKVA RRQILLWYKN NNDGANSDGG SEPTMNPAAK AAADCLVRLA LSKGSGDNIS VIVIDLKSRK KTKGKT
101: AAELRLPAHL FGVYDGHGGS EVANYCRDKI HVVLREVLKA GRGLEELGEV GEVDVKEPWE KVFGDCFQKV DEEVSGKAIR FSNGATELRP EPIAADNVGS
201: TAVVAIVCSS HVITANCGDS RVVLCRGKEP IALSVDHKPD RKDERARIEA AGGKVIDWNG YRVSGILAMS RSIGDRYLKP FLIPKPEVSI VARAKDDDCL
301: ILASDGLWDV MSNEDACKVA RRQILLWYKN NNDGANSDGG SEPTMNPAAK AAADCLVRLA LSKGSGDNIS VIVIDLKSRK KTKGKT
001: MEEISPAVAL TLGLANTMCD SGISSTFDIS ELENVTDAAD MLCNQKRQRY SNGVVDCIMG SVSEEKTLSE VRSLSSDFSV TVQESEEDEP LVSDATIISE
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
Arabidopsis Description
HAB2Protein phosphatase 2C 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNP9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.