Factsheet for TraesCS2A01G000400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G023600.1	Wheat	cytosol	89.43	84.57
TraesCS2D01G000300.1	Wheat	cytosol	85.29	81.72
Os04t0167875-00	Rice	nucleus, peroxisome, plastid	15.17	76.74
HORVU2Hr1G000090.2	Barley	cytosol	76.78	73.57
GSMUA_Achr11P...	Banana	cytosol	34.94	60.08
GSMUA_Achr8P14370_001	Banana	cytosol	36.55	54.08
TraesCS7A01G047900.1	Wheat	cytosol, mitochondrion, peroxisome	13.56	53.15
Zm00001d025055_P001	Maize	cytosol	54.25	50.86
EES11811	Sorghum	plastid	55.86	49.69
PGSC0003DMT400019552	Potato	cytosol, peroxisome, plastid	11.95	48.6
TraesCS4A01G443500.1	Wheat	mitochondrion	38.85	46.05
TraesCS4A01G443400.1	Wheat	mitochondrion	38.85	46.05
TraesCS7A01G048200.1	Wheat	plastid	38.39	45.63
TraesCS5A01G183600.1	Wheat	peroxisome	35.86	44.7
GSMUA_Achr11P...	Banana	cytosol	41.61	44.69
PGSC0003DMT400090149	Potato	cytosol	33.33	43.67
PGSC0003DMT400091100	Potato	cytosol, nucleus, plastid	33.56	42.69
VIT_16s0022g02210.t01	Wine grape	nucleus	36.32	42.25
TraesCS3A01G362200.1	Wheat	nucleus, plastid	37.7	41.94
Zm00001d004357_P001	Maize	nucleus	52.41	41.91
TraesCS1A01G411200.1	Wheat	nucleus	36.55	41.62
Solyc03g006930.1.1	Tomato	cytosol	31.49	41.39
Solyc03g006950.1.1	Tomato	cytosol, nucleus, peroxisome	32.41	40.63
TraesCS4A01G094300.1	Wheat	nucleus	38.16	40.59
Solyc03g006940.1.1	Tomato	nucleus	32.18	40.58
CDY38877	Canola	cytosol	37.47	40.15
TraesCS3A01G237800.1	Wheat	plastid	36.32	40.1
Solyc03g006960.2.1	Tomato	nucleus	34.02	39.36
CDY32620	Canola	cytosol	35.17	39.13
Bra029160.1-P	Field mustard	cytosol	37.47	39.0
AT5G51760.1	Thale cress	cytosol	37.24	38.94
TraesCS3A01G249000.1	Wheat	cytosol	32.41	36.53
TraesCS1A01G358600.1	Wheat	cytosol	31.49	36.05
TraesCS1A01G441200.1	Wheat	cytosol	29.66	31.31
TraesCS3A01G209200.1	Wheat	peroxisome, plasma membrane, vacuole	31.72	28.81
TraesCS3A01G144400.1	Wheat	peroxisome	18.85	26.8
TraesCS7A01G395000.1	Wheat	plasma membrane, vacuole	18.62	7.59

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF391	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606
EnsemblPlantsGene:TraesCS2A01G000400	EnsemblPlants:TraesCS2A01G000400.1	TIGR:cd00143	SEG:seg	:	:

Description

No Description!

Coordinates

chr2A:+:278935..288840

Molecular Weight (calculated)

45450.5 Da

IEP (calculated)

6.141

GRAVY (calculated)

-0.215

Length

435 amino acids

Sequence
(BLAST)

001: MVMASAGVNN MPSHQMGEGH IDSEECRLRR RRRSRLNAHH ASSAPAPGPA EEGEVVQSPP PSSDSSSESA PSSQSAAEEG SDAVVAAAPQ QLPSSKEKEK
101: RWPVSFGSVA LAGRLREMED TVSLHPSFCA WADGSPMHLF AVFDGHGGPH AAALCREQMH VILAEEMAGA AAAFNNRQQS EEQPAEASAS SEQVAWRGAL
201: SRSFARADAL AVSACACGRG STASVPKSCS CLLSSAQKGA IVGSTAVVAL LVRDRLIVAN CGDSRAVLSR GGVAVPLSQD HKPDRPDEMA RIKAAGGKVM
301: YMNGARVRGI LAMSRALGHR LLKPEVICEP EISITERCED DDCLILASDG LWDVISNKVA CDVARQCLED GSPTRAPAAA GSSEATPSSS GSAPAVSQEE
401: EPRCFRAAAL LARLALGRES SDNISVVVVD LKARG

Best Arabidopsis Sequence Match ( AT5G51760.1 )
(BLAST)

001: MTEIYRTIST GRGDDVSPTK CRERRRRRIE MRRQAAVFGE PSSSRNRDRT DMEVYSSFDV PLRKQARRSE IGGLPADIGG FLAPPAASSC QKSEAPVWKG
101: EETEDEPLYG IVSVMGRSRK MEDSVTVKPN LCKPEVNRQR PVHFFAVYDG HGGSQVSTLC STTMHTFVKE ELEQNLEEEE EGSENDVVER KWRGVMKRSF
201: KRMDEMATST CVCGTSVPLC NCDPREAAIS GSTAVTAVLT HDHIIVANTG DSRAVLCRNG MAIPLSNDHK PDRPDERARI EAAGGRVLVV DGARVEGILA
301: TSRAIGDRYL KPMVAWEPEV TFMRRESGDE CLVLASDGLW DVLSSQLACD IARFCLREET PSSLDLNRMA QEDDNDGEQN PSRSVLAATL LTRLALGRQS
401: SDNISVVVID LKNSSQ

Arabidopsis Description

AHG1Probable protein phosphatase 2C 75 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLI3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.