Factsheet for VIT_16s0022g02210.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	36.36	53.75
GSMUA_Achr8P14370_001	Banana	cytosol	39.3	50.0
PGSC0003DMT400091100	Potato	cytosol, nucleus, plastid	40.11	43.86
HORVU7Hr1G008370.1	Barley	cytosol, peroxisome	12.3	43.81
Solyc03g006930.1.1	Tomato	cytosol	37.43	42.3
VIT_06s0004g05460.t01	Wine grape	nucleus	42.25	40.2
Os04t0167875-00	Rice	nucleus, peroxisome, plastid	9.09	39.53
VIT_13s0019g02200.t01	Wine grape	plastid	40.91	38.25
GSMUA_Achr11P...	Banana	cytosol	40.91	37.78
HORVU7Hr1G008520.2	Barley	cytosol	16.58	37.35
TraesCS7D01G042600.1	Wheat	cytosol	33.42	36.44
TraesCS2A01G000400.1	Wheat	cytosol, nucleus, peroxisome, plastid	42.25	36.32
HORVU7Hr1G008470.2	Barley	cytosol	36.1	36.29
VIT_11s0016g03180.t01	Wine grape	nucleus	38.24	36.11
HORVU2Hr1G000090.2	Barley	cytosol	43.32	35.68
VIT_16s0050g02680.t01	Wine grape	nucleus	27.81	35.25
TraesCS2D01G000300.1	Wheat	cytosol	42.78	35.24
TraesCS2B01G023600.1	Wheat	cytosol	43.05	35.0
TraesCS7D01G042300.1	Wheat	cytosol	33.96	34.32
Zm00001d025055_P001	Maize	cytosol	42.51	34.27
TraesCS4A01G443500.1	Wheat	mitochondrion	33.42	34.06
TraesCS4A01G443400.1	Wheat	mitochondrion	33.42	34.06
TraesCS7A01G048200.1	Wheat	plastid	32.62	33.33
VIT_09s0002g03530.t01	Wine grape	nucleus	32.35	32.53
EES11811	Sorghum	plastid	42.51	32.52
VIT_09s0002g03600.t01	Wine grape	nucleus	30.75	31.86
VIT_02s0025g01390.t01	Wine grape	cytosol, nucleus, plastid	33.16	31.55
VIT_02s0025g01550.t01	Wine grape	cytosol, nucleus, peroxisome	27.54	31.12
HORVU7Hr1G008550.1	Barley	cytosol	18.18	30.09
HORVU7Hr1G008560.2	Barley	mitochondrion	19.25	29.63
Zm00001d004357_P001	Maize	nucleus	41.18	28.31
VIT_11s0016g01780.t01	Wine grape	plastid	37.7	26.96
VIT_04s0008g01420.t01	Wine grape	cytosol	39.57	26.86
VIT_09s0002g01850.t01	Wine grape	cytosol, peroxisome, plastid	38.24	26.09
VIT_00s0179g00110.t01	Wine grape	vacuole	21.93	22.47
VIT_00s0179g00140.t01	Wine grape	vacuole	20.59	16.24

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100242943	wikigene:100242943	MapMan:18.4.24.2.1	Gene3D:3.60.40.10
EMBL:AM424561	ProteinID:CAN73343	ProteinID:CAN73343.1	ProteinID:CBI24479	ProteinID:CBI24479.3	UniProt:D7T1U9
EMBL:FN595506	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009737
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932
InterPro:IPR036457	EntrezGene:LOC100242943	wikigene:LOC100242943	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF537
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00015CBD13	ArrayExpress:VIT_16s0022g02210	EnsemblPlantsGene:VIT_16s0022g02210	EnsemblPlants:VIT_16s0022g02210.t01
RefSeq:XP_002271035	RefSeq:XP_002271035.2	RefSeq:XP_010662350.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr16:+:14705029..14709730

Molecular Weight (calculated)

40552.8 Da

IEP (calculated)

4.626

GRAVY (calculated)

-0.354

Length

374 amino acids

Sequence
(BLAST)

001: MSARESGGGN SNFTVEGNQN LAEEEGSNPA PSATSSGDDT ESSLSILTAP SEAPPPEPVF GMMTVSGRMQ EMEDAVSVQT NLCRPEINRG LPVHFFGVYD
101: GHGGSHVANL CREMMHLILE QELMSVDNTQ EGAHGGEPGG KEIENKEGWT RALKRCFQRM DEVVLNSCLC RNDWRQCSCR GIMEVEMTGT TAVVAIITTD
201: HIVVANCGDS RGVLCREGTA IPLSFDHKPD RSDELARIKS SGGRVIIMNG ARVEGMLGMS RAIGDRYLKP FITSEPEITF TKREAGDECL ILASDGLWDV
301: LPNEVACGVA SGCLRRESHA TTENLKSEDW KESESTGQFY PNHTTQAAAL LTRLALGRQS LDNISVVVVD LQRS

Best Arabidopsis Sequence Match ( AT5G51760.1 )
(BLAST)

001: MTEIYRTIST GRGDDVSPTK CRERRRRRIE MRRQAAVFGE PSSSRNRDRT DMEVYSSFDV PLRKQARRSE IGGLPADIGG FLAPPAASSC QKSEAPVWKG
101: EETEDEPLYG IVSVMGRSRK MEDSVTVKPN LCKPEVNRQR PVHFFAVYDG HGGSQVSTLC STTMHTFVKE ELEQNLEEEE EGSENDVVER KWRGVMKRSF
201: KRMDEMATST CVCGTSVPLC NCDPREAAIS GSTAVTAVLT HDHIIVANTG DSRAVLCRNG MAIPLSNDHK PDRPDERARI EAAGGRVLVV DGARVEGILA
301: TSRAIGDRYL KPMVAWEPEV TFMRRESGDE CLVLASDGLW DVLSSQLACD IARFCLREET PSSLDLNRMA QEDDNDGEQN PSRSVLAATL LTRLALGRQS
401: SDNISVVVID LKNSSQ

Arabidopsis Description

AHG1Probable protein phosphatase 2C 75 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLI3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.