CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025055_P001	Maize	cytosol	70.14	73.92
Zm00001d004357_P001	Maize	nucleus	67.48	60.66
TraesCS2A01G000400.1	Wheat	cytosol, nucleus, peroxisome, plastid	49.69	55.86
GSMUA_Achr11P...	Banana	cytosol	28.83	55.73
TraesCS2B01G023600.1	Wheat	cytosol	51.33	54.57
TraesCS2D01G000300.1	Wheat	cytosol	50.1	53.96
GSMUA_Achr8P14370_001	Banana	cytosol	31.7	52.72
HORVU2Hr1G000090.2	Barley	cytosol	48.67	52.42
KXG35986	Sorghum	cytosol, peroxisome, plastid	21.47	51.72
Os04t0167875-00	Rice	nucleus, peroxisome, plastid	9.0	51.16
PGSC0003DMT400090149	Potato	cytosol	32.11	47.29
EER96576	Sorghum	cytosol	34.36	47.06
PGSC0003DMT400019552	Potato	cytosol, peroxisome, plastid	10.22	46.73
HORVU7Hr1G008520.2	Barley	cytosol	15.75	46.39
PGSC0003DMT400091100	Potato	cytosol, nucleus, plastid	31.7	45.32
TraesCS7D01G042600.1	Wheat	cytosol	31.08	44.31
Solyc03g006930.1.1	Tomato	cytosol	29.86	44.11
Solyc03g006940.1.1	Tomato	nucleus	31.08	44.06
TraesCS7D01G042300.1	Wheat	cytosol	32.72	43.24
Solyc03g006950.1.1	Tomato	cytosol, nucleus, peroxisome	30.47	42.94
HORVU7Hr1G008370.1	Barley	cytosol, peroxisome	9.2	42.86
GSMUA_Achr11P...	Banana	cytosol	35.38	42.72
VIT_16s0022g02210.t01	Wine grape	nucleus	32.52	42.51
HORVU7Hr1G008470.2	Barley	cytosol	32.31	42.47
TraesCS7A01G048200.1	Wheat	plastid	31.7	42.35
TraesCS4A01G443500.1	Wheat	mitochondrion	31.7	42.23
TraesCS4A01G443400.1	Wheat	mitochondrion	31.7	42.23
EES01744	Sorghum	plastid	35.17	41.75
OQU78453	Sorghum	nucleus	33.33	41.27
Solyc03g006960.2.1	Tomato	nucleus	31.7	41.22
CDY38877	Canola	cytosol	33.54	40.39
HORVU7Hr1G008560.2	Barley	mitochondrion	19.84	39.92
CDY32620	Canola	cytosol	31.7	39.64
AT5G51760.1	Thale cress	cytosol	33.54	39.42
Bra029160.1-P	Field mustard	cytosol	33.54	39.23
EER92493	Sorghum	nucleus	31.7	38.65
KXG22422	Sorghum	cytosol, nucleus, plastid	29.24	37.63
HORVU7Hr1G008550.1	Barley	cytosol	17.38	37.61
OQU87413	Sorghum	cytosol	28.43	36.29
KXG22152	Sorghum	nucleus	33.13	34.91
KXG22681	Sorghum	cytosol	29.24	33.41
KXG33023	Sorghum	nucleus	31.08	32.07
EES00964	Sorghum	peroxisome, plasma membrane, vacuole	29.45	29.88
OQU90183	Sorghum	mitochondrion	14.11	24.3
OQU86100	Sorghum	nucleus	13.91	17.04
KXG28797	Sorghum	golgi, plasma membrane, vacuole	18.0	8.25

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	UniProt:C5YC95	EnsemblPlants:EES11811	ProteinID:EES11811
ProteinID:EES11811.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009737
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932
InterPro:IPR036457	ProteinID:OQU81150.1	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF391	SMART:SM00332
EnsemblPlantsGene:SORBI_3006G018400	SUPFAM:SSF81606	UniParc:UPI00081AD084	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:-:3076063..3082312

Molecular Weight (calculated)

50933.5 Da

IEP (calculated)

6.192

GRAVY (calculated)

-0.105

Length

489 amino acids

Sequence
(BLAST)

001: MVMASSTGLN VPAGAGGDGV GNPTAAAAAT EECRLRRRRR LETQGSGEAG PSWVRRLRPA AGSRFSPSSS SSSSAQEEEA DPDVQEMELA PLPPPAAAGV
101: GVGVVLQPQP EPEPEPEPEA PPVAAAVAAQ RVWPLAFGSV TMAGRMRIME DTVSLHPNLC YWPADGSPIH FFAVFDGHGG PHVSALCRER MHEFVAEELA
201: KEGAAFLRRR QAAAAASSSS VAAAAPWSDQ AEEERAWRAA LMRSFRRVDA MAPLACACGR VTVTRPTPCG CPLSVSAASA SAAAAAARRN NGIVGSTAVV
301: AILVRGRLVV ANCGDSRAVL CRGPQGTPPV PLSFDHKPNR PDERARIEAA GGQVVFINGY RVRGILAMSR AIGDRLLRRE GVIAEPEITI TERTVEDQCL
401: ILASDGLWDV MDNFIACYVA RQCLEDGNPP PAAAAGGGGG GAPPAAGGVV GPQEDPRCVG AASLLGRLAL GRETEDNISV IVVDLKHRQ

Best Arabidopsis Sequence Match ( AT5G51760.2 )
(BLAST)

001: MRRQAAVFGE PSSSRNRDRT DMEVYSSFDV PLRKQARRSE IGGLPADIGG FLAPPAASSC QKSEAPVWKG EETEDEPLYG IVSVMGRSRK MEDSVTVKPN
101: LCKPEVNRQR PVHFFAVYDG HGGSQVSTLC STTMHTFVKE ELEQNLEEEE EGSENDVVER KWRGVMKRSF KRMDEMATST CVCGTSVPLC NCDPREAAIS
201: GSTAVTAVLT HDHIIVANTG DSRAVLCRNG MAIPLSNDHK PDRPDERARI EAAGGRVLVV DGARVEGILA TSRAIGDRYL KPMVAWEPEV TFMRRESGDE
301: CLVLASDGLW DVLSSQLACD IARFCLREET PSSLDLNRMA QEDDNDGEQN PSRSVLAATL LTRLALGRQS SDNISVVVID LKNSSQ

Arabidopsis Description

AHG1Probable protein phosphatase 2C 75 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.